Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF527 and GFF528 are separated by 245 nucleotides GFF528 and GFF529 overlap by 60 nucleotides GFF529 and GFF530 are separated by 169 nucleotides
GFF527 - Flagellin FlaB1, at 585,368 to 586,168
GFF527
GFF528 - dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase, at 586,414 to 587,517
GFF528
GFF529 - hypothetical protein, at 587,458 to 587,583
GFF529
GFF530 - Flagellin FlaB1, at 587,753 to 588,553
GFF530
Position (kb) 586
587
588 Strain fitness (log2 ratio) -2
-1
0
1
2 at 585.421 kb on - strand at 585.421 kb on - strand at 585.421 kb on - strand at 585.453 kb on + strand, within GFF527 at 585.481 kb on + strand, within GFF527 at 585.641 kb on - strand, within GFF527 at 585.735 kb on + strand, within GFF527 at 585.777 kb on + strand, within GFF527 at 585.777 kb on + strand, within GFF527 at 585.794 kb on + strand, within GFF527 at 585.796 kb on + strand, within GFF527 at 585.796 kb on + strand, within GFF527 at 585.796 kb on + strand, within GFF527 at 585.937 kb on + strand, within GFF527 at 585.937 kb on + strand, within GFF527 at 585.937 kb on + strand, within GFF527 at 585.938 kb on - strand, within GFF527 at 585.938 kb on - strand, within GFF527 at 585.938 kb on - strand, within GFF527 at 585.962 kb on + strand, within GFF527 at 585.984 kb on + strand, within GFF527 at 586.159 kb on + strand at 586.160 kb on - strand at 586.160 kb on - strand at 586.166 kb on + strand at 586.191 kb on + strand at 586.191 kb on + strand at 586.191 kb on + strand at 586.191 kb on + strand at 586.192 kb on - strand at 586.192 kb on - strand at 586.192 kb on - strand at 586.192 kb on - strand at 586.192 kb on - strand at 586.193 kb on + strand at 586.193 kb on + strand at 586.193 kb on + strand at 586.193 kb on + strand at 586.193 kb on + strand at 586.194 kb on - strand at 586.194 kb on - strand at 586.194 kb on - strand at 586.194 kb on - strand at 586.194 kb on - strand at 586.194 kb on - strand at 586.194 kb on - strand at 586.220 kb on + strand at 586.278 kb on + strand at 586.278 kb on + strand at 586.342 kb on + strand at 586.343 kb on - strand at 586.344 kb on + strand at 586.345 kb on - strand at 586.345 kb on - strand at 586.345 kb on - strand at 586.366 kb on - strand at 586.398 kb on + strand at 586.398 kb on + strand at 586.398 kb on + strand at 586.444 kb on + strand at 586.445 kb on - strand at 586.504 kb on + strand at 586.505 kb on - strand at 586.509 kb on - strand at 586.552 kb on + strand, within GFF528 at 586.552 kb on + strand, within GFF528 at 586.552 kb on + strand, within GFF528 at 586.552 kb on + strand, within GFF528 at 586.553 kb on - strand, within GFF528 at 586.554 kb on + strand, within GFF528 at 586.554 kb on + strand, within GFF528 at 586.554 kb on + strand, within GFF528 at 586.554 kb on + strand, within GFF528 at 586.555 kb on - strand, within GFF528 at 586.555 kb on - strand, within GFF528 at 586.567 kb on + strand, within GFF528 at 586.568 kb on - strand, within GFF528 at 586.568 