Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01721

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,811,802	-		MPMX19_01719	0.21	-0.4
1,812,051	-		MPMX19_01719	0.83	-2.6
1,812,051	-		MPMX19_01719	0.83	-0.0
1,812,051	-		MPMX19_01719	0.83	-0.3
1,812,051	-		MPMX19_01719	0.83	-1.9
1,812,169	+				-2.2
1,812,170	-				+1.1
1,812,170	-				+0.7
1,812,170	-				-0.9
1,812,170	-				-0.0
1,812,170	-				-0.5
1,812,170	-				-0.7
1,812,391	+		MPMX19_01720	0.29	-2.4
1,812,392	-		MPMX19_01720	0.29	+0.5
1,812,425	+		MPMX19_01720	0.35	-0.2
1,812,425	+		MPMX19_01720	0.35	-1.1
1,812,426	-		MPMX19_01720	0.35	-1.0
1,812,426	-		MPMX19_01720	0.35	-0.6
1,812,426	-		MPMX19_01720	0.35	-0.3
1,812,635	+		MPMX19_01720	0.72	-1.3
1,812,635	+		MPMX19_01720	0.72	-1.5
1,812,636	-		MPMX19_01720	0.73	-2.4
1,812,752	+				-0.5
1,812,752	+				-1.6
1,812,752	+				-0.3
1,812,770	-				-1.0
1,812,799	+				+0.2
1,812,799	+				-0.5
1,812,800	-				+0.1
1,812,800	-				-0.3
1,812,865	+				-0.1
1,812,865	+				-0.9
1,812,865	+				-0.6
1,812,865	+				+0.0
1,812,865	+				-0.6
1,812,865	+				-0.5
1,812,865	+				+1.1
1,812,865	+				-1.1
1,812,866	-				-0.6
1,812,866	-				-0.2
1,812,866	-				-0.9
1,812,866	-				-0.2
1,812,866	-				-1.0
1,812,866	-				-0.1
1,812,866	-				-1.0
1,812,913	+		MPMX19_01721	0.13	+0.5
1,812,913	+		MPMX19_01721	0.13	-2.2
1,812,913	+		MPMX19_01721	0.13	-0.5
1,812,913	+		MPMX19_01721	0.13	-0.5
1,812,913	+		MPMX19_01721	0.13	+0.1
1,812,913	+		MPMX19_01721	0.13	-0.0
1,812,913	+		MPMX19_01721	0.13	-1.5
1,812,913	+		MPMX19_01721	0.13	-0.5
1,812,913	+		MPMX19_01721	0.13	-0.8
1,812,914	-		MPMX19_01721	0.14	+1.1
1,812,914	-		MPMX19_01721	0.14	+0.5
1,812,914	-		MPMX19_01721	0.14	+1.0
1,812,914	-		MPMX19_01721	0.14	-1.6
1,812,914	-		MPMX19_01721	0.14	-0.2
1,812,914	-		MPMX19_01721	0.14	-0.1
1,812,914	-		MPMX19_01721	0.14	-1.3
1,812,919	+		MPMX19_01721	0.14	-1.1
1,812,919	+		MPMX19_01721	0.14	+1.5
1,812,919	+		MPMX19_01721	0.14	+0.5
1,812,919	+		MPMX19_01721	0.14	-1.3
1,812,919	+		MPMX19_01721	0.14	-0.8
1,812,919	+		MPMX19_01721	0.14	-0.8
1,812,919	+		MPMX19_01721	0.14	+0.7
1,812,919	+		MPMX19_01721	0.14	-0.7
1,812,919	+		MPMX19_01721	0.14	-2.9
1,812,919	+		MPMX19_01721	0.14	-0.6
1,812,919	+		MPMX19_01721	0.14	-2.7
1,812,919	+		MPMX19_01721	0.14	+0.2
1,812,920	-		MPMX19_01721	0.14	-1.2
1,812,920	-		MPMX19_01721	0.14	+0.2
1,812,920	-		MPMX19_01721	0.14	-1.3
1,812,920	-		MPMX19_01721	0.14	-1.3
1,812,920	-		MPMX19_01721	0.14	-0.5
1,812,920	-		MPMX19_01721	0.14	-1.2
1,812,920	-		MPMX19_01721	0.14	-1.8
1,812,920	-		MPMX19_01721	0.14	-1.7
1,812,920	-		MPMX19_01721	0.14	+0.3
1,812,920	-		MPMX19_01721	0.14	+0.4
1,812,920	-		MPMX19_01721	0.14	+0.2
1,812,920	-		MPMX19_01721	0.14	+0.5
1,812,920	-		MPMX19_01721	0.14	+0.2
1,812,920	-		MPMX19_01721	0.14	+0.3
1,812,920	-		MPMX19_01721	0.14	-0.3
1,812,920	-		MPMX19_01721	0.14	-0.9
1,812,961	+		MPMX19_01721	0.19	-1.6
