Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03644

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,079,452	+		MPMX19_03643	0.57	-0.8
1,079,452	+		MPMX19_03643	0.57	-1.7
1,079,453	-		MPMX19_03643	0.57	+1.3
1,079,484	+		MPMX19_03643	0.59	-0.7
1,079,484	+		MPMX19_03643	0.59	+0.7
1,079,484	+		MPMX19_03643	0.59	-0.7
1,079,484	+		MPMX19_03643	0.59	-2.0
1,079,484	+		MPMX19_03643	0.59	+0.8
1,079,485	-		MPMX19_03643	0.59	-0.5
1,079,485	-		MPMX19_03643	0.59	+0.2
1,079,485	-		MPMX19_03643	0.59	-2.0
1,079,485	-		MPMX19_03643	0.59	+0.7
1,079,485	-		MPMX19_03643	0.59	-0.2
1,079,485	-		MPMX19_03643	0.59	+0.4
1,079,485	-		MPMX19_03643	0.59	-0.2
1,079,485	-		MPMX19_03643	0.59	-0.0
1,079,485	-		MPMX19_03643	0.59	-0.4
1,079,554	+		MPMX19_03643	0.62	-0.1
1,079,554	+		MPMX19_03643	0.62	-0.9
1,079,554	+		MPMX19_03643	0.62	+0.4
1,079,554	+		MPMX19_03643	0.62	+1.0
1,079,555	-		MPMX19_03643	0.62	-0.4
1,079,555	-		MPMX19_03643	0.62	-0.8
1,079,555	-		MPMX19_03643	0.62	-0.6
1,079,555	-		MPMX19_03643	0.62	-0.1
1,079,610	+		MPMX19_03643	0.65	-0.1
1,079,611	-		MPMX19_03643	0.65	+0.6
1,079,868	+		MPMX19_03643	0.78	+2.1
1,079,868	+		MPMX19_03643	0.78	-0.1
1,079,869	-		MPMX19_03643	0.78	-0.2
1,079,869	-		MPMX19_03643	0.78	+0.5
1,079,944	+		MPMX19_03643	0.82	-0.5
1,079,944	+		MPMX19_03643	0.82	-0.2
1,079,944	+		MPMX19_03643	0.82	-0.1
1,079,944	+		MPMX19_03643	0.82	+1.4
1,079,944	+		MPMX19_03643	0.82	-0.0
1,079,944	+		MPMX19_03643	0.82	+1.2
1,079,944	+		MPMX19_03643	0.82	-0.7
1,079,944	+		MPMX19_03643	0.82	+0.9
1,079,944	+		MPMX19_03643	0.82	-0.2
1,079,944	+		MPMX19_03643	0.82	-1.0
1,079,944	+		MPMX19_03643	0.82	-1.1
1,079,944	+		MPMX19_03643	0.82	-1.7
1,079,944	+		MPMX19_03643	0.82	+0.2
1,079,944	+		MPMX19_03643	0.82	-0.1
1,079,944	+		MPMX19_03643	0.82	-1.7
1,079,944	+		MPMX19_03643	0.82	-1.7
1,079,944	+		MPMX19_03643	0.82	+0.2
1,079,944	+		MPMX19_03643	0.82	+0.6
1,079,944	+		MPMX19_03643	0.82	+0.7
1,079,944	+		MPMX19_03643	0.82	+1.7
1,079,944	+		MPMX19_03643	0.82	-0.6
1,079,944	+		MPMX19_03643	0.82	+0.1
1,079,944	+		MPMX19_03643	0.82	-0.6
1,079,944	+		MPMX19_03643	0.82	-1.8
1,079,944	+		MPMX19_03643	0.82	+0.2
1,079,944	+		MPMX19_03643	0.82	-0.3
1,079,944	+		MPMX19_03643	0.82	-1.3
