Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00723 and GEMAOFIL_00724 are separated by 167 nucleotides GEMAOFIL_00724 and GEMAOFIL_00725 are separated by 3 nucleotides
GEMAOFIL_00723: GEMAOFIL_00723 - hypothetical protein, at 845,604 to 847,139
_00723
GEMAOFIL_00724: GEMAOFIL_00724 - Motility protein A, at 847,307 to 848,158
_00724
GEMAOFIL_00725: GEMAOFIL_00725 - Motility protein B, at 848,162 to 849,181
_00725
Position (kb) 847
848
849 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 846.500 kb on + strand, within GEMAOFIL_00723 at 846.500 kb on + strand, within GEMAOFIL_00723 at 846.500 kb on + strand, within GEMAOFIL_00723 at 846.502 kb on + strand, within GEMAOFIL_00723 at 846.786 kb on + strand, within GEMAOFIL_00723 at 847.110 kb on + strand at 847.212 kb on + strand at 847.213 kb on - strand at 847.214 kb on + strand at 847.215 kb on - strand at 847.240 kb on + strand at 847.240 kb on + strand at 847.241 kb on - strand at 847.241 kb on - strand at 847.241 kb on - strand at 847.270 kb on - strand at 847.306 kb on + strand at 847.312 kb on + strand at 847.415 kb on - strand, within GEMAOFIL_00724 at 847.460 kb on + strand, within GEMAOFIL_00724 at 847.460 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.676 kb on + strand, within GEMAOFIL_00724 at 847.679 kb on - strand, within GEMAOFIL_00724 at 847.943 kb on - strand, within GEMAOFIL_00724 at 847.955 kb on + strand, within GEMAOFIL_00724 at 847.956 kb on - strand, within GEMAOFIL_00724 at 847.956 kb on - strand, within GEMAOFIL_00724 at 848.018 kb on + strand, within GEMAOFIL_00724 at 848.018 kb on + strand, within GEMAOFIL_00724 at 848.103 kb on - strand at 848.300 kb on - strand, within GEMAOFIL_00725 at 848.300 kb on - strand, within GEMAOFIL_00725 at 848.337 kb on - strand, within GEMAOFIL_00725 at 848.691 kb on - strand, within GEMAOFIL_00725 at 848.780 kb on + strand, within GEMAOFIL_00725
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 846,500 + GEMAOFIL_00723 0.58 -0.6 846,500 + GEMAOFIL_00723 0.58 -0.5 846,500 + GEMAOFIL_00723 0.58 -1.6 846,502 + GEMAOFIL_00723 0.58 +0.2 846,786 + GEMAOFIL_00723 0.77 +0.6 847,110 + +0.3 847,212 + -0.1 847,213 - -0.4 847,214 + +1.1 847,215 - -0.1 847,240 + -0.6 847,240 + +0.5 847,241 - -1.2 847,241 - +0.2 847,241 - -0.1 847,270 - -3.1 847,306 + -0.1 847,312 + -0.9 847,415 - GEMAOFIL_00724 0.13 -1.2 847,460 + GEMAOFIL_00724 0.18 -0.9 847,460 + GEMAOFIL_00724 0.18 -0.3 847,676 + GEMAOFIL_00724 0.43 -0.6 847,676 + GEMAOFIL_00724 0.43 -1.0 847,676 + GEMAOFIL_00724 0.43 -0.7 847,676 + GEMAOFIL_00724 0.43 -0.6 847,676 + GEMAOFIL_00724 0.43 -2.0 847,679 - GEMAOFIL_00724 0.44 +0.5 847,943 - GEMAOFIL_00724 0.75 -0.3 847,955 + GEMAOFIL_00724 0.76 +0.1 847,956 - GEMAOFIL_00724 0.76 -0.4 847,956 - GEMAOFIL_00724 0.76 +0.1 848,018 + GEMAOFIL_00724 0.83 +0.0 848,018 + GEMAOFIL_00724 0.83 -0.4 848,103 - -0.0 848,300 - GEMAOFIL_00725 0.14 -0.6 848,300 - GEMAOFIL_00725 0.14 +0.3 848,337 - GEMAOFIL_00725 0.17 -0.6 848,691 - GEMAOFIL_00725 0.52 -1.6 848,780 + GEMAOFIL_00725 0.61 -0.7
Or see this region's nucleotide sequence