1,813,003	+		MPMX19_01721	0.24	-0.6
1,813,003	+		MPMX19_01721	0.24	-0.5
1,813,003	+		MPMX19_01721	0.24	-1.3
1,813,003	+		MPMX19_01721	0.24	-1.0
1,813,003	+		MPMX19_01721	0.24	-1.2
1,813,003	+		MPMX19_01721	0.24	+1.2
1,813,003	+		MPMX19_01721	0.24	-1.0
1,813,003	+		MPMX19_01721	0.24	+0.1
1,813,003	+		MPMX19_01721	0.24	+0.2
1,813,003	+		MPMX19_01721	0.24	-1.3
1,813,003	+		MPMX19_01721	0.24	-1.0
1,813,003	+		MPMX19_01721	0.24	-0.6
1,813,004	-		MPMX19_01721	0.24	-1.2
1,813,004	-		MPMX19_01721	0.24	-1.5
1,813,004	-		MPMX19_01721	0.24	-0.5
1,813,004	-		MPMX19_01721	0.24	+0.1
1,813,004	-		MPMX19_01721	0.24	-0.3
1,813,004	-		MPMX19_01721	0.24	-1.4
1,813,004	-		MPMX19_01721	0.24	-1.2
1,813,063	+		MPMX19_01721	0.31	-1.2
1,813,063	+		MPMX19_01721	0.31	+0.7
1,813,063	+		MPMX19_01721	0.31	+0.5
1,813,063	+		MPMX19_01721	0.31	+1.2
1,813,063	+		MPMX19_01721	0.31	-1.3
1,813,063	+		MPMX19_01721	0.31	-1.3
1,813,064	-		MPMX19_01721	0.31	+0.7
1,813,064	-		MPMX19_01721	0.31	-0.9
1,813,165	+		MPMX19_01721	0.43	-1.7
1,813,165	+		MPMX19_01721	0.43	-1.0
1,813,165	+		MPMX19_01721	0.43	+0.5
1,813,165	+		MPMX19_01721	0.43	-0.2
1,813,166	-		MPMX19_01721	0.43	+1.1
1,813,166	-		MPMX19_01721	0.43	-1.4
1,813,171	+		MPMX19_01721	0.43	-0.8
1,813,171	+		MPMX19_01721	0.43	+0.7
1,813,171	+		MPMX19_01721	0.43	-0.1
1,813,171	+		MPMX19_01721	0.43	-0.9
1,813,171	+		MPMX19_01721	0.43	-0.5
1,813,171	+		MPMX19_01721	0.43	-0.5
1,813,171	+		MPMX19_01721	0.43	+0.2
1,813,171	+		MPMX19_01721	0.43	+0.3
1,813,172	-		MPMX19_01721	0.44	-0.3
1,813,183	+		MPMX19_01721	0.45	-1.4
1,813,183	+		MPMX19_01721	0.45	-0.5
1,813,183	+		MPMX19_01721	0.45	-1.0
1,813,183	+		MPMX19_01721	0.45	+0.7
1,813,183	+		MPMX19_01721	0.45	+0.5
1,813,183	+		MPMX19_01721	0.45	-0.3
1,813,183	+		MPMX19_01721	0.45	-1.0
1,813,183	+		MPMX19_01721	0.45	-0.8
1,813,183	+		MPMX19_01721	0.45	-0.5
1,813,183	+		MPMX19_01721	0.45	+0.1
1,813,183	+		MPMX19_01721	0.45	-1.2
1,813,183	+		MPMX19_01721	0.45	-0.6
1,813,183	+		MPMX19_01721	0.45	-0.8
1,813,183	+		MPMX19_01721	0.45	-1.1
1,813,183	+		MPMX19_01721	0.45	-0.2
1,813,183	+		MPMX19_01721	0.45	-1.3
1,813,184	-		MPMX19_01721	0.45	+0.7
1,813,184	-		MPMX19_01721	0.45	-2.2
1,813,184	-		MPMX19_01721	0.45	-2.3
1,813,184	-		MPMX19_01721	0.45	-1.1
1,813,184	-		MPMX19_01721	0.45	+1.1
1,813,184	-		MPMX19_01721	0.45	+0.0
1,813,184	-		MPMX19_01721	0.45	-0.9
1,813,184	-		MPMX19_01721	0.45	-1.3
1,813,184	-		MPMX19_01721	0.45	-1.5
1,813,184	-		MPMX19_01721	0.45	-0.9
1,813,184	-		MPMX19_01721	0.45	+0.6
1,813,184	-		MPMX19_01721	0.45	-0.2
1,813,184	-		MPMX19_01721	0.45	+1.2
1,813,184	-		MPMX19_01721	0.45	-0.8
1,813,184	-		MPMX19_01721	0.45	+1.1
1,813,184	-		MPMX19_01721	0.45	-0.0
1,813,184	-		MPMX19_01721	0.45	+1.5
1,813,184	-		MPMX19_01721	0.45	+1.5
1,813,184	-		MPMX19_01721	0.45	+0.1
1,813,184	-		MPMX19_01721	0.45	-1.2
1,813,217	+		MPMX19_01721	0.49	+0.3
