Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02029

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,122,276	+		MPMX19_02027	0.78	-0.8
2,122,276	+		MPMX19_02027	0.78	+0.4
2,122,276	+		MPMX19_02027	0.78	+0.1
2,122,277	-		MPMX19_02027	0.78	+0.3
2,122,277	-		MPMX19_02027	0.78	-0.5
2,122,277	-		MPMX19_02027	0.78	-0.5
2,122,277	-		MPMX19_02027	0.78	-0.9
2,122,339	+		MPMX19_02027	0.83	-0.8
2,122,339	+		MPMX19_02027	0.83	-1.6
2,122,339	+		MPMX19_02027	0.83	-0.1
2,122,339	+		MPMX19_02027	0.83	-0.5
2,122,339	+		MPMX19_02027	0.83	-0.6
2,122,339	+		MPMX19_02027	0.83	-1.2
2,122,339	+		MPMX19_02027	0.83	-0.6
2,122,339	+		MPMX19_02027	0.83	-1.1
2,122,340	-		MPMX19_02027	0.83	-1.2
2,122,340	-		MPMX19_02027	0.83	-1.4
2,122,340	-		MPMX19_02027	0.83	+0.8
2,122,340	-		MPMX19_02027	0.83	+0.8
2,122,340	-		MPMX19_02027	0.83	+0.3
2,122,340	-		MPMX19_02027	0.83	-0.6
2,122,340	-		MPMX19_02027	0.83	+0.1
2,122,516	+				-2.6
2,122,516	+				-1.1
2,122,517	-				-0.8
2,122,517	-				+0.3
2,122,517	-				-0.6
2,122,662	+		MPMX19_02028	0.27	-1.5
2,122,662	+		MPMX19_02028	0.27	-0.6
2,122,662	+		MPMX19_02028	0.27	-1.3
2,122,662	+		MPMX19_02028	0.27	-2.1
2,122,662	+		MPMX19_02028	0.27	-2.3
2,122,662	+		MPMX19_02028	0.27	-0.8
2,122,662	+		MPMX19_02028	0.27	-1.6
2,122,662	+		MPMX19_02028	0.27	-0.4
2,122,662	+		MPMX19_02028	0.27	-1.0
2,122,662	+		MPMX19_02028	0.27	-0.4
2,122,662	+		MPMX19_02028	0.27	-0.5
2,122,662	+		MPMX19_02028	0.27	+0.6
2,122,662	+		MPMX19_02028	0.27	-0.6
2,122,663	-		MPMX19_02028	0.27	-0.1
2,122,663	-		MPMX19_02028	0.27	-0.2
2,122,663	-		MPMX19_02028	0.27	-0.5
2,122,663	-		MPMX19_02028	0.27	-0.5
2,122,663	-		MPMX19_02028	0.27	-0.5
2,122,663	-		MPMX19_02028	0.27	-0.1
2,122,663	-		MPMX19_02028	0.27	-1.6
2,122,663	-		MPMX19_02028	0.27	+0.5
2,122,663	-		MPMX19_02028	0.27	-0.4
2,122,663	-		MPMX19_02028	0.27	+0.1
2,122,663	-		MPMX19_02028	0.27	+2.1
2,122,663	-		MPMX19_02028	0.27	-0.5
2,122,665	+		MPMX19_02028	0.28	-1.5
2,122,665	+		MPMX19_02028	0.28	-1.8
2,122,665	+		MPMX19_02028	0.28	-1.3
2,122,665	+		MPMX19_02028	0.28	-0.9
2,122,665	+		MPMX19_02028	0.28	-0.3
2,122,665	+		MPMX19_02028	0.28	-0.1
2,122,665	+		MPMX19_02028	0.28	-0.8
2,122,665	+		MPMX19_02028	0.28	+0.2
2,122,665	+		MPMX19_02028	0.28	-0.1
2,122,665	+		MPMX19_02028	0.28	-0.5
2,122,665	+		MPMX19_02028	0.28	+2.1
2,122,665	+		MPMX19_02028	0.28	-1.1
2,122,665	+		MPMX19_02028	0.28	-0.6
2,122,665	+		MPMX19_02028	0.28	-1.8
2,122,665	+		MPMX19_02028	0.28	-0.5
