Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00703 and GEMAOFIL_00704 are separated by 54 nucleotides GEMAOFIL_00704 and GEMAOFIL_00705 are separated by 103 nucleotides GEMAOFIL_00705 and GEMAOFIL_00706 are separated by 23 nucleotides
GEMAOFIL_00703: GEMAOFIL_00703 - putative FAD-dependent oxidoreductase, at 821,947 to 823,116
_00703
GEMAOFIL_00704: GEMAOFIL_00704 - Multidrug transporter, at 823,171 to 823,506
_00704
GEMAOFIL_00705: GEMAOFIL_00705 - HTH-type transcriptional regulator HdfR, at 823,610 to 824,500
_00705
GEMAOFIL_00706: GEMAOFIL_00706 - 3-deoxy-D-manno-octulosonic acid transferase, at 824,524 to 825,801
_00706
Position (kb) 823
824
825 Strain fitness (log2 ratio) -2
-1
0
1 at 823.152 kb on - strand at 823.155 kb on - strand at 823.173 kb on - strand at 823.347 kb on + strand, within GEMAOFIL_00704 at 823.488 kb on - strand at 823.490 kb on + strand at 823.490 kb on + strand at 823.490 kb on + strand at 823.491 kb on - strand at 823.491 kb on - strand at 823.492 kb on - strand at 823.493 kb on + strand at 823.493 kb on + strand at 823.493 kb on + strand at 823.494 kb on - strand at 823.494 kb on - strand at 823.494 kb on - strand at 823.494 kb on - strand at 823.494 kb on - strand at 823.771 kb on + strand, within GEMAOFIL_00705 at 824.067 kb on - strand, within GEMAOFIL_00705 at 824.164 kb on + strand, within GEMAOFIL_00705 at 824.279 kb on + strand, within GEMAOFIL_00705 at 824.279 kb on + strand, within GEMAOFIL_00705 at 824.280 kb on - strand, within GEMAOFIL_00705 at 824.280 kb on - strand, within GEMAOFIL_00705 at 824.280 kb on - strand, within GEMAOFIL_00705 at 824.280 kb on - strand, within GEMAOFIL_00705 at 824.280 kb on - strand, within GEMAOFIL_00705 at 824.283 kb on + strand, within GEMAOFIL_00705 at 824.283 kb on + strand, within GEMAOFIL_00705 at 824.283 kb on + strand, within GEMAOFIL_00705 at 824.284 kb on - strand, within GEMAOFIL_00705 at 824.511 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 823,152 - +1.1 823,155 - +0.6 823,173 - +0.3 823,347 + GEMAOFIL_00704 0.52 -0.4 823,488 - +0.9 823,490 + -0.0 823,490 + +0.1 823,490 + -1.4 823,491 - +0.1 823,491 - -0.4 823,492 - -0.3 823,493 + -0.7 823,493 + -0.0 823,493 + +0.6 823,494 - +0.1 823,494 - -0.7 823,494 - -0.2 823,494 - -2.7 823,494 - +0.6 823,771 + GEMAOFIL_00705 0.18 -0.3 824,067 - GEMAOFIL_00705 0.51 -0.5 824,164 + GEMAOFIL_00705 0.62 -0.1 824,279 + GEMAOFIL_00705 0.75 -0.6 824,279 + GEMAOFIL_00705 0.75 -1.7 824,280 - GEMAOFIL_00705 0.75 -0.7 824,280 - GEMAOFIL_00705 0.75 +0.1 824,280 - GEMAOFIL_00705 0.75 -0.8 824,280 - GEMAOFIL_00705 0.75 +0.8 824,280 - GEMAOFIL_00705 0.75 +0.1 824,283 + GEMAOFIL_00705 0.76 -0.1 824,283 + GEMAOFIL_00705 0.76 +0.3 824,283 + GEMAOFIL_00705 0.76 +0.2 824,284 - GEMAOFIL_00705 0.76 -1.0 824,511 - +0.6
Or see this region's nucleotide sequence