kb on - strand, within GFF528 at 586.620 kb on + strand, within GFF528 at 586.662 kb on + strand, within GFF528 at 586.662 kb on + strand, within GFF528 at 586.662 kb on + strand, within GFF528 at 586.662 kb on + strand, within GFF528 at 586.663 kb on - strand, within GFF528 at 586.663 kb on - strand, within GFF528 at 586.666 kb on + strand, within GFF528 at 586.666 kb on + strand, within GFF528 at 586.667 kb on - strand, within GFF528 at 586.667 kb on - strand, within GFF528 at 586.667 kb on - strand, within GFF528 at 586.667 kb on - strand, within GFF528 at 586.667 kb on - strand, within GFF528 at 586.668 kb on + strand, within GFF528 at 586.668 kb on + strand, within GFF528 at 586.668 kb on + strand, within GFF528 at 586.669 kb on - strand, within GFF528 at 586.669 kb on - strand, within GFF528 at 586.743 kb on + strand, within GFF528 at 586.808 kb on + strand, within GFF528 at 586.808 kb on + strand, within GFF528 at 586.808 kb on + strand, within GFF528 at 586.809 kb on - strand, within GFF528 at 586.809 kb on - strand, within GFF528 at 586.809 kb on - strand, within GFF528 at 586.810 kb on + strand, within GFF528 at 586.810 kb on + strand, within GFF528 at 586.811 kb on - strand, within GFF528 at 586.811 kb on - strand, within GFF528 at 586.811 kb on - strand, within GFF528 at 586.922 kb on + strand, within GFF528 at 586.926 kb on + strand, within GFF528 at 586.926 kb on + strand, within GFF528 at 586.926 kb on + strand, within GFF528 at 586.927 kb on - strand, within GFF528 at 586.927 kb on - strand, within GFF528 at 586.927 kb on - strand, within GFF528 at 586.927 kb on - strand, within GFF528 at 586.957 kb on + strand, within GFF528 at 587.031 kb on + strand, within GFF528 at 587.031 kb on + strand, within GFF528 at 587.032 kb on - strand, within GFF528 at 587.032 kb on - strand, within GFF528 at 587.032 kb on - strand, within GFF528 at 587.033 kb on + strand, within GFF528 at 587.033 kb on + strand, within GFF528 at 587.034 kb on - strand, within GFF528 at 587.051 kb on - strand, within GFF528 at 587.051 kb on - strand, within GFF528 at 587.051 kb on - strand, within GFF528 at 587.068 kb on + strand, within GFF528 at 587.069 kb on - strand, within GFF528 at 587.072 kb on - strand, within GFF528 at 587.072 kb on - strand, within GFF528 at 587.188 kb on + strand, within GFF528 at 587.188 kb on + strand, within GFF528 at 587.248 kb on - strand, within GFF528 at 587.248 kb on - strand, within GFF528 at 587.250 kb on + strand, within GFF528 at 587.250 kb on + strand, within GFF528 at 587.251 kb on - strand, within GFF528 at 587.251 kb on - strand, within GFF528 at 587.368 kb on + strand, within GFF528 at 587.368 kb on + strand, within GFF528 at 587.368 kb on + strand, within GFF528 at 587.416 kb on + strand at 587.429 kb on + strand at 587.492 kb on + strand at 587.493 kb on - strand at 587.557 kb on + strand, within GFF529 at 587.557 kb on + strand, within GFF529 at 587.647 kb on - strand at 587.647 kb on - strand at 587.662 kb on + strand at 587.662 