Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01584

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,655,978	+		MPMX19_01582	0.86	-1.5
1,655,978	+		MPMX19_01582	0.86	-2.1
1,655,978	+		MPMX19_01582	0.86	-0.8
1,655,978	+		MPMX19_01582	0.86	-1.1
1,655,979	-		MPMX19_01582	0.86	-0.6
1,656,034	+				+0.6
1,656,034	+				+0.2
1,656,045	+				+1.6
1,656,045	+				-0.6
1,656,046	-				-1.1
1,656,046	-				-3.6
1,656,148	+				-1.9
1,656,148	+				-0.2
1,656,148	+				-1.8
1,656,149	-				-2.6
1,656,356	+		MPMX19_01583	0.29	+1.2
1,656,848	+				-0.1
1,656,849	-				-0.2
1,656,849	-				+0.2
1,656,930	+				-0.7
1,656,930	+				-0.1
1,656,930	+				-0.0
1,656,930	+				+0.9
1,656,930	+				-0.2
1,656,930	+				-0.6
1,656,930	+				-0.0
1,656,930	+				-0.7
1,656,930	+				+0.4
1,656,930	+				-0.1
1,656,930	+				+0.5
1,656,930	+				-2.2
1,656,930	+				-0.1
1,656,930	+				-0.6
1,656,930	+				-2.9
1,656,930	+				-1.8
1,656,931	-				-0.2
1,656,931	-				+0.6
1,656,931	-				-1.8
1,656,931	-				-0.6
1,656,931	-				+0.1
1,656,931	-				-0.4
1,656,931	-				+0.4
1,656,931	-				+0.7
1,656,931	-				-0.4
1,656,931	-				+0.9
1,656,931	-				-0.9
1,656,931	-				-0.8
1,656,931	-				+1.2
1,656,931	-				-0.5
1,656,931	-				-0.2
1,656,931	-				-0.4
1,656,931	-				-0.8
1,656,931	-				+0.9
1,656,931	-				+0.1
1,656,931	-				-0.3
1,656,931	-				-0.7
1,656,931	-				-1.1
1,656,931	-				+0.4
1,656,931	-				-1.5
1,656,931	-				-0.3
1,656,932	+				-1.0
1,656,932	+				-1.7
1,656,933	-				-0.8
1,657,087	+				-0.7
1,657,087	+				-0.4
1,657,087	+				-0.0
1,657,087	+				-0.4
1,657,087	+				-1.1
1,657,087	+				-1.3
1,657,087	+				+0.5
1,657,087	+				+0.3
1,657,087	+				-0.6
1,657,087	+				-0.0
1,657,087	+				-1.1
1,657,087	+				-0.7
1,657,087	+				-0.2
1,657,087	+				-2.4
1,657,087	+				+0.5
1,657,087	+				+0.2
1,657,087	+				+0.6
1,657,087	+				+0.3
1,657,087	+				-0.8
1,657,087	+				-0.2
1,657,087	+				-1.6
1,657,087	+				+1.9
1,657,087	+				+0.6
1,657,087	+				-0.0
1,657,087	+				-0.3
1,657,087	+				+0.1
1,657,087	+				-1.2
1,657,087	-				+0.2
1,657,088	-				-0.5
1,657,088	-				+0.3
1,657,088	-				-0.7
1,657,088	-				-0.4
1,657,088	-				-0.0
1,657,088	-				-0.4
1,657,088	-				-0.4
1,657,088	-				+0.7
1,657,088	-				-0.7
1,657,088	-				-0.6
1,657,088	-				-0.0
1,657,088	-				+0.6
1,657,088	-				-1.1
1,657,088	-				-1.1
1,657,088	-				-0.4
1,657,088	-				-0.4
1,657,088	-				-2.6
1,657,088	-				-0.9
1,657,088	-				-1.2
1,657,088	-				+0.1
1,657,089	+				-0.0
1,657,089	+				-0.8
1,657,089	+				+0.3
1,657,089	+				-0.4
1,657,089	+				-0.4
1,657,090	-				-0.2
1,657,090	-				-0.4
1,657,660	+		MPMX19_01584	0.47	-0.2
1,657,660	+		MPMX19_01584	0.47	+0.2
1,657,660	+		MPMX19_01584	0.47	+0.6
1,657,660	+		MPMX19_01584	0.47	-0.8
1,657,661	-		MPMX19_01584	0.47	-1.2
1,657,661	-		MPMX19_01584	0.47	-1.3
1,657,661	-		MPMX19_01584	0.47	-1.1
1,657,661	-		MPMX19_01584	0.47	-0.0