2,122,665	+		MPMX19_02028	0.28	+0.4
2,122,665	+		MPMX19_02028	0.28	-0.1
2,122,665	+		MPMX19_02028	0.28	+1.1
2,122,665	+		MPMX19_02028	0.28	+0.5
2,122,665	+		MPMX19_02028	0.28	-0.8
2,122,665	+		MPMX19_02028	0.28	-0.5
2,122,665	+		MPMX19_02028	0.28	+0.2
2,122,665	+		MPMX19_02028	0.28	+1.3
2,122,665	+		MPMX19_02028	0.28	-0.6
2,122,665	+		MPMX19_02028	0.28	+1.1
2,122,665	+		MPMX19_02028	0.28	-1.1
2,122,665	+		MPMX19_02028	0.28	-0.7
2,122,665	+		MPMX19_02028	0.28	+0.5
2,122,665	+		MPMX19_02028	0.28	-1.6
2,122,666	-		MPMX19_02028	0.28	-0.8
2,122,666	-		MPMX19_02028	0.28	-0.8
2,122,666	-		MPMX19_02028	0.28	+0.8
2,122,666	-		MPMX19_02028	0.28	-0.8
2,122,666	-		MPMX19_02028	0.28	-0.1
2,122,666	-		MPMX19_02028	0.28	-1.0
2,122,666	-		MPMX19_02028	0.28	-1.3
2,122,666	-		MPMX19_02028	0.28	-0.2
2,122,666	-		MPMX19_02028	0.28	-0.5
2,122,666	-		MPMX19_02028	0.28	-0.6
2,122,666	-		MPMX19_02028	0.28	-0.5
2,122,666	-		MPMX19_02028	0.28	-1.0
2,122,666	-		MPMX19_02028	0.28	-0.4
2,122,666	-		MPMX19_02028	0.28	-1.6
2,122,666	-		MPMX19_02028	0.28	-0.2
2,122,666	-		MPMX19_02028	0.28	-0.1
2,122,666	-		MPMX19_02028	0.28	-1.4
2,122,666	-		MPMX19_02028	0.28	-0.5
2,122,666	-		MPMX19_02028	0.28	-1.2
2,122,666	-		MPMX19_02028	0.28	-1.3
2,122,666	-		MPMX19_02028	0.28	-0.1
2,122,666	-		MPMX19_02028	0.28	-0.6
2,122,666	-		MPMX19_02028	0.28	-0.5
2,122,666	-		MPMX19_02028	0.28	-0.3
2,122,666	-		MPMX19_02028	0.28	+0.1
2,122,666	-		MPMX19_02028	0.28	-0.1
2,122,666	-		MPMX19_02028	0.28	-1.0
2,122,666	-		MPMX19_02028	0.28	-0.1
2,122,666	-		MPMX19_02028	0.28	-0.7
2,122,666	-		MPMX19_02028	0.28	-1.4
2,122,666	-		MPMX19_02028	0.28	-2.7
2,122,666	-		MPMX19_02028	0.28	+0.4
2,122,666	-		MPMX19_02028	0.28	+0.5
2,122,666	-		MPMX19_02028	0.28	+0.4
2,122,666	-		MPMX19_02028	0.28	+0.8
2,122,666	-		MPMX19_02028	0.28	-1.1
2,122,791	+		MPMX19_02028	0.70	-0.1
2,122,791	+		MPMX19_02028	0.70	-1.7
2,122,791	+		MPMX19_02028	0.70	+0.0
2,122,791	+		MPMX19_02028	0.70	-0.2
2,122,791	+		MPMX19_02028	0.70	-1.6
2,122,792	-		MPMX19_02028	0.70	-0.8
2,122,792	-		MPMX19_02028	0.70	-1.3
2,122,851	+				-1.2
2,122,851	+				-0.1
2,122,851	+				-0.2
2,122,851	+				+0.2
2,122,851	+				-0.9
2,122,851	+				-0.7
2,122,851	+				-0.4
2,122,851	+				-0.4
2,122,851	+				+1.9
2,122,852	-				-0.9
2,122,852	-				-0.9
2,122,852	-				-0.3
2,122,852	-				+0.1
2,122,852	-				-0.9
2,122,852	-				+0.7
2,122,852	-				-0.2
2,122,852	-				-0.6
2,123,115	+				+0.4
2,123,115	+				-1.1
2,123,115	+				-1.1
