Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF250 and GFF251 overlap by 1 nucleotides GFF251 and GFF252 are separated by 9 nucleotides
GFF250 - ATP-dependent RNA helicase RhlE, at 263,825 to 265,309
GFF250
GFF251 - hypothetical protein, at 265,309 to 265,761
GFF251
GFF252 - hypothetical protein, at 265,771 to 266,694
GFF252
Position (kb) 265
266 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 264.340 kb on + strand, within GFF250 at 264.349 kb on + strand, within GFF250 at 264.361 kb on + strand, within GFF250 at 264.526 kb on + strand, within GFF250 at 264.526 kb on + strand, within GFF250 at 264.527 kb on - strand, within GFF250 at 264.527 kb on - strand, within GFF250 at 264.604 kb on + strand, within GFF250 at 264.820 kb on + strand, within GFF250 at 264.836 kb on + strand, within GFF250 at 264.836 kb on + strand, within GFF250 at 264.836 kb on + strand, within GFF250 at 264.837 kb on - strand, within GFF250 at 264.837 kb on - strand, within GFF250 at 264.837 kb on - strand, within GFF250 at 264.901 kb on + strand, within GFF250 at 265.275 kb on + strand at 265.275 kb on + strand at 265.280 kb on - strand at 265.297 kb on + strand at 265.356 kb on + strand, within GFF251 at 265.356 kb on + strand, within GFF251 at 265.357 kb on - strand, within GFF251 at 265.357 kb on - strand, within GFF251 at 265.357 kb on - strand, within GFF251 at 265.380 kb on + strand, within GFF251 at 265.395 kb on + strand, within GFF251 at 265.395 kb on + strand, within GFF251 at 265.395 kb on + strand, within GFF251 at 265.396 kb on - strand, within GFF251 at 265.420 kb on + strand, within GFF251 at 265.420 kb on + strand, within GFF251 at 265.421 kb on - strand, within GFF251 at 265.438 kb on + strand, within GFF251 at 265.524 kb on + strand, within GFF251 at 265.629 kb on + strand, within GFF251 at 265.641 kb on + strand, within GFF251 at 265.759 kb on + strand at 265.759 kb on + strand at 265.759 kb on + strand at 265.759 kb on + strand at 265.759 kb on + strand at 265.759 kb on + strand at 265.760 kb on - strand at 265.760 kb on - strand at 265.760 kb on - strand at 265.760 kb on - strand at 265.760 kb on - strand at 265.763 kb on + strand at 265.763 kb on + strand at 265.764 kb on - strand at 265.764 kb on - strand at 265.772 kb on + strand at 265.772 kb on + strand at 265.773 kb on - strand at 265.778 kb on + strand at 265.778 kb on + strand at 265.778 kb on + strand at 265.779 kb on - strand at 265.779 kb on - strand at 265.821 kb on + strand at 265.821 kb on + strand at 265.821 kb on + strand at 265.821 kb on + strand at 265.821 kb on + strand at 265.821 kb on + strand at 265.822 kb on - strand at 265.822 kb on - strand at 265.823 kb on + strand at 265.823 kb on + strand at 265.824 kb on - strand at 265.824 kb on - strand at 265.825 kb on + strand at 265.825 kb on + strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.826 kb on - strand at 265.866 kb on + strand, within GFF252 at 265.867 kb on - strand, within GFF252 at 265.891 kb on + strand, within GFF252 at 265.925 kb on + strand, within GFF252 at 265.926 kb on - strand, within GFF252 at 265.926 kb on - strand, within GFF252 at 265.943 kb on + strand, within GFF252 at 265.943 kb on + strand, within GFF252 at 265.943 kb on + strand, within GFF252 at 265.943 kb on + strand, within GFF252 at 265.944 kb on - strand, within GFF252 at 266.077 kb on - strand, within GFF252 at 266.179 kb on - strand, within GFF252 at 266.211 kb on - strand, within GFF252 at 266.211 kb on - strand, within GFF252 at 266.287 kb on - strand, within GFF252 at 266.326 kb on + strand, within GFF252 at 266.334 kb on + strand, within GFF252 at 266.334 kb on + strand, within GFF252 at 266.334 kb on + strand, within GFF252 at 266.334 kb on + strand, within GFF252 at 266.335 kb on - strand, within GFF252 at 266.335 kb on - strand, within GFF252 at 266.335 kb on - strand, within GFF252 at 266.399 kb on + strand, within GFF252 at 266.399 kb on + strand, within GFF252 at 266.400 kb on - strand, within GFF252 at 266.400 kb on - strand, within GFF252 at 266.400 kb on - strand, within GFF252 at 266.401 kb on + strand, within GFF252 at 266.401 kb on + strand, within GFF252 at 266.401 kb on + strand, within GFF252 at 266.402 kb on - strand, within GFF252 at 266.458 kb on - strand, within GFF252 at 266.518 kb on + strand, within GFF252 at 266.518 kb on + strand, within GFF252 at 266.583 kb on + strand, within GFF252 at 266.583 kb on + strand, within GFF252 at 266.583 kb on + strand, within GFF252 at 266.583 kb on + strand, within GFF252 at 266.584 kb on - strand, within GFF252 at 266.584 kb on - strand, within GFF252 at 266.586 kb on + strand, within GFF252 at 266.606 kb on + strand at 266.607 kb on - strand at 266.607 kb on - strand at 266.611 kb on - strand at 266.611 kb on - strand at 266.611 kb on - strand at 266.632 kb on - strand at 266.670 kb on + strand at 266.670 kb on + strand at 266.671 kb on - strand at 266.704 kb on - strand at 266.704 kb on - strand at 266.714 kb on + strand at 266.715 kb on - strand at 266.718 kb on + strand at 266.719 kb on - strand at 266.724 kb on - strand at 266.724 kb on - strand at 266.743 kb on + strand at 266.743 kb on + strand at 266.743 kb on + strand at 266.743 kb on + strand at 266.744 kb on - strand at 266.744 kb on - strand at 266.745 kb on + strand at 266.754 kb on + strand at 266.754 kb on + strand at 266.755 kb on - strand at 266.755 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 264,340 + GFF250 0.35 -0.1 264,349 + GFF250 0.35 -0.1 264,361 + GFF250 0.36 -1.1 264,526 + GFF250 0.47 +1.4 264,526 + GFF250 0.47 -0.8 264,527 - GFF250 0.47 -1.1 264,527 - GFF250 0.47 -0.6 264,604 + GFF250 0.52 -0.6 264,820 + GFF250 0.67 -2.3 264,836 + GFF250 0.68 +0.2 264,836 + GFF250 0.68 +0.0 264,836 + GFF250 0.68 +0.1 264,837 - GFF250 0.68 -2.8 264,837 - GFF250 0.68 -2.2 