Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00921 and GEMAOFIL_00922 are separated by 54 nucleotides GEMAOFIL_00922 and GEMAOFIL_00923 are separated by 37 nucleotides GEMAOFIL_00923 and GEMAOFIL_00924 are separated by 1 nucleotides GEMAOFIL_00924 and GEMAOFIL_00925 are separated by 4 nucleotides
GEMAOFIL_00921: GEMAOFIL_00921 - Ribose-phosphate pyrophosphokinase, at 1,064,247 to 1,065,179
_00921
GEMAOFIL_00922: GEMAOFIL_00922 - tRNA-Gln, at 1,065,234 to 1,065,308
_00922
GEMAOFIL_00923: GEMAOFIL_00923 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 1,065,346 to 1,066,197
_00923
GEMAOFIL_00924: GEMAOFIL_00924 - Outer-membrane lipoprotein LolB, at 1,066,199 to 1,066,816
_00924
GEMAOFIL_00925: GEMAOFIL_00925 - Beta-barrel assembly-enhancing protease, at 1,066,821 to 1,068,488
_00925
Position (kb) 1065
1066
1067 Strain fitness (log2 ratio) -1
0
1 at 1065.226 kb on - strand at 1066.190 kb on - strand at 1066.816 kb on + strand at 1066.816 kb on + strand at 1066.816 kb on + strand at 1066.817 kb on - strand at 1066.817 kb on - strand at 1066.817 kb on - strand at 1066.817 kb on - strand at 1066.822 kb on + strand at 1066.823 kb on - strand at 1067.153 kb on - strand, within GEMAOFIL_00925
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,065,226 - -0.1 1,066,190 - -0.4 1,066,816 + -1.3 1,066,816 + -1.5 1,066,816 + -0.7 1,066,817 - +0.6 1,066,817 - +0.5 1,066,817 - +0.8 1,066,817 - -0.3 1,066,822 + +0.4 1,066,823 - -0.0 1,067,153 - GEMAOFIL_00925 0.20 -1.4
Or see this region's nucleotide sequence