2,123,115	+				-0.1
2,123,116	-				-0.8
2,123,116	-				-1.2
2,123,116	-				-0.5
2,123,116	-				-1.8
2,123,116	-				-0.8
2,123,132	+				-1.2
2,123,132	+				-1.6
2,123,132	+				-0.5
2,123,132	+				-0.1
2,123,133	-				+1.9
2,123,133	-				+1.1
2,123,133	-				-0.4
2,123,133	-				-0.5
2,123,133	-				-1.1
2,123,133	-				-0.9
2,123,179	+				-1.6
2,123,179	+				-0.8
2,123,179	+				-0.3
2,123,179	+				-0.3
2,123,179	+				-0.6
2,123,179	+				+0.0
2,123,179	+				-0.3
2,123,179	+				-1.3
2,123,179	+				-1.6
2,123,179	+				-0.6
2,123,179	+				+0.7
2,123,179	+				-0.5
2,123,179	+				-0.3
2,123,180	-				+0.7
2,123,180	-				+0.1
2,123,180	-				-0.3
2,123,180	-				-0.2
2,123,180	-				+0.7
2,123,180	-				-0.9
2,123,180	-				-1.5
2,123,180	-				-0.1
2,123,180	-				-0.1
2,123,180	-				+0.3
2,123,180	-				+0.5
2,123,180	-				-0.2
2,123,180	-				-1.6
2,123,180	-				-0.3
2,123,180	-				+0.4
2,123,180	-				-0.2
2,123,335	+		MPMX19_02029	0.15	-0.6
2,123,335	+		MPMX19_02029	0.15	+0.2
2,123,335	+		MPMX19_02029	0.15	-1.2
2,123,335	+		MPMX19_02029	0.15	-1.6
2,123,335	+		MPMX19_02029	0.15	+0.7
2,123,335	+		MPMX19_02029	0.15	-0.7
2,123,336	-		MPMX19_02029	0.15	-1.9
2,123,336	-		MPMX19_02029	0.15	+0.3
2,123,545	-		MPMX19_02029	0.29	-1.6
2,123,857	+		MPMX19_02029	0.50	-0.6
2,123,857	+		MPMX19_02029	0.50	-0.3
2,123,857	+		MPMX19_02029	0.50	+0.4
2,123,857	+		MPMX19_02029	0.50	-0.9
2,123,857	+		MPMX19_02029	0.50	-0.5
2,123,857	+		MPMX19_02029	0.50	-1.1
2,123,857	+		MPMX19_02029	0.50	-1.6
2,123,857	+		MPMX19_02029	0.50	-1.6
2,123,858	-		MPMX19_02029	0.50	-0.7
2,123,858	-		MPMX19_02029	0.50	-0.6
2,123,858	-		MPMX19_02029	0.50	-0.7
2,123,858	-		MPMX19_02029	0.50	-0.5
2,123,858	-		MPMX19_02029	0.50	-1.3
2,123,858	-		MPMX19_02029	0.50	-0.1
2,123,858	-		MPMX19_02029	0.50	-0.5
2,123,858	-		MPMX19_02029	0.50	-0.6
2,123,861	-		MPMX19_02029	0.50	+0.3
2,123,991	+		MPMX19_02029	0.59	-2.5
2,123,991	+		MPMX19_02029	0.59	-0.6
2,123,991	+		MPMX19_02029	0.59	-0.9
2,123,992	-		MPMX19_02029	0.59	-0.1
2,124,157	+		MPMX19_02029	0.70	-1.9
2,124,157	+		MPMX19_02029	0.70	+0.5
2,124,157	+		MPMX19_02029	0.70	-0.6
2,124,157	+		MPMX19_02029	0.70	+0.1
2,124,158	-		MPMX19_02029	0.70	+0.9
2,124,158	-		MPMX19_02029	0.70	-1.6
2,124,158	-		MPMX19_02029	0.70	-1.5
2,124,158	-		MPMX19_02029	0.70	-1.0
2,124,175	+		MPMX19_02029	0.71	-0.8
2,124,175	+		MPMX19_02029	0.71	-0.4
2,124,175	+		MPMX19_02029	0.71	-0.8
2,124,175	+		MPMX19_02029	0.71	+1.5
2,124,175	+		MPMX19_02029	0.71	-0.1
