Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00624 and GEMAOFIL_00625 are separated by 216 nucleotides GEMAOFIL_00625 and GEMAOFIL_00626 overlap by 4 nucleotides GEMAOFIL_00626 and GEMAOFIL_00627 overlap by 4 nucleotides
GEMAOFIL_00624: GEMAOFIL_00624 - Penicillin-binding protein 1A, at 724,192 to 726,654
_00624
GEMAOFIL_00625: GEMAOFIL_00625 - hypothetical protein, at 726,871 to 727,524
_00625
GEMAOFIL_00626: GEMAOFIL_00626 - hypothetical protein, at 727,521 to 728,075
_00626
GEMAOFIL_00627: GEMAOFIL_00627 - hypothetical protein, at 728,072 to 729,043
_00627
Position (kb) 726
727
728 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 725.898 kb on - strand, within GEMAOFIL_00624 at 725.898 kb on - strand, within GEMAOFIL_00624 at 725.963 kb on + strand, within GEMAOFIL_00624 at 725.963 kb on + strand, within GEMAOFIL_00624 at 725.963 kb on + strand, within GEMAOFIL_00624 at 726.104 kb on + strand, within GEMAOFIL_00624 at 726.104 kb on + strand, within GEMAOFIL_00624 at 726.104 kb on + strand, within GEMAOFIL_00624 at 726.105 kb on - strand, within GEMAOFIL_00624 at 726.131 kb on + strand, within GEMAOFIL_00624 at 726.131 kb on + strand, within GEMAOFIL_00624 at 726.165 kb on - strand, within GEMAOFIL_00624 at 726.387 kb on + strand, within GEMAOFIL_00624 at 726.388 kb on - strand, within GEMAOFIL_00624 at 726.500 kb on + strand at 726.501 kb on - strand at 726.528 kb on + strand at 726.528 kb on + strand at 726.534 kb on + strand at 726.534 kb on + strand at 726.535 kb on - strand at 726.564 kb on + strand at 726.565 kb on - strand at 726.687 kb on - strand at 726.736 kb on - strand at 726.736 kb on - strand at 726.843 kb on + strand at 726.876 kb on - strand at 726.973 kb on + strand, within GEMAOFIL_00625 at 726.988 kb on + strand, within GEMAOFIL_00625 at 727.213 kb on + strand, within GEMAOFIL_00625 at 727.222 kb on + strand, within GEMAOFIL_00625 at 727.257 kb on - strand, within GEMAOFIL_00625 at 727.257 kb on - strand, within GEMAOFIL_00625 at 727.295 kb on + strand, within GEMAOFIL_00625 at 727.295 kb on + strand, within GEMAOFIL_00625 at 727.296 kb on - strand, within GEMAOFIL_00625 at 727.475 kb on + strand at 727.475 kb on + strand at 727.475 kb on + strand at 727.475 kb on + strand at 727.476 kb on - strand at 727.476 kb on - strand at 727.476 kb on - strand at 727.476 kb on - strand at 728.314 kb on - strand, within GEMAOFIL_00627 at 728.422 kb on - strand, within GEMAOFIL_00627 at 728.469 kb on - strand, within GEMAOFIL_00627 at 728.469 kb on - strand, within GEMAOFIL_00627
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 725,898 - GEMAOFIL_00624 0.69 -1.1 725,898 - GEMAOFIL_00624 0.69 -0.5 725,963 + GEMAOFIL_00624 0.72 -1.0 725,963 + GEMAOFIL_00624 0.72 -1.2 725,963 + GEMAOFIL_00624 0.72 -0.7 726,104 + GEMAOFIL_00624 0.78 -0.6 726,104 + GEMAOFIL_00624 0.78 -0.5 726,104 + GEMAOFIL_00624 0.78 -0.6 726,105 - GEMAOFIL_00624 0.78 -0.8 726,131 + GEMAOFIL_00624 0.79 -0.5 726,131 + GEMAOFIL_00624 0.79 -0.6 726,165 - GEMAOFIL_00624 0.80 -0.3 726,387 + GEMAOFIL_00624 0.89 -0.3 726,388 - GEMAOFIL_00624 0.89 -0.1 726,500 + -2.9 726,501 - +0.9 726,528 + -0.4 726,528 + -0.4 726,534 + -0.3 726,534 + -2.6 726,535 - -0.8 726,564 + -1.6 726,565 - -0.3 726,687 - +0.6 726,736 - -0.5 726,736 - -0.6 726,843 + +1.1 726,876 - +0.0 726,973 + GEMAOFIL_00625 0.16 +0.2 726,988 + GEMAOFIL_00625 0.18 +0.9 727,213 + GEMAOFIL_00625 0.52 -0.6 727,222 + GEMAOFIL_00625 0.54 +0.2 727,257 - GEMAOFIL_00625 0.59 -0.2 727,257 - GEMAOFIL_00625 0.59 +0.4 727,295 + GEMAOFIL_00625 0.65 +1.4 727,295 + GEMAOFIL_00625 0.65 -0.1 727,296 - GEMAOFIL_00625 0.65 +1.3 727,475 + +0.9 727,475 + +0.4 727,475 + +0.6 727,475 + -0.6 727,476 - -2.2 727,476 - -0.6 727,476 - +0.7 727,476 - +0.8 728,314 - GEMAOFIL_00627 0.25 +0.2 728,422 - GEMAOFIL_00627 0.36 -0.3 728,469 - GEMAOFIL_00627 0.41 -0.4 728,469 - GEMAOFIL_00627 0.41 -0.0
Or see this region's nucleotide sequence