Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_04732 and GEMAOFIL_04733 are separated by 5 nucleotides GEMAOFIL_04733 and GEMAOFIL_04734 are separated by 251 nucleotides GEMAOFIL_04734 and GEMAOFIL_04735 are separated by 231 nucleotides
GEMAOFIL_04732: GEMAOFIL_04732 - Ribosome maturation factor RimM, at 5,214,644 to 5,215,180
_04732
GEMAOFIL_04733: GEMAOFIL_04733 - 30S ribosomal protein S16, at 5,215,186 to 5,215,437
_04733
GEMAOFIL_04734: GEMAOFIL_04734 - Signal recognition particle protein, at 5,215,689 to 5,217,065
_04734
GEMAOFIL_04735: GEMAOFIL_04735 - Inner membrane protein YpjD, at 5,217,297 to 5,218,109
_04735
Position (kb)
5215
5216
5217
5218 Strain fitness (log2 ratio)
-2
-1
0
1 at 5215.583 kb on - strand at 5215.596 kb on - strand at 5215.690 kb on + strand at 5215.691 kb on - strand at 5215.691 kb on - strand at 5215.752 kb on - strand at 5217.113 kb on + strand at 5217.113 kb on + strand at 5217.114 kb on - strand at 5217.296 kb on + strand at 5217.296 kb on + strand at 5217.297 kb on - strand at 5217.346 kb on + strand at 5217.346 kb on + strand at 5217.346 kb on + strand at 5217.346 kb on + strand at 5217.346 kb on + strand at 5217.346 kb on + strand at 5217.347 kb on - strand at 5217.348 kb on + strand at 5217.348 kb on + strand at 5217.712 kb on - strand, within GEMAOFIL_04735 at 5217.976 kb on + strand, within GEMAOFIL_04735 at 5217.976 kb on + strand, within GEMAOFIL_04735 at 5217.977 kb on - strand, within GEMAOFIL_04735 at 5217.977 kb on - strand, within GEMAOFIL_04735
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 5,215,583 - -0.2 5,215,596 - -1.8 5,215,690 + -0.2 5,215,691 - +0.7 5,215,691 - -1.3 5,215,752 - -0.3 5,217,113 + -0.9 5,217,113 + -0.6 5,217,114 - -0.2 5,217,296 + -1.1 5,217,296 + +0.5 5,217,297 - +0.5 5,217,346 + -0.2 5,217,346 + -0.3 5,217,346 + -0.3 5,217,346 + -0.6 5,217,346 + -0.3 5,217,346 + -2.6 5,217,347 - +0.4 5,217,348 + +1.4 5,217,348 + -0.1 5,217,712 - GEMAOFIL_04735 0.51 +0.6 5,217,976 + GEMAOFIL_04735 0.84 +0.3 5,217,976 + GEMAOFIL_04735 0.84 +1.7 5,217,977 - GEMAOFIL_04735 0.84 +0.4 5,217,977 - GEMAOFIL_04735 0.84 +0.3
Or see this region's nucleotide sequence