1,079,944	+		MPMX19_03643	0.82	-0.7
1,079,944	+		MPMX19_03643	0.82	+0.8
1,079,945	-		MPMX19_03643	0.82	-3.0
1,079,945	-		MPMX19_03643	0.82	+1.1
1,079,945	-		MPMX19_03643	0.82	-0.2
1,079,945	-		MPMX19_03643	0.82	+0.4
1,079,945	-		MPMX19_03643	0.82	+0.4
1,079,945	-		MPMX19_03643	0.82	-1.2
1,079,945	-		MPMX19_03643	0.82	-1.8
1,079,945	-		MPMX19_03643	0.82	-1.7
1,079,945	-		MPMX19_03643	0.82	+0.7
1,079,945	-		MPMX19_03643	0.82	+0.3
1,079,945	-		MPMX19_03643	0.82	-1.3
1,079,945	-		MPMX19_03643	0.82	+0.9
1,079,945	-		MPMX19_03643	0.82	+0.4
1,079,945	-		MPMX19_03643	0.82	+0.3
1,079,945	-		MPMX19_03643	0.82	+0.7
1,079,945	-		MPMX19_03643	0.82	+1.7
1,079,945	-		MPMX19_03643	0.82	-1.1
1,079,945	-		MPMX19_03643	0.82	+0.9
1,079,945	-		MPMX19_03643	0.82	-0.2
1,079,945	-		MPMX19_03643	0.82	+0.1
1,079,945	-		MPMX19_03643	0.82	-0.2
1,079,946	+		MPMX19_03643	0.82	-0.7
1,079,947	-		MPMX19_03643	0.83	+0.7
1,079,947	-		MPMX19_03643	0.83	-0.1
1,079,947	-		MPMX19_03643	0.83	-0.5
1,080,051	+		MPMX19_03643	0.88	+0.0
1,080,051	+		MPMX19_03643	0.88	+0.9
1,080,051	+		MPMX19_03643	0.88	+0.7
1,080,051	+		MPMX19_03643	0.88	-0.4
1,080,051	+		MPMX19_03643	0.88	-1.5
1,080,051	+		MPMX19_03643	0.88	-0.6
1,080,051	+		MPMX19_03643	0.88	-0.7
1,080,051	+		MPMX19_03643	0.88	-0.8
1,080,051	+		MPMX19_03643	0.88	+0.3
1,080,051	+		MPMX19_03643	0.88	-1.1
1,080,051	+		MPMX19_03643	0.88	-0.7
1,080,051	+		MPMX19_03643	0.88	-0.6
1,080,051	+		MPMX19_03643	0.88	-0.5
1,080,051	+		MPMX19_03643	0.88	-1.9
1,080,051	+		MPMX19_03643	0.88	-0.4
1,080,051	+		MPMX19_03643	0.88	+0.1
1,080,052	-		MPMX19_03643	0.88	-0.3
1,080,052	-		MPMX19_03643	0.88	-0.9
1,080,052	-		MPMX19_03643	0.88	-0.3
1,080,052	-		MPMX19_03643	0.88	+0.9
1,080,052	-		MPMX19_03643	0.88	-0.1
1,080,052	-		MPMX19_03643	0.88	+0.7
1,080,052	-		MPMX19_03643	0.88	+0.5
1,080,052	-		MPMX19_03643	0.88	-1.1
1,080,052	-		MPMX19_03643	0.88	+0.2
1,080,052	-		MPMX19_03643	0.88	-0.3
1,080,052	-		MPMX19_03643	0.88	+0.3
1,080,052	-		MPMX19_03643	0.88	-0.8
1,080,329	+				-0.1
1,080,329	+				-1.9
1,080,329	+				+0.2
1,080,329	+				-0.3
1,080,329	+				-1.2
1,080,329	+				+0.1
1,080,330	-				+0.5
1,080,330	-				+0.1
1,080,330	-				-0.5
1,080,330	-				-0.1
1,080,330	-				+0.5
1,080,330	-				-0.9