2,124,175	+		MPMX19_02029	0.71	-0.8
2,124,175	+		MPMX19_02029	0.71	-1.4
2,124,175	+		MPMX19_02029	0.71	+0.4
2,124,175	+		MPMX19_02029	0.71	-1.8
2,124,175	+		MPMX19_02029	0.71	-1.1
2,124,175	+		MPMX19_02029	0.71	-1.6
2,124,175	+		MPMX19_02029	0.71	-1.3
2,124,175	+		MPMX19_02029	0.71	+0.3
2,124,176	-		MPMX19_02029	0.71	+0.5
2,124,176	-		MPMX19_02029	0.71	-2.2
2,124,176	-		MPMX19_02029	0.71	-2.0
2,124,176	-		MPMX19_02029	0.71	-0.7
2,124,176	-		MPMX19_02029	0.71	+0.6
2,124,176	-		MPMX19_02029	0.71	-2.4
2,124,176	-		MPMX19_02029	0.71	-0.2
2,124,176	-		MPMX19_02029	0.71	+0.1
2,124,232	+		MPMX19_02029	0.75	-1.5
2,124,232	+		MPMX19_02029	0.75	-0.6
2,124,232	+		MPMX19_02029	0.75	+0.7
2,124,233	-		MPMX19_02029	0.75	-1.1
2,124,233	-		MPMX19_02029	0.75	-0.3
2,124,233	-		MPMX19_02029	0.75	+0.5
2,124,244	+		MPMX19_02029	0.76	+0.7
2,124,244	+		MPMX19_02029	0.76	-0.5
2,124,244	+		MPMX19_02029	0.76	-1.6
2,124,244	+		MPMX19_02029	0.76	-0.5
2,124,245	-		MPMX19_02029	0.76	-0.8
2,124,245	-		MPMX19_02029	0.76	-0.2
2,124,245	-		MPMX19_02029	0.76	-0.1
2,124,245	-		MPMX19_02029	0.76	-1.3
2,124,245	-		MPMX19_02029	0.76	-0.1
2,124,245	-		MPMX19_02029	0.76	-1.6
2,124,245	-		MPMX19_02029	0.76	+0.7
2,124,245	-		MPMX19_02029	0.76	+1.2
2,124,245	-		MPMX19_02029	0.76	-1.1
2,124,245	-		MPMX19_02029	0.76	-2.3
2,124,245	-		MPMX19_02029	0.76	-1.8
2,124,262	+		MPMX19_02029	0.77	-1.8
2,124,262	+		MPMX19_02029	0.77	-0.5
2,124,262	+		MPMX19_02029	0.77	-1.6
2,124,263	-		MPMX19_02029	0.77	-1.1
2,124,263	-		MPMX19_02029	0.77	-1.3
2,124,263	-		MPMX19_02029	0.77	+0.1
2,124,263	-		MPMX19_02029	0.77	-0.3
2,124,263	-		MPMX19_02029	0.77	-1.3
2,124,263	-		MPMX19_02029	0.77	-2.3
2,124,263	-		MPMX19_02029	0.77	-1.0
2,124,263	-		MPMX19_02029	0.77	-0.8
2,124,263	-		MPMX19_02029	0.77	+1.2
2,124,457	+		MPMX19_02029	0.90	-0.4
2,124,457	+		MPMX19_02029	0.90	-0.9
2,124,457	+		MPMX19_02029	0.90	+0.9
2,124,458	-				-0.1
2,124,458	-				+0.1
2,124,469	+				-1.1
2,124,469	+				+0.2
2,124,469	+				-1.6
2,124,469	+				+0.5
2,124,469	+				-0.1
2,124,469	+				+1.3
2,124,470	-				-0.2
2,124,470	-				-0.8
2,124,470	-				-0.5
2,124,470	-				+1.3
2,124,470	-				+1.3
2,124,470	-				-1.6
2,124,470	-				+0.4
2,124,470	-				+0.2
2,124,596	+				+0.1
2,124,597	-				-1.2
2,124,597	-				-1.9
2,124,734	+		MPMX19_02030	0.19	-0.6
2,124,734	+		MPMX19_02030	0.19	-0.3
2,124,734	+		MPMX19_02030	0.19	-0.5
2,124,734	+		MPMX19_02030	0.19	-0.1
2,124,734	+		MPMX19_02030	0.19	-0.1
2,124,734	+		MPMX19_02030	0.19	+0.5
