Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_03258 and GEMAOFIL_03259 are separated by 2 nucleotides GEMAOFIL_03259 and GEMAOFIL_03260 are separated by 22 nucleotides GEMAOFIL_03260 and GEMAOFIL_03261 are separated by 36 nucleotides
GEMAOFIL_03258: GEMAOFIL_03258 - Sulfate/thiosulfate import ATP-binding protein CysA, at 3,604,075 to 3,604,851
_03258
GEMAOFIL_03259: GEMAOFIL_03259 - High-affinity branched-chain amino acid transport system permease protein LivH, at 3,604,854 to 3,605,735
_03259
GEMAOFIL_03260: GEMAOFIL_03260 - hypothetical protein, at 3,605,758 to 3,606,825
_03260
GEMAOFIL_03261: GEMAOFIL_03261 - hypothetical protein, at 3,606,862 to 3,608,193
_03261
Position (kb)
3605
3606
3607 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3604.772 kb on - strand, within GEMAOFIL_03258 at 3604.837 kb on + strand at 3604.906 kb on - strand at 3605.662 kb on - strand at 3605.662 kb on - strand at 3605.689 kb on + strand at 3605.794 kb on + strand at 3605.844 kb on - strand at 3605.896 kb on + strand, within GEMAOFIL_03260 at 3606.031 kb on + strand, within GEMAOFIL_03260 at 3606.032 kb on - strand, within GEMAOFIL_03260 at 3606.152 kb on - strand, within GEMAOFIL_03260 at 3606.302 kb on - strand, within GEMAOFIL_03260 at 3606.302 kb on - strand, within GEMAOFIL_03260 at 3606.472 kb on + strand, within GEMAOFIL_03260 at 3606.509 kb on - strand, within GEMAOFIL_03260 at 3606.832 kb on - strand at 3606.875 kb on + strand at 3607.039 kb on + strand, within GEMAOFIL_03261 at 3607.040 kb on - strand, within GEMAOFIL_03261 at 3607.102 kb on + strand, within GEMAOFIL_03261 at 3607.103 kb on - strand, within GEMAOFIL_03261 at 3607.103 kb on - strand, within GEMAOFIL_03261 at 3607.130 kb on - strand, within GEMAOFIL_03261 at 3607.625 kb on - strand, within GEMAOFIL_03261 at 3607.650 kb on + strand, within GEMAOFIL_03261 at 3607.651 kb on - strand, within GEMAOFIL_03261 at 3607.825 kb on + strand, within GEMAOFIL_03261
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 3,604,772 - GEMAOFIL_03258 0.90 +1.4 3,604,837 + -1.2 3,604,906 - -0.3 3,605,662 - +0.2 3,605,662 - +0.1 3,605,689 + -0.2 3,605,794 + +0.4 3,605,844 - +0.8 3,605,896 + GEMAOFIL_03260 0.13 +0.9 3,606,031 + GEMAOFIL_03260 0.26 -0.7 3,606,032 - GEMAOFIL_03260 0.26 +0.3 3,606,152 - GEMAOFIL_03260 0.37 -0.5 3,606,302 - GEMAOFIL_03260 0.51 +0.7 3,606,302 - GEMAOFIL_03260 0.51 +0.8 3,606,472 + GEMAOFIL_03260 0.67 -0.2 3,606,509 - GEMAOFIL_03260 0.70 +0.1 3,606,832 - -1.9 3,606,875 + +1.8 3,607,039 + GEMAOFIL_03261 0.13 -0.9 3,607,040 - GEMAOFIL_03261 0.13 -0.3 3,607,102 + GEMAOFIL_03261 0.18 -2.9 3,607,103 - GEMAOFIL_03261 0.18 +1.0 3,607,103 - GEMAOFIL_03261 0.18 -0.0 3,607,130 - GEMAOFIL_03261 0.20 +0.5 3,607,625 - GEMAOFIL_03261 0.57 +0.2 3,607,650 + GEMAOFIL_03261 0.59 -0.1 3,607,651 - GEMAOFIL_03261 0.59 +0.9 3,607,825 + GEMAOFIL_03261 0.72 +0.0
Or see this region's nucleotide sequence