1,080,330	-				+2.5
1,080,330	-				+1.3
1,080,331	+				+0.1
1,080,331	+				-0.4
1,080,331	+				-0.6
1,080,331	+				-0.5
1,080,331	+				-1.3
1,080,331	+				-0.7
1,080,331	+				+1.2
1,080,331	+				-0.2
1,080,332	-				-0.1
1,080,332	-				+1.1
1,080,332	-				+0.2
1,080,332	-				-0.7
1,080,332	-				+1.0
1,080,332	-				-0.3
1,080,332	-				-0.7
1,080,332	-				-0.2
1,080,332	-				-0.9
1,080,332	-				-0.2
1,080,358	-				-0.0
1,080,377	+				+0.7
1,080,381	+				-0.1
1,080,381	+				+0.1
1,080,381	+				-2.0
1,080,381	+				+0.5
1,080,381	+				+0.3
1,080,382	-				+1.7
1,080,382	-				+0.9
1,080,382	-				+1.0
1,080,382	-				+1.7
1,080,382	-				-1.7
1,080,382	-				-1.0
1,080,382	-				-1.1
1,080,775	-				+0.3
1,080,966	+				-0.5
1,080,967	-				-1.7
1,080,967	-				-1.2
1,081,006	+				-0.9
1,081,125	+				-0.1
1,081,125	+				+0.1
1,081,125	+				-0.7
1,081,125	+				+0.7
1,081,125	+				-1.4
1,081,125	+				-0.7
1,081,126	-				+0.8
1,081,302	+		MPMX19_03645	0.17	-1.7
1,081,302	+		MPMX19_03645	0.17	-0.9
1,081,302	+		MPMX19_03645	0.17	+0.2
1,081,302	+		MPMX19_03645	0.17	+0.3
1,081,302	+		MPMX19_03645	0.17	-0.2
1,081,302	+		MPMX19_03645	0.17	-0.6
1,081,303	-		MPMX19_03645	0.17	+1.9
1,081,303	-		MPMX19_03645	0.17	-0.1
1,081,303	-		MPMX19_03645	0.17	+1.0
1,081,303	-		MPMX19_03645	0.17	-1.8
1,081,303	-		MPMX19_03645	0.17	-0.0
1,081,303	-		MPMX19_03645	0.17	-0.1
1,081,303	-		MPMX19_03645	0.17	+0.3
1,081,303	-		MPMX19_03645	0.17	+1.7
1,081,303	-		MPMX19_03645	0.17	-0.9
1,081,303	-		MPMX19_03645	0.17	+0.2
1,081,303	-		MPMX19_03645	0.17	+0.8
1,081,303	-		MPMX19_03645	0.17	+0.4
1,081,303	-		MPMX19_03645	0.17	+0.1
1,081,303	-		MPMX19_03645	0.17	+0.1
1,081,303	-		MPMX19_03645	0.17	-1.1
1,081,303	-		MPMX19_03645	0.17	+0.1
1,081,338	+		MPMX19_03645	0.19	-1.7
1,081,338	+		MPMX19_03645	0.19	-0.1
1,081,338	+		MPMX19_03645	0.19	-0.3
1,081,338	+		MPMX19_03645	0.19	-0.7
1,081,338	+		MPMX19_03645	0.19	+0.7
1,081,338	+		MPMX19_03645	0.19	-0.8
1,081,338	+		MPMX19_03645	0.19	-0.8
1,081,339	-		MPMX19_03645	0.19	-0.1
1,081,339	-		MPMX19_03645	0.19	+0.7
1,081,339	-		MPMX19_03645	0.19	+0.7
1,081,339	-		MPMX19_03645	0.19	-1.0
1,081,339	-		MPMX19_03645	0.19	-0.0
1,081,339	-		MPMX19_03645	0.19	-1.8