2,124,735	-		MPMX19_02030	0.19	-0.3
2,124,735	-		MPMX19_02030	0.19	+0.2
2,124,735	-		MPMX19_02030	0.19	+0.9
2,124,839	+		MPMX19_02030	0.33	-1.3
2,124,839	+		MPMX19_02030	0.33	-0.3
2,124,839	+		MPMX19_02030	0.33	+0.4
2,124,839	+		MPMX19_02030	0.33	-0.6
2,124,839	+		MPMX19_02030	0.33	-0.1
2,124,839	+		MPMX19_02030	0.33	-1.0
2,124,839	+		MPMX19_02030	0.33	-0.2
2,124,839	+		MPMX19_02030	0.33	-1.2
2,124,839	+		MPMX19_02030	0.33	-1.3
2,124,839	+		MPMX19_02030	0.33	-2.0
2,124,839	+		MPMX19_02030	0.33	-0.2
2,124,839	+		MPMX19_02030	0.33	+0.4
2,124,839	+		MPMX19_02030	0.33	-2.2
2,124,840	-		MPMX19_02030	0.33	-0.5
2,124,840	-		MPMX19_02030	0.33	-0.1
2,124,840	-		MPMX19_02030	0.33	-1.5
2,124,840	-		MPMX19_02030	0.33	-1.1
2,124,840	-		MPMX19_02030	0.33	-0.4
2,124,840	-		MPMX19_02030	0.33	-0.3
2,124,840	-		MPMX19_02030	0.33	-1.1
2,124,840	-		MPMX19_02030	0.33	-1.1
2,124,840	-		MPMX19_02030	0.33	-0.5
2,124,840	-		MPMX19_02030	0.33	-0.5
2,124,840	-		MPMX19_02030	0.33	+0.9
2,124,840	-		MPMX19_02030	0.33	+0.7
2,124,840	-		MPMX19_02030	0.33	+0.2
2,124,840	-		MPMX19_02030	0.33	+0.4
2,124,840	-		MPMX19_02030	0.33	-2.4
2,124,840	-		MPMX19_02030	0.33	-0.2
2,124,840	-		MPMX19_02030	0.33	-0.3
2,124,860	+		MPMX19_02030	0.36	-0.6
2,124,860	+		MPMX19_02030	0.36	+0.2
2,124,860	+		MPMX19_02030	0.36	-0.1
2,124,860	+		MPMX19_02030	0.36	+0.2
2,124,860	+		MPMX19_02030	0.36	-0.6
2,124,860	+		MPMX19_02030	0.36	-1.5
2,124,861	-		MPMX19_02030	0.36	-1.3
2,124,861	-		MPMX19_02030	0.36	-0.3
2,124,861	-		MPMX19_02030	0.36	+0.2
2,124,861	-		MPMX19_02030	0.36	-1.3
2,125,199	+		MPMX19_02030	0.83	-1.7
2,125,200	-		MPMX19_02030	0.83	+0.2
2,125,319	+				+0.9
2,125,319	+				-2.9
2,125,319	+				-0.8
2,125,319	+				-1.7
2,125,319	+				-1.4
2,125,319	+				-0.4
2,125,319	+				-0.1
2,125,320	-				-0.5
2,125,320	-				-0.1
2,125,320	-				-0.8
2,125,320	-				-0.8
2,125,320	-				-0.7
2,125,320	-				+1.0
2,125,337	+				-0.5
2,125,337	+				-0.8
2,125,337	+				-0.3
2,125,338	-				-1.9
2,125,338	-				-1.0
2,125,338	-				-1.0
2,125,339	+				-1.5
2,125,339	+				-0.7
2,125,339	+				-1.0
2,125,339	+				-1.5
2,125,339	+				-0.4
2,125,340	-				-1.0
2,125,340	-				-0.8
2,125,345	+				-1.1
2,125,345	+				-1.0
2,125,345	+				+0.1
2,125,345	+				-1.6
2,125,346	-				-0.4
2,125,346	-				-0.7
2,125,346	-				+0.0
2,125,346	-				-0.1
2,125,346	-				-2.0
2,125,357	-				-0.9
2,125,440	+				+1.4
2,125,440	+				-1.5
2,125,440	+				-2.2
2,125,440	+				+0.2
2,125,458	+				+0.3