Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_04631 and GEMAOFIL_04632 are separated by 234 nucleotides GEMAOFIL_04632 and GEMAOFIL_04633 are separated by 111 nucleotides GEMAOFIL_04633 and GEMAOFIL_04634 are separated by 164 nucleotides
GEMAOFIL_04631: GEMAOFIL_04631 - hypothetical protein, at 5,108,212 to 5,109,783
_04631
GEMAOFIL_04632: GEMAOFIL_04632 - tRNA-Lys, at 5,110,018 to 5,110,093
_04632
GEMAOFIL_04633: GEMAOFIL_04633 - 7-carboxy-7-deazaguanine synthase, at 5,110,205 to 5,110,852
_04633
GEMAOFIL_04634: GEMAOFIL_04634 - Cell division coordinator CpoB, at 5,111,017 to 5,111,850
_04634
Position (kb)
5110
5111 Strain fitness (log2 ratio)
-1
0
1
2 at 5109.342 kb on + strand, within GEMAOFIL_04631 at 5109.590 kb on - strand, within GEMAOFIL_04631 at 5109.627 kb on - strand at 5109.816 kb on + strand at 5109.816 kb on + strand at 5109.855 kb on + strand at 5109.856 kb on - strand at 5109.856 kb on - strand at 5109.914 kb on - strand at 5110.110 kb on + strand at 5110.111 kb on - strand at 5110.144 kb on + strand at 5110.184 kb on - strand at 5110.233 kb on + strand at 5110.234 kb on - strand at 5110.234 kb on - strand at 5110.722 kb on + strand, within GEMAOFIL_04633 at 5110.839 kb on - strand at 5110.868 kb on - strand at 5110.941 kb on + strand at 5111.018 kb on + strand at 5111.070 kb on - strand at 5111.077 kb on + strand at 5111.078 kb on - strand at 5111.113 kb on - strand, within GEMAOFIL_04634 at 5111.132 kb on - strand, within GEMAOFIL_04634 at 5111.132 kb on - strand, within GEMAOFIL_04634 at 5111.369 kb on + strand, within GEMAOFIL_04634 at 5111.370 kb on - strand, within GEMAOFIL_04634 at 5111.491 kb on - strand, within GEMAOFIL_04634 at 5111.524 kb on + strand, within GEMAOFIL_04634 at 5111.524 kb on + strand, within GEMAOFIL_04634 at 5111.525 kb on - strand, within GEMAOFIL_04634 at 5111.526 kb on + strand, within GEMAOFIL_04634 at 5111.526 kb on + strand, within GEMAOFIL_04634 at 5111.683 kb on - strand, within GEMAOFIL_04634 at 5111.699 kb on + strand, within GEMAOFIL_04634 at 5111.700 kb on - strand, within GEMAOFIL_04634 at 5111.732 kb on + strand, within GEMAOFIL_04634 at 5111.752 kb on - strand, within GEMAOFIL_04634 at 5111.752 kb on - strand, within GEMAOFIL_04634 at 5111.754 kb on - strand, within GEMAOFIL_04634 at 5111.754 kb on - strand, within GEMAOFIL_04634 at 5111.767 kb on - strand at 5111.821 kb on + strand at 5111.827 kb on + strand at 5111.827 kb on + strand at 5111.828 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 5,109,342 + GEMAOFIL_04631 0.72 -0.1 5,109,590 - GEMAOFIL_04631 0.88 -0.2 5,109,627 - +1.1 5,109,816 + +0.7 5,109,816 + +0.3 5,109,855 + -0.2 5,109,856 - -0.2 5,109,856 - -0.1 5,109,914 - +0.3 5,110,110 + +0.5 5,110,111 - +0.9 5,110,144 + +1.4 5,110,184 - -0.7 5,110,233 + -0.6 5,110,234 - -0.2 5,110,234 - +0.3 5,110,722 + GEMAOFIL_04633 0.80 -0.9 5,110,839 - +0.5 5,110,868 - +0.8 5,110,941 + -0.7 5,111,018 + -0.1 5,111,070 - +0.1 5,111,077 + -0.5 5,111,078 - +0.9 5,111,113 - GEMAOFIL_04634 0.12 +1.8 5,111,132 - GEMAOFIL_04634 0.14 -0.8 5,111,132 - GEMAOFIL_04634 0.14 -0.2 5,111,369 + GEMAOFIL_04634 0.42 +0.2 5,111,370 - GEMAOFIL_04634 0.42 -0.1 5,111,491 - GEMAOFIL_04634 0.57 +0.8 5,111,524 + GEMAOFIL_04634 0.61 -1.7 5,111,524 + GEMAOFIL_04634 0.61 -0.5 5,111,525 - GEMAOFIL_04634 0.61 -0.2 5,111,526 + GEMAOFIL_04634 0.61 -0.1 5,111,526 + GEMAOFIL_04634 0.61 -0.1 5,111,683 - GEMAOFIL_04634 0.80 -0.1 5,111,699 + GEMAOFIL_04634 0.82 -0.1 5,111,700 - GEMAOFIL_04634 0.82 -0.2 5,111,732 + GEMAOFIL_04634 0.86 +0.7 5,111,752 - GEMAOFIL_04634 0.88 -0.4 5,111,752 - GEMAOFIL_04634 0.88 +0.7 5,111,754 - GEMAOFIL_04634 0.88 -0.4 5,111,754 - GEMAOFIL_04634 0.88 -1.4 5,111,767 - -0.4 5,111,821 + +0.3 5,111,827 + -0.3 5,111,827 + -0.2 5,111,828 - -1.4
Or see this region's nucleotide sequence