1,081,339	-		MPMX19_03645	0.19	+1.2
1,081,339	-		MPMX19_03645	0.19	-0.9
1,081,339	-		MPMX19_03645	0.19	+0.7
1,081,339	-		MPMX19_03645	0.19	-1.5
1,081,339	-		MPMX19_03645	0.19	-0.5
1,081,341	+		MPMX19_03645	0.19	-0.6
1,081,341	+		MPMX19_03645	0.19	-0.3
1,081,341	+		MPMX19_03645	0.19	-1.1
1,081,341	+		MPMX19_03645	0.19	-0.9
1,081,341	+		MPMX19_03645	0.19	-0.4
1,081,341	+		MPMX19_03645	0.19	+0.1
1,081,341	+		MPMX19_03645	0.19	+0.5
1,081,341	+		MPMX19_03645	0.19	+0.3
1,081,341	+		MPMX19_03645	0.19	-0.8
1,081,341	+		MPMX19_03645	0.19	-1.1
1,081,341	+		MPMX19_03645	0.19	-0.4
1,081,341	+		MPMX19_03645	0.19	-0.3
1,081,341	+		MPMX19_03645	0.19	-0.8
1,081,341	+		MPMX19_03645	0.19	-0.0
1,081,341	+		MPMX19_03645	0.19	-0.3
1,081,341	+		MPMX19_03645	0.19	+0.5
1,081,341	+		MPMX19_03645	0.19	-1.0
1,081,341	+		MPMX19_03645	0.19	+0.1
1,081,341	+		MPMX19_03645	0.19	+0.7
1,081,341	+		MPMX19_03645	0.19	-0.7
1,081,341	+		MPMX19_03645	0.19	-1.4
1,081,341	+		MPMX19_03645	0.19	+0.9
1,081,341	+		MPMX19_03645	0.19	+0.3
1,081,341	+		MPMX19_03645	0.19	-0.7
1,081,341	+		MPMX19_03645	0.19	+0.8
1,081,341	+		MPMX19_03645	0.19	-2.1
1,081,341	+		MPMX19_03645	0.19	-0.9
1,081,341	+		MPMX19_03645	0.19	+0.1
1,081,341	+		MPMX19_03645	0.19	+0.1
1,081,341	+		MPMX19_03645	0.19	+0.8
1,081,341	+		MPMX19_03645	0.19	+0.1
1,081,341	+		MPMX19_03645	0.19	-0.3
1,081,342	-		MPMX19_03645	0.20	+0.7
1,081,342	-		MPMX19_03645	0.20	-0.7
1,081,342	-		MPMX19_03645	0.20	+0.1
1,081,342	-		MPMX19_03645	0.20	-0.4
1,081,342	-		MPMX19_03645	0.20	-0.4
1,081,342	-		MPMX19_03645	0.20	-0.3
1,081,342	-		MPMX19_03645	0.20	+0.2
1,081,342	-		MPMX19_03645	0.20	-0.5
1,081,342	-		MPMX19_03645	0.20	+0.2
1,081,342	-		MPMX19_03645	0.20	-0.4
1,081,342	-		MPMX19_03645	0.20	-0.3
1,081,342	-		MPMX19_03645	0.20	+0.9
1,081,342	-		MPMX19_03645	0.20	+0.4
1,081,342	-		MPMX19_03645	0.20	+0.2
1,081,342	-		MPMX19_03645	0.20	-0.3
1,081,342	-		MPMX19_03645	0.20	+0.5
1,081,342	-		MPMX19_03645	0.20	-0.4
1,081,342	-		MPMX19_03645	0.20	+0.1
1,081,342	-		MPMX19_03645	0.20	+0.9
1,081,579	+		MPMX19_03645	0.35	+0.1
1,081,579	+		MPMX19_03645	0.35	-1.7
1,081,580	-		MPMX19_03645	0.36	+0.1
1,081,580	-		MPMX19_03645	0.36	-0.1
1,081,580	-		MPMX19_03645	0.36	-0.1
1,081,605	+		MPMX19_03645	0.37	+0.3