264,837 - GFF250 0.68 +0.9 264,901 + GFF250 0.72 -0.6 265,275 + -0.9 265,275 + -0.2 265,280 - -2.4 265,297 + +0.5 265,356 + GFF251 0.10 +1.4 265,356 + GFF251 0.10 -0.8 265,357 - GFF251 0.11 +0.4 265,357 - GFF251 0.11 -0.6 265,357 - GFF251 0.11 -0.9 265,380 + GFF251 0.16 -0.9 265,395 + GFF251 0.19 -2.8 265,395 + GFF251 0.19 -0.1 265,395 + GFF251 0.19 -1.6 265,396 - GFF251 0.19 +0.1 265,420 + GFF251 0.25 -0.9 265,420 + GFF251 0.25 -0.5 265,421 - GFF251 0.25 -0.2 265,438 + GFF251 0.28 -1.3 265,524 + GFF251 0.47 +0.2 265,629 + GFF251 0.71 +0.6 265,641 + GFF251 0.73 -0.9 265,759 + -0.6 265,759 + +0.4 265,759 + -0.9 265,759 + -0.6 265,759 + -0.1 265,759 + +0.9 265,760 - +0.2 265,760 - -0.1 265,760 - -0.4 265,760 - -1.3 265,760 - -0.4 265,763 + -0.1 265,763 + -0.1 265,764 - -0.3 265,764 - -0.8 265,772 + -0.4 265,772 + +0.8 265,773 - +0.3 265,778 + -1.0 265,778 + +0.1 265,778 + -0.9 265,779 - +0.0 265,779 - -1.3 265,821 + -0.9 265,821 + -0.5 265,821 + -1.2 265,821 + +0.6 265,821 + -1.3 265,821 + -0.9 265,822 - -0.5 265,822 - +0.2 265,823 + -1.4 265,823 + -1.1 265,824 - +0.8 265,824 - +0.9 265,825 + +0.1 265,825 + -0.2 265,826 - -1.4 265,826 - -2.3 265,826 - +0.7 265,826 - -1.6 265,826 - -1.2 265,826 - -0.2 265,826 - -0.3 265,826 - +0.1 265,826 - -0.2 265,826 - -2.1 265,866 + GFF252 0.10 -1.1 265,867 - GFF252 0.10 -1.1 265,891 + GFF252 0.13 -0.3 265,925 + GFF252 0.17 +0.1 265,926 - GFF252 0.17 +0.4 265,926 - GFF252 0.17 +0.9 265,943 + GFF252 0.19 -0.2 265,943 + GFF252 0.19 -0.1 265,943 + GFF252 0.19 -0.0 265,943 + GFF252 0.19 +0.1 265,944 - GFF252 0.19 -0.6 266,077 - GFF252 0.33 +0.1 266,179 - GFF252 0.44 +0.9 266,211 - GFF252 0.48 +0.2 266,211 - GFF252 0.48 -0.9 266,287 - GFF252 0.56 -0.1 266,326 + GFF252 0.60 -0.4 266,334 + GFF252 0.61 -0.6 266,334 + GFF252 0.61 -1.6 266,334 + GFF252 0.61 +1.6 266,334 + GFF252 0.61 +1.2 266,335 - GFF252 0.61 -0.1 266,335 - GFF252 0.61 -1.4 266,335 - GFF252 0.61 -0.4 266,399 + GFF252 0.68 -0.5 266,399 + GFF252 0.68 -0.1 266,400 - GFF252 0.68 +0.5 266,400 - GFF252 0.68 -2.9 266,400 - GFF252 0.68 +0.7 266,401 + GFF252 0.68 -1.4 266,401 + GFF252 0.68 +0.2 266,401 + GFF252 0.68 +0.1 266,402 - GFF252 0.68 +1.7 266,458 - GFF252 0.74 +0.6 266,518 + GFF252 0.81 +0.6 266,518 + GFF252 0.81 -1.4 266,583 + GFF252 0.88 -1.4 266,583 + GFF252 0.88 -0.5 266,583 + GFF252 0.88 -0.1 266,583 + GFF252 0.88 -0.8 266,584 - GFF252 0.88 -0.6 266,584 - GFF252 0.88 -0.2 266,586 + GFF252 0.88 -0.2 266,606 + +0.1 266,607 - -2.0 266,607 - -0.9 266,611 - -1.1 266,611 - -0.1 266,611 - -1.6 266,632 - -0.1 266,670 + -0.1 266,670 + +0.4 266,671 - -0.2 266,704 - +0.1 266,704 - -0.2 266,714 + -1.2 266,715 - -1.1 266,718 + +0.2 266,719 - -1.4 266,724 - -0.5 266,724 - -0.4 266,743 + -0.5 266,743 + -1.2 266,743 + -0.6 266,743 + -1.5 266,744 - -0.1 266,744 - -1.2 266,745 + -0.9 266,754 + +0.5 266,754 + -1.0 266,755 - -1.7 266,755 - -0.2
Or see this region's nucleotide sequence