Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00724 and GEMAOFIL_00725 are separated by 3 nucleotides GEMAOFIL_00725 and GEMAOFIL_00726 are separated by 60 nucleotides GEMAOFIL_00726 and GEMAOFIL_00727 are separated by 286 nucleotides
GEMAOFIL_00724: GEMAOFIL_00724 - Motility protein A, at 847,307 to 848,158
_00724
GEMAOFIL_00725: GEMAOFIL_00725 - Motility protein B, at 848,162 to 849,181
_00725
GEMAOFIL_00726: GEMAOFIL_00726 - hypothetical protein, at 849,242 to 849,637
_00726
GEMAOFIL_00727: GEMAOFIL_00727 - Small ribosomal subunit biogenesis GTPase RsgA, at 849,924 to 850,955
_00727
Position (kb) 848
849
850 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 847.212 kb on + strand at 847.213 kb on - strand at 847.214 kb on + strand at 847.215 kb on - strand at 847.240 kb on + strand at 847.240 kb on + strand at 847.241 kb on - strand at 847.241 kb on - strand at 847.241 kb on - strand at 847.270 kb on - strand at 847.306 kb on + strand at 847.312 kb on + strand at 847.415 kb on - strand, within GEMAOFIL_00724 at 847.460 kb on + strand, within GEMAOFIL_00724 at 847.460 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.679 kb on - strand, within GEMAOFIL_00724 at 847.943 kb on - strand, within GEMAOFIL_00724 at 847.955 kb on + strand, within GEMAOFIL_00724 at 847.956 kb on - strand, within GEMAOFIL_00724 at 847.956 kb on - strand, within GEMAOFIL_00724 at 848.018 kb on + strand, within GEMAOFIL_00724 at 848.018 kb on + strand, within GEMAOFIL_00724 at 848.103 kb on - strand at 848.300 kb on - strand, within GEMAOFIL_00725 at 848.300 kb on - strand, within GEMAOFIL_00725 at 848.337 kb on - strand, within GEMAOFIL_00725 at 848.691 kb on - strand, within GEMAOFIL_00725 at 848.780 kb on + strand, within GEMAOFIL_00725 at 849.179 kb on + strand at 849.179 kb on + strand at 849.179 kb on + strand at 849.255 kb on + strand at 849.256 kb on - strand at 849.256 kb on - strand at 849.262 kb on + strand at 849.263 kb on - strand at 849.263 kb on - strand at 849.263 kb on - strand at 849.378 kb on + strand, within GEMAOFIL_00726 at 849.379 kb on - strand, within GEMAOFIL_00726 at 849.409 kb on + strand, within GEMAOFIL_00726 at 849.409 kb on + strand, within GEMAOFIL_00726 at 849.411 kb on + strand, within GEMAOFIL_00726 at 849.436 kb on + strand, within GEMAOFIL_00726 at 849.437 kb on - strand, within GEMAOFIL_00726 at 849.441 kb on - strand, within GEMAOFIL_00726 at 849.441 kb on - strand, within GEMAOFIL_00726 at 849.547 kb on + strand, within GEMAOFIL_00726 at 849.547 kb on + strand, within GEMAOFIL_00726 at 849.552 kb on - strand, within GEMAOFIL_00726 at 849.624 kb on + strand at 849.624 kb on + strand at 849.624 kb on + strand at 849.627 kb on + strand at 849.628 kb on - strand at 849.866 kb on + strand at 849.879 kb on + strand at 849.879 kb on + strand at 849.901 kb on + strand at 849.902 kb on - strand at 849.907 kb on + strand at 849.964 kb on + strand at 849.964 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 847,212 + -0.1 847,213 - -0.4 847,214 + +1.1 847,215 - -0.1 847,240 + -0.6 847,240 + +0.5 847,241 - -1.2 847,241 - +0.2 847,241 - -0.1 847,270 - -3.1 847,306 + -0.1 847,312 + -0.9 847,415 - GEMAOFIL_00724 0.13 -1.2 847,460 + GEMAOFIL_00724 0.18 -0.9 847,460 + GEMAOFIL_00724 0.18 -0.3 847,676 + GEMAOFIL_00724 0.43 -0.6 847,676 + GEMAOFIL_00724 0.43 -1.0 847,676 + GEMAOFIL_00724 0.43 -0.7 847,676 + GEMAOFIL_00724 0.43 -0.6 847,676 + GEMAOFIL_00724 0.43 -2.0 847,679 - GEMAOFIL_00724 0.44 +0.5 847,943 - GEMAOFIL_00724 0.75 -0.3 847,955 + GEMAOFIL_00724 0.76 +0.1 847,956 - GEMAOFIL_00724 0.76 -0.4 847,956 - GEMAOFIL_00724 0.76 +0.1 848,018 + GEMAOFIL_00724 0.83 +0.0 848,018 + GEMAOFIL_00724 0.83 -0.4 848,103 - -0.0 848,300 - GEMAOFIL_00725 0.14 -0.6 848,300 - GEMAOFIL_00725 0.14 +0.3 848,337 - GEMAOFIL_00725 0.17 -0.6 848,691 - GEMAOFIL_00725 0.52 -1.6 848,780 + GEMAOFIL_00725 0.61 -0.7 849,179 + -0.1 849,179 + -0.3 849,179 + -1.3 849,255 + +1.3 849,256 - -0.3 849,256 - +1.0 849,262 + -0.6 849,263 - +0.7 849,263 - -0.2 849,263 - +0.9 849,378 + GEMAOFIL_00726 0.34 +0.3 849,379 - GEMAOFIL_00726 0.35 -0.8 849,409 + GEMAOFIL_00726 0.42 -0.0 849,409 + GEMAOFIL_00726 0.42 +0.4 849,411 + GEMAOFIL_00726 0.43 +0.1 849,436 + GEMAOFIL_00726 0.49 +0.9 849,437 - GEMAOFIL_00726 0.49 -0.4 849,441 - GEMAOFIL_00726 0.50 -0.6 849,441 - GEMAOFIL_00726 0.50 +0.6 849,547 + GEMAOFIL_00726 0.77 +0.4 849,547 + GEMAOFIL_00726 0.77 +1.0 849,552 - GEMAOFIL_00726 0.78 -0.2 849,624 + +0.2 849,624 + +0.3 849,624 + +0.2 849,627 + +0.6 849,628 - +0.1 849,866 + -0.4 849,879 + -0.3 849,879 + +0.2 849,901 + -0.7 849,902 - +0.4 849,907 + +0.4 849,964 + -1.2 849,964 + -0.5
Or see this region's nucleotide sequence