Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04480

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
846,833	+		MPMX19_04479	0.50	-0.7
846,834	-		MPMX19_04479	0.50	+1.0
846,834	-		MPMX19_04479	0.50	+0.6
846,834	-		MPMX19_04479	0.50	-0.7
846,884	+		MPMX19_04479	0.54	+1.2
846,885	-		MPMX19_04479	0.54	-0.8
846,885	-		MPMX19_04479	0.54	-0.7
846,885	-		MPMX19_04479	0.54	-2.3
846,885	-		MPMX19_04479	0.54	-0.9
846,885	-		MPMX19_04479	0.54	-1.4
847,040	+		MPMX19_04479	0.69	+0.4
847,040	+		MPMX19_04479	0.69	+0.7
847,040	+		MPMX19_04479	0.69	-0.5
847,040	+		MPMX19_04479	0.69	-1.4
847,040	+		MPMX19_04479	0.69	-0.7
847,040	+		MPMX19_04479	0.69	-0.5
847,041	-		MPMX19_04479	0.69	-0.2
847,041	-		MPMX19_04479	0.69	+0.2
847,041	-		MPMX19_04479	0.69	+0.3
847,041	-		MPMX19_04479	0.69	-0.4
847,041	-		MPMX19_04479	0.69	-1.1
847,041	-		MPMX19_04479	0.69	+0.3
847,041	-		MPMX19_04479	0.69	+0.8
847,041	-		MPMX19_04479	0.69	-0.4
847,076	+		MPMX19_04479	0.72	-0.8
847,076	+		MPMX19_04479	0.72	-1.0
847,076	+		MPMX19_04479	0.72	+0.2
847,076	+		MPMX19_04479	0.72	-0.0
847,076	+		MPMX19_04479	0.72	-1.6
847,076	+		MPMX19_04479	0.72	-1.2
847,077	-		MPMX19_04479	0.72	+0.6
847,077	-		MPMX19_04479	0.72	-0.6
847,077	-		MPMX19_04479	0.72	-0.6
847,077	-		MPMX19_04479	0.72	-0.7
847,077	-		MPMX19_04479	0.72	-1.7
847,077	-		MPMX19_04479	0.72	+2.6
847,077	-		MPMX19_04479	0.72	-0.4
847,078	+		MPMX19_04479	0.72	-0.0
847,078	+		MPMX19_04479	0.72	+0.7
847,078	+		MPMX19_04479	0.72	-0.5
847,078	+		MPMX19_04479	0.72	-0.4
847,079	-		MPMX19_04479	0.72	-0.2
847,079	-		MPMX19_04479	0.72	-1.6
847,079	-		MPMX19_04479	0.72	-1.5
847,079	-		MPMX19_04479	0.72	+0.6
847,079	-		MPMX19_04479	0.72	-0.6
847,079	-		MPMX19_04479	0.72	-1.2
847,133	+		MPMX19_04479	0.77	-0.9
847,133	+		MPMX19_04479	0.77	-0.8
847,133	+		MPMX19_04479	0.77	+0.3
847,134	-		MPMX19_04479	0.77	-0.7
847,134	-		MPMX19_04479	0.77	+0.6
847,134	-		MPMX19_04479	0.77	+0.3
847,134	-		MPMX19_04479	0.77	-1.3
847,328	+				-1.0
847,328	+				-2.1
847,329	-				+1.2
847,329	-				-1.2
847,329	-				-0.0
847,349	+				-0.7
847,349	+				-0.3
847,349	+				-2.1
847,350	-				-0.3
847,350	-				-0.4
847,492	+				-1.0
847,492	+				+0.4
847,493	-				-0.7
847,493	-				+0.1
847,493	-				-0.1
847,654	-				-0.1
848,103	+		MPMX19_04480	0.50	-0.5
848,103	+		MPMX19_04480	0.50	+0.6
848,103	+		MPMX19_04480	0.50	-0.7