kb on + strand at 587.699 kb on - strand at 587.699 kb on - strand at 587.719 kb on + strand at 587.719 kb on + strand at 587.720 kb on - strand at 587.720 kb on - strand at 587.723 kb on + strand at 587.723 kb on + strand at 587.723 kb on + strand at 587.723 kb on + strand at 587.723 kb on + strand at 587.723 kb on + strand at 587.724 kb on - strand at 587.724 kb on - strand at 587.724 kb on - strand at 587.724 kb on - strand at 587.724 kb on - strand at 587.729 kb on + strand at 587.729 kb on + strand at 587.729 kb on + strand at 587.729 kb on + strand at 587.729 kb on + strand at 587.729 kb on + strand at 587.730 kb on - strand at 587.730 kb on - strand at 587.747 kb on + strand at 587.748 kb on - strand at 587.767 kb on + strand at 587.768 kb on - strand at 587.768 kb on - strand at 587.770 kb on + strand at 587.771 kb on - strand at 588.058 kb on + strand, within GFF530 at 588.062 kb on + strand, within GFF530 at 588.062 kb on + strand, within GFF530 at 588.062 kb on + strand, within GFF530 at 588.079 kb on + strand, within GFF530 at 588.079 kb on + strand, within GFF530 at 588.080 kb on - strand, within GFF530 at 588.080 kb on - strand, within GFF530 at 588.082 kb on + strand, within GFF530 at 588.082 kb on + strand, within GFF530 at 588.083 kb on - strand, within GFF530 at 588.100 kb on + strand, within GFF530 at 588.101 kb on - strand, within GFF530 at 588.101 kb on - strand, within GFF530 at 588.134 kb on - strand, within GFF530 at 588.347 kb on + strand, within GFF530
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 585,421 - -0.9 585,421 - +0.4 585,421 - -0.1 585,453 + GFF527 0.11 +0.1 585,481 + GFF527 0.14 -2.0 585,641 - GFF527 0.34 -0.1 585,735 + GFF527 0.46 -1.5 585,777 + GFF527 0.51 -0.2 585,777 + GFF527 0.51 -0.5 585,794 + GFF527 0.53 +0.0 585,796 + GFF527 0.53 +0.1 585,796 + GFF527 0.53 -2.5 585,796 + GFF527 0.53 -0.1 585,937 + GFF527 0.71 -0.1 585,937 + GFF527 0.71 -0.7 585,937 + GFF527 0.71 -1.0 585,938 - GFF527 0.71 -0.7 585,938 - GFF527 0.71 +0.5 585,938 - GFF527 0.71 +1.2 585,962 + GFF527 0.74 +0.1 585,984 + GFF527 0.77 -0.5 586,159 + -0.5 586,160 - -0.7 586,160 - +0.1 586,166 + -0.4 586,191 + +1.1 586,191 + -0.1 586,191 + +0.1 586,191 + -0.1 586,192 - -0.9 586,192 - +0.0 586,192 - -1.1 586,192 - -1.1 586,192 - -0.9 586,193 + +1.9 586,193 + +0.1 586,193 + -1.1 586,193 + -1.1 586,193 + -1.5 586,194 - -1.1 586,194 - -0.6 586,194 - +0.1 586,194 - -1.2 586,194 - -0.8 586,194 - -1.1 586,194 - +0.6 586,220 + +0.3 586,278 + -0.6 586,278 + +0.2 586,342 + -0.1 586,343 - -1.1 586,344 + -0.3 586,345 - -1.2 586,345 - -0.9 586,345 - +0.7 586,366 - -1.1 586,398 + -2.0 586,398 + -0.4 586,398 + -1.5 586,444 + -0.1 586,445 - -1.1 586,504 + -1.2 586,505 - -0.5 586,509 - -0.1 586,552 + GFF528 0.12 -0.5 586,552 + GFF528 0.12 -1.1 586,552 + GFF528 0.12 -0.6 586,552 + GFF528 0.12 -0.0 586,553 - GFF528 0.13 -0.1 586,554 + GFF528 0.13 +0.1 586,554 + GFF528 0.13 +0.4 586,554 + GFF528 0.13 +0.2 586,554 + GFF528 0.13 +0.4 586,555 - GFF528 0.13 -2.0 586,555 - GFF528 0.13 -0.1 586,567 + GFF528 0.14 +1.5 586,568 - GFF528 0.14 +0.5 586,568 - GFF528 0.14 -2.1 586,620 + GFF528 0.19 -1.6 586,662 + GFF528 0.22 -1.7 586,662 + GFF528 0.22 +0.3 586,662 + GFF528 0.22 -0.1 586,662 + GFF528 0.22 -0.1 586,663 - GFF528 0.23 -1.7 586,663 - GFF528 0.23 -2.1 586,666 + GFF528 0.23 -0.2 586,666 + GFF528 0.23 -1.3 586,667 - GFF528 0.23 -1.9 586,667 - GFF528 0.23 -0.6 586,667 - GFF528 0.23 -1.5 586,667 - GFF528 0.23 +0.1 586,667 - GFF528 0.23 -0.0 586,668 + GFF528 0.23 -1.1 586,668 + GFF528 0.23 -1.5 586,668 + GFF528 0.23 -0.5 586,669 - GFF528 0.23 -0.5 586,669 - GFF528 0.23 -1.1 586,743 + GFF528 0.30 -2.1 586,808 + GFF528 0.36 -2.5 586,808 + GFF528 0.36 -0.7 586,808 + GFF528 0.36 -0.5 586,809 - GFF528 0.36 +0.5 586,809 - GFF528 0.36 -0.4 586,809 - GFF528 0.36 -0.5 586,810 + GFF528 0.36 +0.2 586,810 + GFF528 0.36 -0.9 586,811 - GFF528 0.36 -0.3 586,811 - GFF528 0.36 +0.2 586,811 - GFF528 0.36 -0.9 586,922 + GFF528 0.46 -0.1 586,926 + GFF528 0.46 -0.9 586,926 + GFF528 0.46 -0.9 586,926 + GFF528 0.46 -1.1 586,927 - GFF528 0.46 -0.5 586,927 - GFF528 0.46 -0.1 586,927 - GFF528 0.46 -0.5 586,927 - GFF528 0.46 -0.9 586,957 + GFF528 0.49 -1.7 587,031 + GFF528 0.56 -1.1 587,031 + GFF528 0.56 -0.3 587,032 - GFF528 0.56 +0.9 587,032 - GFF528 0.56 +0.5 587,032 - GFF528 0.56 -1.7 587,033 + GFF528 0.56 +0.5 587,033 + GFF528 0.56 -0.0 587,034 - GFF528 0.56 +0.0 587,051 - GFF528 0.58 -2.3 587,051 - GFF528 0.58 -0.0 587,051 - GFF528 0.58 +0.1 587,068 + GFF528 0.59 +0.5 587,069 - GFF528 0.59 -0.4 587,072 - GFF528 0.60 -1.1 587,072 - GFF528 0.60 -2.1 587,188 + GFF528 0.70 -0.6 587,188 + GFF528 0.70 -0.6 587,248 - GFF528 0.76 -1.1 587,248 - GFF528 0.76 -0.1 587,250 + GFF528 0.76 -0.6 587,250 + GFF528 0.76 -0.1 587,251 - GFF528 0.76 +0.5 587,251 - GFF528 0.76 +0.5 587,368 + GFF528 0.86 -0.6 587,368 + GFF528 0.86 -1.1 587,368 + GFF528 0.86 -1.4 587,416 + -0.5 587,429 + +0.7 587,492 + +0.5 587,493 - -0.9 587,557 + GFF529 0.79 -0.1 587,557 + GFF529 0.79 +0.1 587,647 - -1.1 587,647 - -0.2 587,662 + -1.1 587,662 + +0.1 587,699 - +0.5 587,699 - -0.1 587,719 + -1.7 587,719 + -1.9 587,720 - -1.1 587,720 - -0.4 587,723 + -0.8 587,723 + +0.3 587,723 + -2.0 587,723 + +0.9 587,723 + -0.1 587,723 + -1.0 587,724 - -0.6 587,724 - -1.5 587,724 - +0.9 587,724 - +1.1 587,724 - -0.6 587,729 + -1.5 587,729 + -0.3 587,729 + -0.5 587,729 + +0.9 587,729 + -1.1 587,729 + -0.1 587,730 - -1.1 587,730 - -1.7 587,747 + -0.8 587,748 - -0.5 587,767 + -0.5 587,768 - -1.1 587,768 - -0.3 587,770 + -0.9 587,771 - -0.7 588,058 + GFF530 0.38 -1.6 588,062 + GFF530 0.39 +0.4 588,062 + GFF530 0.39 -1.0 588,062 + GFF530 0.39 +0.2 588,079 + GFF530 0.41 -0.7 588,079 + GFF530 0.41 +0.5 588,080 - GFF530 0.41 -0.7 588,080 - GFF530 0.41 +1.8 588,082 + GFF530 0.41 -1.1 588,082 + GFF530 0.41 -1.5 588,083 - GFF530 0.41 +0.5 588,100 + GFF530 0.43 -0.1 588,101 - GFF530 0.43 -0.1 588,101 - GFF530 0.43 +0.9 588,134 - GFF530 0.48 -1.4 588,347 + GFF530 0.74 -0.8
Or see this region's nucleotide sequence