Experiment: NL-CCM; low oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00652 and MPMX19_00653 overlap by 14 nucleotides MPMX19_00653 and MPMX19_00654 are separated by 102 nucleotides MPMX19_00654 and MPMX19_00655 are separated by 562 nucleotides
MPMX19_00652: MPMX19_00652 - Sulfite reductase [ferredoxin], at 670,906 to 672,597
_00652
MPMX19_00653: MPMX19_00653 - hypothetical protein, at 672,584 to 673,084
_00653
MPMX19_00654: MPMX19_00654 - hypothetical protein, at 673,187 to 673,834
_00654
MPMX19_00655: MPMX19_00655 - hypothetical protein, at 674,397 to 675,704
_00655
Position (kb) 673
674 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 672.196 kb on + strand, within MPMX19_00652 at 672.196 kb on + strand, within MPMX19_00652 at 672.196 kb on + strand, within MPMX19_00652 at 672.196 kb on + strand, within MPMX19_00652 at 672.196 kb on + strand, within MPMX19_00652 at 672.196 kb on + strand, within MPMX19_00652 at 672.196 kb on + strand, within MPMX19_00652 at 672.197 kb on - strand, within MPMX19_00652 at 672.197 kb on - strand, within MPMX19_00652 at 672.197 kb on - strand, within MPMX19_00652 at 672.197 kb on - strand, within MPMX19_00652 at 672.197 kb on - strand, within MPMX19_00652 at 672.197 kb on - strand, within MPMX19_00652 at 672.197 kb on - strand, within MPMX19_00652 at 672.197 kb on - strand, within MPMX19_00652 at 672.382 kb on + strand, within MPMX19_00652 at 672.382 kb on + strand, within MPMX19_00652 at 672.382 kb on + strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.383 kb on - strand, within MPMX19_00652 at 672.385 kb on + strand, within MPMX19_00652 at 672.385 kb on + strand, within MPMX19_00652 at 672.385 kb on + strand, within MPMX19_00652 at 672.386 kb on + strand, within MPMX19_00652 at 672.386 kb on - strand, within MPMX19_00652 at 672.499 kb on + strand at 672.499 kb on + strand at 672.499 kb on + strand at 672.499 kb on + strand at 672.499 kb on + strand at 672.499 kb on + strand at 672.499 kb on + strand at 672.499 kb on + strand at 672.499 kb on + strand at 672.500 kb on - strand at 672.500 kb on - strand at 672.500 kb on - strand at 672.500 kb on - strand at 672.500 kb on - strand at 672.583 kb on + strand at 672.583 kb on + strand at 672.583 kb on + strand at 672.583 kb on + strand at 672.584 kb on - strand at 672.584 kb on - strand at 672.584 kb on - strand at 672.584 kb on - strand at 672.869 kb on + strand, within MPMX19_00653 at 672.875 kb on + strand, within MPMX19_00653 at 672.875 kb on + strand, within MPMX19_00653 at 672.875 kb on + strand, within MPMX19_00653 at 672.875 kb on + strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.876 kb on - strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.920 kb on + strand, within MPMX19_00653 at 672.921 kb on - strand, within MPMX19_00653 at 672.921 kb on - strand, within MPMX19_00653 at 672.921 kb on - strand, within MPMX19_00653 at 672.921 kb on - strand, within MPMX19_00653 at 672.921 kb on - strand, within MPMX19_00653 at 672.921 kb on - strand, within MPMX19_00653 at 673.126 kb on + strand at 673.126 kb on + strand at 673.126 kb on + strand at 673.126 kb on + strand at 673.239 kb on + strand at 673.242 kb on + strand at 673.242 kb on + strand at 673.242 kb on + strand at 673.242 kb on + strand at 673.242 kb on + strand at 673.242 kb on + strand at 673.242 kb on + strand at 673.242 kb on + strand at 673.243 kb on - strand at 673.243 kb on - strand at 673.243 kb on - strand at 673.243 kb on - strand at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.341 kb on + strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.342 kb on - strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.345 kb on + strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.346 kb on - strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.557 kb on + strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.558 kb on - strand, within MPMX19_00654 at 673.575 kb on + strand, within MPMX19_00654 at 673.575 kb on + strand, within MPMX19_00654 at 673.575 kb on + strand, within MPMX19_00654 at 673.576 kb on - strand, within MPMX19_00654 at 673.576 kb on - strand, within MPMX19_00654 at 673.848 kb on + strand at 673.848 kb on + strand at 673.849 kb on - strand at 673.849 kb on - strand at 673.849 kb on - strand at 673.849 kb on - strand at 