848,104	-		MPMX19_04480	0.50	+1.0
848,104	-		MPMX19_04480	0.50	-0.3
848,104	-		MPMX19_04480	0.50	-0.7
848,104	-		MPMX19_04480	0.50	+1.2
848,104	-		MPMX19_04480	0.50	+0.0
848,104	-		MPMX19_04480	0.50	+0.1
848,187	+		MPMX19_04480	0.58	+0.3
848,187	+		MPMX19_04480	0.58	+1.6
848,187	+		MPMX19_04480	0.58	-1.2
848,187	+		MPMX19_04480	0.58	-0.2
848,187	+		MPMX19_04480	0.58	-0.8
848,187	+		MPMX19_04480	0.58	-0.6
848,187	+		MPMX19_04480	0.58	+0.5
848,187	+		MPMX19_04480	0.58	-0.6
848,188	-		MPMX19_04480	0.58	-0.5
848,188	-		MPMX19_04480	0.58	-0.9
848,188	-		MPMX19_04480	0.58	-0.0
848,188	-		MPMX19_04480	0.58	+0.6
848,189	+		MPMX19_04480	0.58	-0.7
848,189	+		MPMX19_04480	0.58	-0.4
848,189	+		MPMX19_04480	0.58	+1.1
848,189	+		MPMX19_04480	0.58	+0.4
848,189	+		MPMX19_04480	0.58	-1.2
848,189	+		MPMX19_04480	0.58	+0.4
848,189	+		MPMX19_04480	0.58	+0.4
848,189	+		MPMX19_04480	0.58	+0.3
848,189	+		MPMX19_04480	0.58	+0.4
848,189	+		MPMX19_04480	0.58	+1.9
848,189	+		MPMX19_04480	0.58	-2.0
848,189	+		MPMX19_04480	0.58	+0.7
848,190	-		MPMX19_04480	0.58	-0.0
848,190	-		MPMX19_04480	0.58	+1.0
848,190	-		MPMX19_04480	0.58	-1.0
848,190	-		MPMX19_04480	0.58	-1.0
848,190	-		MPMX19_04480	0.58	-0.7
848,223	+		MPMX19_04480	0.62	-2.2
848,223	+		MPMX19_04480	0.62	+0.3
848,224	-		MPMX19_04480	0.62	+0.2
848,224	-		MPMX19_04480	0.62	-1.3
848,224	-		MPMX19_04480	0.62	+0.5
848,370	-		MPMX19_04480	0.76	+0.3
848,381	+		MPMX19_04480	0.77	-0.0
848,381	+		MPMX19_04480	0.77	-0.2
848,381	+		MPMX19_04480	0.77	+0.4
848,381	+		MPMX19_04480	0.77	+0.3
848,382	-		MPMX19_04480	0.78	-1.0
848,428	-		MPMX19_04480	0.82	+0.2
848,498	+		MPMX19_04480	0.89	-0.2
848,498	+		MPMX19_04480	0.89	+0.7
848,498	+		MPMX19_04480	0.89	+0.1
848,498	+		MPMX19_04480	0.89	-0.6
848,498	+		MPMX19_04480	0.89	-2.0
848,498	+		MPMX19_04480	0.89	+1.6
848,498	+		MPMX19_04480	0.89	-0.6
848,498	+		MPMX19_04480	0.89	-2.2
848,498	+		MPMX19_04480	0.89	+0.6
848,498	+		MPMX19_04480	0.89	+3.2
848,498	+		MPMX19_04480	0.89	+0.1
848,498	+		MPMX19_04480	0.89	-0.8
848,498	+		MPMX19_04480	0.89	-2.2
848,499	-		MPMX19_04480	0.89	+1.6
848,499	-		MPMX19_04480	0.89	-0.3
848,499	-		MPMX19_04480	0.89	-1.1
848,499	-		MPMX19_04480	0.89	+0.1
848,499	-		MPMX19_04480	0.89	-0.7
848,499	-		MPMX19_04480	0.89	+1.0
848,499	-		MPMX19_04480	0.89	+1.3
848,499	-		MPMX19_04480	0.89	-1.2