1,657,661	-		MPMX19_01584	0.47	-1.2
1,657,661	-		MPMX19_01584	0.47	-0.2
1,657,661	-		MPMX19_01584	0.47	-0.6
1,657,661	-		MPMX19_01584	0.47	-0.6
1,657,714	+		MPMX19_01584	0.51	-0.5
1,657,714	+		MPMX19_01584	0.51	-0.2
1,657,714	+		MPMX19_01584	0.51	+0.6
1,657,714	+		MPMX19_01584	0.51	-0.3
1,657,714	+		MPMX19_01584	0.51	-1.4
1,657,715	-		MPMX19_01584	0.51	-0.8
1,657,715	-		MPMX19_01584	0.51	-0.0
1,657,715	-		MPMX19_01584	0.51	-1.5
1,657,715	-		MPMX19_01584	0.51	-0.0
1,657,964	-		MPMX19_01584	0.67	+1.2
1,657,964	-		MPMX19_01584	0.67	-2.0
1,658,236	+		MPMX19_01584	0.86	-0.2
1,658,236	+		MPMX19_01584	0.86	-1.2
1,658,236	+		MPMX19_01584	0.86	-1.8
1,658,236	+		MPMX19_01584	0.86	-1.8
1,658,236	+		MPMX19_01584	0.86	+0.2
1,658,237	-		MPMX19_01584	0.86	-0.0
1,658,237	-		MPMX19_01584	0.86	-0.3
1,658,237	-		MPMX19_01584	0.86	-1.0
1,658,237	-		MPMX19_01584	0.86	-1.3
1,658,237	-		MPMX19_01584	0.86	-1.2
1,658,237	-		MPMX19_01584	0.86	+0.1
1,658,237	-		MPMX19_01584	0.86	+0.2
1,658,237	-		MPMX19_01584	0.86	-0.7
1,658,237	-		MPMX19_01584	0.86	+0.1
1,658,237	-		MPMX19_01584	0.86	-0.1
1,658,237	-		MPMX19_01584	0.86	+0.6
1,658,237	-		MPMX19_01584	0.86	-0.6
1,658,237	-		MPMX19_01584	0.86	+0.2
1,658,237	-		MPMX19_01584	0.86	-0.1
1,658,237	-		MPMX19_01584	0.86	-0.9
1,658,248	+		MPMX19_01584	0.87	-1.2
1,658,248	+		MPMX19_01584	0.87	-0.7
1,658,248	+		MPMX19_01584	0.87	-0.2
1,658,248	+		MPMX19_01584	0.87	-1.0
1,658,248	+		MPMX19_01584	0.87	-1.1
1,658,248	+		MPMX19_01584	0.87	-0.8
1,658,249	-		MPMX19_01584	0.87	-0.6
1,658,249	-		MPMX19_01584	0.87	-0.3
1,658,249	-		MPMX19_01584	0.87	-1.0
1,658,249	-		MPMX19_01584	0.87	-0.3
1,658,249	-		MPMX19_01584	0.87	-0.8
1,658,249	-		MPMX19_01584	0.87	-2.0
1,658,350	+				-2.2
1,658,351	-				-2.2
1,658,404	+				-0.4
1,658,404	+				-0.2
1,658,404	+				-1.8
1,658,404	+				-1.5
1,658,404	+				-2.8
1,658,404	+				-1.1
1,658,404	+				-0.3
1,658,404	+				+0.1
1,658,404	+				-1.9
1,658,404	+				-1.7
1,658,404	+				-1.8
1,658,405	-				+0.2
1,658,405	-				-1.0
1,658,405	-				+0.5
1,658,405	-				-0.2
1,658,405	-				-0.2
1,658,405	-				+0.6
1,658,405	-				-1.3
1,658,405	-				+0.7
1,658,501	-				+0.2
1,658,706	+				+0.6
1,658,739	+				+0.6
1,658,739	+				-1.8
1,658,739	+				-1.0
1,658,739	+				+1.6
1,658,739	+				+1.1
1,658,739	+				-0.4
1,658,740	-				+1.2
1,658,740	-				-0.7
1,658,740	-				-0.4
1,658,740	-				-0.9
1,658,740	-				-0.8
1,658,740	-				-2.2
1,658,740	-				+0.6
1,658,740	-				-1.8
1,658,740	-				-0.1
1,658,866	+		MPMX19_01585	0.31	-1.2
1,658,867	-		MPMX19_01585	0.31	+0.2
1,658,867	-		MPMX19_01585	0.31	-0.8
1,658,926	+		MPMX19_01585	0.44	-1.9
1,658,926	+		MPMX19_01585	0.44	-1.6
1,658,926	+		MPMX19_01585	0.44	-0.3
1,658,989	+		MPMX19_01585	0.57	+0.2
1,658,989	+		MPMX19_01585	0.57	-0.7
1,658,989	+		MPMX19_01585	0.57	-0.2
1,658,989	+		MPMX19_01585	0.57	-1.0
1,658,990	-		MPMX19_01585	0.58	-1.2