673.929 kb on + strand at 673.930 kb on - strand at 673.978 kb on + strand at 673.978 kb on + strand at 673.978 kb on + strand at 673.979 kb on - strand at 673.979 kb on - strand at 673.979 kb on - strand at 674.017 kb on + strand at 674.125 kb on + strand at 674.126 kb on - strand at 674.135 kb on + strand at 674.136 kb on - strand at 674.163 kb on + strand at 674.163 kb on + strand at 674.164 kb on - strand at 674.164 kb on - strand at 674.193 kb on + strand at 674.228 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.370 kb on + strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand at 674.371 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; low oxygen remove 672,196 + MPMX19_00652 0.76 +0.5 672,196 + MPMX19_00652 0.76 -1.4 672,196 + MPMX19_00652 0.76 -0.2 672,196 + MPMX19_00652 0.76 -1.2 672,196 + MPMX19_00652 0.76 +1.0 672,196 + MPMX19_00652 0.76 +1.0 672,196 + MPMX19_00652 0.76 -1.5 672,197 - MPMX19_00652 0.76 +1.8 672,197 - MPMX19_00652 0.76 +2.4 672,197 - MPMX19_00652 0.76 +1.2 672,197 - MPMX19_00652 0.76 +0.4 672,197 - MPMX19_00652 0.76 +0.6 672,197 - MPMX19_00652 0.76 -0.8 672,197 - MPMX19_00652 0.76 +0.3 672,197 - MPMX19_00652 0.76 +2.6 672,382 + MPMX19_00652 0.87 -1.6 672,382 + MPMX19_00652 0.87 -0.0 672,382 + MPMX19_00652 0.87 -2.4 672,383 - MPMX19_00652 0.87 -0.2 672,383 - MPMX19_00652 0.87 -0.8 672,383 - MPMX19_00652 0.87 -0.4 672,383 - MPMX19_00652 0.87 +0.8 672,383 - MPMX19_00652 0.87 -0.2 672,383 - MPMX19_00652 0.87 +1.4 672,383 - MPMX19_00652 0.87 +0.4 672,383 - MPMX19_00652 0.87 -0.2 672,383 - MPMX19_00652 0.87 -0.2 672,385 + MPMX19_00652 0.87 +0.7 672,385 + MPMX19_00652 0.87 +0.6 672,385 + MPMX19_00652 0.87 +0.8 672,386 + MPMX19_00652 0.87 -0.9 672,386 - MPMX19_00652 0.87 +1.1 672,499 + +0.2 672,499 + +0.6 672,499 + -0.9 672,499 + -1.7 672,499 + +0.3 672,499 + -1.9 672,499 + -0.8 672,499 + -0.1 672,499 + -0.8 672,500 - -1.3 672,500 - +2.0 672,500 - +1.0 672,500 - -1.4 672,500 - -2.1 672,583 + -1.2 672,583 + -1.0 672,583 + +0.5 672,583 + -1.0 672,584 - +0.4 672,584 - +0.6 672,584 - +0.4 672,584 - -0.9 672,869 + MPMX19_00653 0.57 +0.4 672,875 + MPMX19_00653 0.58 +0.1 672,875 + MPMX19_00653 0.58 -0.3 672,875 + MPMX19_00653 0.58 -0.0 672,875 + MPMX19_00653 0.58 -0.9 672,876 - MPMX19_00653 0.58 -0.0 672,876 - MPMX19_00653 0.58 +0.3 672,876 - MPMX19_00653 0.58 -1.0 672,876 - MPMX19_00653 0.58 +1.6 672,876 - MPMX19_00653 0.58 +0.8 672,876 - MPMX19_00653 0.58 -0.8 672,876 - MPMX19_00653 0.58 -0.6 672,876 - MPMX19_00653 0.58 -0.5 672,876 - MPMX19_00653 0.58 +1.0 672,920 + MPMX19_00653 0.67 +0.1 672,920 + MPMX19_00653 0.67 -0.0 672,920 + MPMX19_00653 0.67 -1.5 672,920 + MPMX19_00653 0.67 -0.8 672,920 + MPMX19_00653 0.67 -0.3 672,920 + MPMX19_00653 0.67 -0.6 672,920 + MPMX19_00653 0.67 -0.8 672,920 + MPMX19_00653 0.67 -0.2 672,920 + MPMX19_00653 0.67 +1.6 672,920 + MPMX19_00653 0.67 -1.8 672,920 + MPMX19_00653 0.67 -0.7 672,920 + MPMX19_00653 0.67 +1.0 672,920 + MPMX19_00653 0.67 +0.3 672,920 + MPMX19_00653 0.67 -0.0 672,921 - MPMX19_00653 0.67 +0.6 672,921 - MPMX19_00653 0.67 -0.2 672,921 - MPMX19_00653 0.67 -1.4 672,921 - MPMX19_00653 0.67 -0.8 672,921 - MPMX19_00653 0.67 -1.4 672,921 - MPMX19_00653 0.67 -0.2 673,126 + +0.3 673,126 + +0.2 673,126 + +0.1 673,126 + -0.4 673,239 + +0.4 673,242 + +2.6 673,242 + +0.1 673,242 + +0.2 673,242 + +0.8 673,242 + +0.9 673,242 + -0.4 673,242 + -0.3 673,242 + -0.0 673,243 - -0.0 673,243 - +0.6 673,243 - +0.5 673,243 - -1.9 673,341 + MPMX19_00654 0.24 +0.2 673,341 + MPMX19_00654 0.24 -0.2 673,341 + MPMX19_00654 0.24 -1.1 673,341 + MPMX19_00654 0.24 -0.5 673,341 + MPMX19_00654 0.24 +0.2 673,341 + MPMX19_00654 0.24 -0.2 673,341 + MPMX19_00654 0.24 -0.4 673,341 + MPMX19_00654 0.24 +1.1 673,341 + MPMX19_00654 0.24 -0.4 673,341 + MPMX19_00654 0.24 -0.4 673,341 + MPMX19_00654 0.24 +0.1 673,341 + MPMX19_00654 0.24 -0.8 673,341 + MPMX19_00654 0.24 +0.6 673,341 + MPMX19_00654 0.24 -1.2 673,341 + MPMX19_00654 0.24 +0.0 673,341 + MPMX19_00654 0.24 +0.1 673,341 + MPMX19_00654 0.24 +0.2 673,341 + MPMX19_00654 0.24 -0.2 673,341 + MPMX19_00654 0.24 +0.1 673,341 + MPMX19_00654 0.24 +0.5 673,341 + MPMX19_00654 0.24 +1.0 673,341 + MPMX19_00654 0.24 -1.8 673,341 + MPMX19_00654 0.24 +0.6 673,342 - 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Or see this region's nucleotide sequence