848,499	-		MPMX19_04480	0.89	+1.6
848,499	-		MPMX19_04480	0.89	+0.2
848,499	-		MPMX19_04480	0.89	-1.4
848,499	-		MPMX19_04480	0.89	-1.4
848,499	-		MPMX19_04480	0.89	-0.1
848,556	+				-0.2
848,556	+				-0.3
848,556	+				+0.5
848,556	+				-1.4
848,556	+				-1.3
848,556	+				-1.8
848,557	-				-0.6
848,557	-				-0.7
848,557	-				+0.1
848,557	-				+0.6
848,583	-				+2.6
848,583	-				-0.0
848,657	+				-0.5
848,658	-				-0.0
848,658	-				-1.6
848,658	-				+0.3
848,901	+		MPMX19_04481	0.10	-0.0
848,902	-		MPMX19_04481	0.10	-1.6
848,902	-		MPMX19_04481	0.10	-0.7
849,027	+		MPMX19_04481	0.31	-0.8
849,027	+		MPMX19_04481	0.31	+1.1
849,027	+		MPMX19_04481	0.31	+1.0
849,027	+		MPMX19_04481	0.31	+0.3
849,027	+		MPMX19_04481	0.31	-0.0
849,027	+		MPMX19_04481	0.31	+0.7
849,027	+		MPMX19_04481	0.31	-1.3
849,027	+		MPMX19_04481	0.31	+0.7
849,027	+		MPMX19_04481	0.31	-1.3
849,027	+		MPMX19_04481	0.31	+0.2
849,027	+		MPMX19_04481	0.31	-1.2
849,027	+		MPMX19_04481	0.31	-0.0
849,027	+		MPMX19_04481	0.31	-0.3
849,027	+		MPMX19_04481	0.31	-0.6
849,027	+		MPMX19_04481	0.31	-0.9
849,027	+		MPMX19_04481	0.31	+0.3
849,028	-		MPMX19_04481	0.31	-1.1
849,028	-		MPMX19_04481	0.31	-0.3
849,028	-		MPMX19_04481	0.31	-0.2
849,028	-		MPMX19_04481	0.31	+0.0
849,028	-		MPMX19_04481	0.31	-1.0
849,028	-		MPMX19_04481	0.31	-0.6
849,028	-		MPMX19_04481	0.31	+0.6
849,028	-		MPMX19_04481	0.31	-1.0
849,028	-		MPMX19_04481	0.31	-0.7
849,028	-		MPMX19_04481	0.31	+1.0
849,028	-		MPMX19_04481	0.31	-1.4
849,245	+		MPMX19_04481	0.67	-0.9
849,246	-		MPMX19_04481	0.67	-0.0
849,425	+				-2.1
849,425	+				-0.6
849,425	+				-0.4
849,425	+				-1.0
849,425	+				-1.6
849,425	+				+0.4
849,425	+				+0.2
849,425	+				+1.3
849,425	+				+0.9
849,425	+				-0.0
849,425	+				-0.4
849,426	-				+1.4
849,426	-				-0.5
849,426	-				-0.6
849,426	-				-0.7
849,426	-				-2.0
849,426	-				-0.2
849,426	-				-0.1
849,426	-				-0.9
849,426	-				-1.0
849,426	-				-0.2
849,426	-				+0.7
849,426	-				-0.8
849,426	-				-1.0
849,426	-				+0.4
849,426	-				-0.2
849,426	-				-0.4
849,426	-				-0.4
849,426	-				-0.0
849,426	-				-0.6
849,448	+				-1.2
849,448	+				-0.0
849,449	-				-1.6
849,496	+				-0.5
849,496	+				-0.3
849,496	+				+0.6
849,497	-				-0.5
849,497	-				+0.2
849,497	-				+0.6
849,497	-				+0.2
849,497	-				-1.4
849,497	-				-1.0
849,497	-				-1.3
849,497	-				-1.4