Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00014 and GEMAOFIL_00015 overlap by 4 nucleotides GEMAOFIL_00015 and GEMAOFIL_00016 are separated by 85 nucleotides
GEMAOFIL_00014: GEMAOFIL_00014 - Cardiolipin synthase C, at 13,201 to 14,706
_00014
GEMAOFIL_00015: GEMAOFIL_00015 - putative MFS-type transporter YcaD, at 14,703 to 15,845
_00015
GEMAOFIL_00016: GEMAOFIL_00016 - NADP/NAD-dependent aldehyde dehydrogenase PuuC, at 15,931 to 17,424
_00016
Position (kb) 14
15
16 Strain fitness (log2 ratio) -2
-1
0
1
2 at 13.708 kb on + strand, within GEMAOFIL_00014 at 13.708 kb on + strand, within GEMAOFIL_00014 at 13.708 kb on + strand, within GEMAOFIL_00014 at 13.708 kb on + strand, within GEMAOFIL_00014 at 13.708 kb on + strand, within GEMAOFIL_00014 at 13.709 kb on - strand, within GEMAOFIL_00014 at 13.709 kb on - strand, within GEMAOFIL_00014 at 13.709 kb on - strand, within GEMAOFIL_00014 at 13.801 kb on + strand, within GEMAOFIL_00014 at 13.802 kb on - strand, within GEMAOFIL_00014 at 13.933 kb on + strand, within GEMAOFIL_00014 at 13.933 kb on + strand, within GEMAOFIL_00014 at 13.933 kb on + strand, within GEMAOFIL_00014 at 14.135 kb on - strand, within GEMAOFIL_00014 at 14.299 kb on + strand, within GEMAOFIL_00014 at 14.561 kb on - strand at 14.941 kb on - strand, within GEMAOFIL_00015 at 15.074 kb on - strand, within GEMAOFIL_00015 at 15.074 kb on - strand, within GEMAOFIL_00015 at 15.178 kb on + strand, within GEMAOFIL_00015 at 15.178 kb on + strand, within GEMAOFIL_00015 at 15.178 kb on + strand, within GEMAOFIL_00015 at 15.179 kb on - strand, within GEMAOFIL_00015 at 15.179 kb on - strand, within GEMAOFIL_00015 at 15.179 kb on - strand, within GEMAOFIL_00015 at 15.333 kb on + strand, within GEMAOFIL_00015 at 15.436 kb on + strand, within GEMAOFIL_00015 at 15.436 kb on + strand, within GEMAOFIL_00015 at 15.436 kb on + strand, within GEMAOFIL_00015 at 15.448 kb on + strand, within GEMAOFIL_00015 at 15.739 kb on + strand at 15.807 kb on + strand at 15.807 kb on + strand at 15.807 kb on + strand at 15.829 kb on + strand at 15.830 kb on - strand at 15.830 kb on - strand at 15.875 kb on + strand at 15.876 kb on - strand at 15.933 kb on - strand at 15.933 kb on - strand at 15.966 kb on - strand at 16.052 kb on + strand at 16.113 kb on + strand, within GEMAOFIL_00016 at 16.114 kb on - strand, within GEMAOFIL_00016 at 16.145 kb on + strand, within GEMAOFIL_00016 at 16.145 kb on + strand, within GEMAOFIL_00016 at 16.145 kb on + strand, within GEMAOFIL_00016 at 16.146 kb on - strand, within GEMAOFIL_00016 at 16.146 kb on - strand, within GEMAOFIL_00016 at 