1,081,605	+		MPMX19_03645	0.37	-1.4
1,081,606	-		MPMX19_03645	0.37	+0.3
1,081,606	-		MPMX19_03645	0.37	-0.1
1,081,606	-		MPMX19_03645	0.37	-0.7
1,081,701	+		MPMX19_03645	0.44	+0.8
1,081,701	+		MPMX19_03645	0.44	-2.2
1,081,701	+		MPMX19_03645	0.44	+0.1
1,081,701	+		MPMX19_03645	0.44	+0.1
1,081,701	+		MPMX19_03645	0.44	+0.8
1,081,701	+		MPMX19_03645	0.44	-0.9
1,081,701	+		MPMX19_03645	0.44	-1.7
1,081,701	+		MPMX19_03645	0.44	-0.5
1,081,702	-		MPMX19_03645	0.44	-0.5
1,081,702	-		MPMX19_03645	0.44	+0.1
1,081,702	-		MPMX19_03645	0.44	+0.1
1,081,702	-		MPMX19_03645	0.44	+0.1
1,081,702	-		MPMX19_03645	0.44	-0.7
1,081,702	-		MPMX19_03645	0.44	+0.7
1,081,702	-		MPMX19_03645	0.44	-0.7
1,081,740	+		MPMX19_03645	0.46	-0.3
1,081,740	+		MPMX19_03645	0.46	+0.4
1,081,740	+		MPMX19_03645	0.46	+0.7
1,081,740	+		MPMX19_03645	0.46	-0.2
1,081,740	+		MPMX19_03645	0.46	+0.1
1,081,740	+		MPMX19_03645	0.46	-0.3
1,081,740	+		MPMX19_03645	0.46	-0.5
1,081,740	+		MPMX19_03645	0.46	-0.3
1,081,740	+		MPMX19_03645	0.46	+0.3
1,081,740	+		MPMX19_03645	0.46	-0.2
1,081,740	+		MPMX19_03645	0.46	-0.4
1,081,740	+		MPMX19_03645	0.46	-0.1
1,081,740	+		MPMX19_03645	0.46	-0.5
1,081,740	+		MPMX19_03645	0.46	+0.4
1,081,740	+		MPMX19_03645	0.46	-1.4
1,081,740	+		MPMX19_03645	0.46	+0.9
1,081,740	+		MPMX19_03645	0.46	+0.9
1,081,740	+		MPMX19_03645	0.46	-0.3
1,081,740	+		MPMX19_03645	0.46	-0.5
1,081,740	+		MPMX19_03645	0.46	+0.1
1,081,740	+		MPMX19_03645	0.46	-0.7
1,081,740	+		MPMX19_03645	0.46	+0.2
1,081,740	+		MPMX19_03645	0.46	+1.7
1,081,740	+		MPMX19_03645	0.46	+0.2
1,081,740	+		MPMX19_03645	0.46	-0.8
1,081,740	+		MPMX19_03645	0.46	+0.7
1,081,740	+		MPMX19_03645	0.46	-1.7
1,081,740	+		MPMX19_03645	0.46	+0.1
1,081,741	-		MPMX19_03645	0.46	-1.4
1,081,741	-		MPMX19_03645	0.46	-0.8
1,081,741	-		MPMX19_03645	0.46	-1.0
1,081,741	-		MPMX19_03645	0.46	-0.7
1,081,741	-		MPMX19_03645	0.46	-1.9
1,081,741	-		MPMX19_03645	0.46	+0.3
1,081,741	-		MPMX19_03645	0.46	-1.1
1,081,741	-		MPMX19_03645	0.46	-0.8
1,081,741	-		MPMX19_03645	0.46	-0.1
1,081,741	-		MPMX19_03645	0.46	-1.0
1,081,741	-		MPMX19_03645	0.46	+1.3
1,081,741	-		MPMX19_03645	0.46	-0.4
1,081,741	-		MPMX19_03645	0.46	-1.8
1,081,741	-		MPMX19_03645	0.46	-0.3