1,813,218	-		MPMX19_01721	0.49	-0.9
1,813,218	-		MPMX19_01721	0.49	-0.0
1,813,218	-		MPMX19_01721	0.49	+0.5
1,813,218	-		MPMX19_01721	0.49	-0.1
1,813,218	-		MPMX19_01721	0.49	-0.1
1,813,218	-		MPMX19_01721	0.49	-1.0
1,813,218	-		MPMX19_01721	0.49	+0.0
1,813,351	+		MPMX19_01721	0.64	-0.2
1,813,351	+		MPMX19_01721	0.64	+0.3
1,813,351	+		MPMX19_01721	0.64	+0.5
1,813,351	+		MPMX19_01721	0.64	-1.6
1,813,351	+		MPMX19_01721	0.64	-0.9
1,813,351	+		MPMX19_01721	0.64	-0.8
1,813,351	+		MPMX19_01721	0.64	-0.5
1,813,351	+		MPMX19_01721	0.64	-1.3
1,813,351	+		MPMX19_01721	0.64	-2.0
1,813,352	-		MPMX19_01721	0.65	-0.8
1,813,352	-		MPMX19_01721	0.65	-1.2
1,813,352	-		MPMX19_01721	0.65	-0.2
1,813,352	-		MPMX19_01721	0.65	-2.4
1,813,352	-		MPMX19_01721	0.65	-0.8
1,813,352	-		MPMX19_01721	0.65	+0.0
1,813,352	-		MPMX19_01721	0.65	-0.0
1,813,424	+		MPMX19_01721	0.73	+0.0
1,813,424	+		MPMX19_01721	0.73	-0.5
1,813,424	+		MPMX19_01721	0.73	-2.6
1,813,424	+		MPMX19_01721	0.73	-0.8
1,813,424	+		MPMX19_01721	0.73	+1.0
1,813,425	-		MPMX19_01721	0.73	+0.6
1,813,425	-		MPMX19_01721	0.73	-0.7
1,813,426	+		MPMX19_01721	0.73	+0.2
1,813,426	+		MPMX19_01721	0.73	+0.5
1,813,426	+		MPMX19_01721	0.73	-0.6
1,813,427	-		MPMX19_01721	0.73	-0.8
1,813,427	-		MPMX19_01721	0.73	+1.4
1,813,427	-		MPMX19_01721	0.73	-0.6
1,813,427	-		MPMX19_01721	0.73	-0.4
1,813,427	-		MPMX19_01721	0.73	-0.3
1,813,427	-		MPMX19_01721	0.73	-0.2
1,813,427	-		MPMX19_01721	0.73	+1.7
1,813,516	+		MPMX19_01721	0.84	-1.0
1,813,516	+		MPMX19_01721	0.84	-1.0
1,813,516	+		MPMX19_01721	0.84	-0.5
1,813,516	+		MPMX19_01721	0.84	-0.8
1,813,517	-		MPMX19_01721	0.84	-1.2
1,813,517	-		MPMX19_01721	0.84	-0.5
1,813,517	-		MPMX19_01721	0.84	-0.2
1,813,517	-		MPMX19_01721	0.84	-0.5
1,813,517	-		MPMX19_01721	0.84	+0.3
1,813,621	+				-0.8
1,813,621	+				-0.5
1,813,621	+				-1.8
1,813,621	+				-0.1
1,813,621	+				-1.0
1,813,621	+				-1.1
1,813,621	+				-0.0
1,813,621	+				+0.6
1,813,622	-				+0.5
1,813,622	-				+0.3
1,813,622	-				-0.8
1,813,622	-				+1.0
1,813,622	-				+0.9
1,813,622	-				-0.5
1,813,622	-				+0.7
1,813,622	-				-0.3
1,813,622	-				-1.0
1,813,622	-				-2.3
1,813,622	-				+0.0
1,813,630	+				-0.2
1,813,630	+				-0.8
1,813,630	+				-0.6
1,813,630	+				-0.3
1,813,630	+				-1.0
1,813,630	+				-0.8
1,813,630	+				-0.2
1,813,631	-				-1.5
1,813,631	-				-1.2
1,813,631	-				-1.9
1,813,631	-				+1.3
1,813,631	-				-0.6
1,813,765	+				-0.8
1,813,765	+				+0.1
1,813,765	+				-0.3
1,813,765	+				+3.1
1,813,766	-				+1.0
1,813,766	-				+0.5
1,813,777	+				+0.0
1,813,777	+				+0.7
1,813,778	-				+0.3
1,813,778	-				-0.3
1,813,828	+				-1.8
1,813,828	+				-0.2
1,813,828	+				-1.2
1,813,828	+				-0.9
1,813,828	+				+0.1
1,813,829	-				-0.8
1,813,829	-				+1.0
1,813,829	-				-0.8
1,813,829	-				-0.0
1,813,829	-				+0.8
1,813,831	+				-1.3
1,814,502	-				-1.9
1,814,502	-				-0.7
1,814,517	-				-0.0