16.146 kb on - strand, within GEMAOFIL_00016 at 16.194 kb on + strand, within GEMAOFIL_00016 at 16.194 kb on + strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.281 kb on - strand, within GEMAOFIL_00016 at 16.281 kb on - strand, within GEMAOFIL_00016 at 16.281 kb on - strand, within GEMAOFIL_00016 at 16.602 kb on + strand, within GEMAOFIL_00016 at 16.633 kb on + strand, within GEMAOFIL_00016 at 16.634 kb on - strand, within GEMAOFIL_00016 at 16.634 kb on - strand, within GEMAOFIL_00016 at 16.634 kb on - strand, within GEMAOFIL_00016
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 13,708 + GEMAOFIL_00014 0.34 -0.4 13,708 + GEMAOFIL_00014 0.34 +0.2 13,708 + GEMAOFIL_00014 0.34 +0.3 13,708 + GEMAOFIL_00014 0.34 -0.1 13,708 + GEMAOFIL_00014 0.34 -1.5 13,709 - GEMAOFIL_00014 0.34 +0.0 13,709 - GEMAOFIL_00014 0.34 +0.6 13,709 - GEMAOFIL_00014 0.34 +0.4 13,801 + GEMAOFIL_00014 0.40 -0.4 13,802 - GEMAOFIL_00014 0.40 +0.8 13,933 + GEMAOFIL_00014 0.49 -0.2 13,933 + GEMAOFIL_00014 0.49 +0.4 13,933 + GEMAOFIL_00014 0.49 +0.2 14,135 - GEMAOFIL_00014 0.62 +1.1 14,299 + GEMAOFIL_00014 0.73 -0.2 14,561 - -0.5 14,941 - GEMAOFIL_00015 0.21 +0.0 15,074 - GEMAOFIL_00015 0.32 -0.0 15,074 - GEMAOFIL_00015 0.32 -0.0 15,178 + GEMAOFIL_00015 0.42 +0.4 15,178 + GEMAOFIL_00015 0.42 +1.8 15,178 + GEMAOFIL_00015 0.42 +0.4 15,179 - GEMAOFIL_00015 0.42 -0.5 15,179 - GEMAOFIL_00015 0.42 +0.6 15,179 - GEMAOFIL_00015 0.42 -0.2 15,333 + GEMAOFIL_00015 0.55 +0.2 15,436 + GEMAOFIL_00015 0.64 +1.0 15,436 + GEMAOFIL_00015 0.64 -0.1 15,436 + GEMAOFIL_00015 0.64 -0.2 15,448 + GEMAOFIL_00015 0.65 -0.0 15,739 + +0.1 15,807 + +0.1 15,807 + -0.2 15,807 + +0.3 15,829 + +0.0 15,830 - +0.4 15,830 - +0.5 15,875 + +0.0 15,876 - +0.0 15,933 - -1.9 15,933 - +0.1 15,966 - -0.5 16,052 + +0.2 16,113 + GEMAOFIL_00016 0.12 -0.6 16,114 - GEMAOFIL_00016 0.12 -0.1 16,145 + GEMAOFIL_00016 0.14 -0.5 16,145 + GEMAOFIL_00016 0.14 +0.2 16,145 + GEMAOFIL_00016 0.14 +0.0 16,146 - GEMAOFIL_00016 0.14 -0.1 16,146 - GEMAOFIL_00016 0.14 -0.1 16,146 - GEMAOFIL_00016 0.14 -0.4 16,194 + GEMAOFIL_00016 0.18 +0.2 16,194 + GEMAOFIL_00016 0.18 +0.2 16,195 - GEMAOFIL_00016 0.18 -1.0 16,195 - GEMAOFIL_00016 0.18 -0.9 16,195 - GEMAOFIL_00016 0.18 +0.1 16,195 - GEMAOFIL_00016 0.18 +1.4 16,195 - GEMAOFIL_00016 0.18 -0.2 16,281 - GEMAOFIL_00016 0.23 +0.2 16,281 - GEMAOFIL_00016 0.23 +0.4 16,281 - GEMAOFIL_00016 0.23 +0.1 16,602 + GEMAOFIL_00016 0.45 -0.1 16,633 + GEMAOFIL_00016 0.47 -1.9 16,634 - GEMAOFIL_00016 0.47 +0.7 16,634 - GEMAOFIL_00016 0.47 -0.1 16,634 - GEMAOFIL_00016 0.47 +0.3
Or see this region's nucleotide sequence