Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02164

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,261,667	+				-0.7
2,261,667	+				-1.2
2,261,668	-				+0.6
2,261,668	-				-0.5
2,261,823	+		MPMX19_02162	0.23	-1.5
2,261,823	+		MPMX19_02162	0.23	-1.4
2,261,823	+		MPMX19_02162	0.23	-0.5
2,261,823	+		MPMX19_02162	0.23	+0.5
2,261,823	+		MPMX19_02162	0.23	-1.5
2,261,823	+		MPMX19_02162	0.23	-1.8
2,261,823	+		MPMX19_02162	0.23	+0.0
2,261,823	+		MPMX19_02162	0.23	+0.9
2,261,823	+		MPMX19_02162	0.23	-0.4
2,261,823	+		MPMX19_02162	0.23	+0.0
2,261,823	+		MPMX19_02162	0.23	+1.0
2,261,823	+		MPMX19_02162	0.23	-0.2
2,261,823	+		MPMX19_02162	0.23	-0.1
2,261,824	-		MPMX19_02162	0.23	-1.1
2,261,824	-		MPMX19_02162	0.23	-0.8
2,261,824	-		MPMX19_02162	0.23	-1.0
2,261,824	-		MPMX19_02162	0.23	-0.1
2,261,824	-		MPMX19_02162	0.23	-0.1
2,261,824	-		MPMX19_02162	0.23	+0.4
2,261,824	-		MPMX19_02162	0.23	-0.1
2,261,824	-		MPMX19_02162	0.23	+0.0
2,261,824	-		MPMX19_02162	0.23	+0.3
2,261,824	-		MPMX19_02162	0.23	-0.6
2,262,090	+		MPMX19_02162	0.54	+0.0
2,262,090	+		MPMX19_02162	0.54	+0.0
2,262,090	+		MPMX19_02162	0.54	-0.9
2,262,090	+		MPMX19_02162	0.54	+0.2
2,262,090	+		MPMX19_02162	0.54	-2.4
2,262,091	-		MPMX19_02162	0.54	-1.5
2,262,091	-		MPMX19_02162	0.54	-1.1
2,262,091	-		MPMX19_02162	0.54	+0.5
2,262,091	-		MPMX19_02162	0.54	+0.3
2,262,091	-		MPMX19_02162	0.54	-1.0
2,262,091	-		MPMX19_02162	0.54	-0.7
2,262,091	-		MPMX19_02162	0.54	-0.2
2,262,091	-		MPMX19_02162	0.54	-0.4
2,262,091	-		MPMX19_02162	0.54	-2.0
2,262,091	-		MPMX19_02162	0.54	+0.4
2,262,091	-		MPMX19_02162	0.54	+0.3
2,262,246	+		MPMX19_02162	0.72	-0.1
2,262,246	+		MPMX19_02162	0.72	-1.3
2,262,246	+		MPMX19_02162	0.72	-2.0
2,262,246	+		MPMX19_02162	0.72	+0.2
2,262,246	+		MPMX19_02162	0.72	+1.5
2,262,246	+		MPMX19_02162	0.72	-1.2
2,262,246	+		MPMX19_02162	0.72	+0.0
2,262,246	+		MPMX19_02162	0.72	-0.2
2,262,246	+		MPMX19_02162	0.72	+0.9
2,262,246	+		MPMX19_02162	0.72	-0.2
2,262,247	-		MPMX19_02162	0.72	-0.5
2,262,247	-		MPMX19_02162	0.72	-0.0
2,262,247	-		MPMX19_02162	0.72	-1.4
2,262,247	-		MPMX19_02162	0.72	-1.2
2,262,247	-		MPMX19_02162	0.72	-0.4
2,262,247	-		MPMX19_02162	0.72	-1.0
2,262,247	-		MPMX19_02162	0.72	+0.4
2,262,247	-		MPMX19_02162	0.72	+0.0
2,262,247	-		MPMX19_02162	0.72	+0.9
2,262,247	-		MPMX19_02162	0.72	-0.6
2,262,303	+		MPMX19_02162	0.79	-1.0
2,262,303	+		MPMX19_02162	0.79	-1.4
2,262,303	+		MPMX19_02162	0.79	-0.2
2,262,303	+		MPMX19_02162	0.79	+0.0
2,262,303	+		MPMX19_02162	0.79	-0.8
2,262,303	+		MPMX19_02162	0.79	-0.5
2,262,303	+		MPMX19_02162	0.79	+0.4
2,262,303	+		MPMX19_02162	0.79	-0.7
2,262,303	+		MPMX19_02162	0.79	-0.2
2,262,303	+		MPMX19_02162	0.79	-0.1
2,262,303	+		MPMX19_02162	0.79	-0.4
2,262,303	+		MPMX19_02162	0.79	-0.4
2,262,303	+		MPMX19_02162	0.79	-0.3
2,262,303	+		MPMX19_02162	0.79	+0.6
2,262,303	+		MPMX19_02162	0.79	-2.2
2,262,303	+		MPMX19_02162	0.79	-1.2
2,262,303	+		MPMX19_02162	0.79	-1.0
2,262,303	+		MPMX19_02162	0.79	-0.2
2,262,303	+		MPMX19_02162	0.79	-2.2
2,262,303	+		MPMX19_02162	0.79	-0.9
2,262,303	+		MPMX19_02162	0.79	-1.3
2,262,303	+		MPMX19_02162	0.79	-0.2
2,262,303	+		MPMX19_02162	0.79	-0.6
2,262,303	+		MPMX19_02162	0.79	-0.7
2,262,303	+		MPMX19_02162	0.79	-0.3
2,262,303	+		MPMX19_02162	0.79	+0.3
2,262,303	+		MPMX19_02162	0.79	-1.1
2,262,303	+		MPMX19_02162	0.79	-0.5
2,262,304	-		MPMX19_02162	0.79	-1.1
2,262,304	-		MPMX19_02162	0.79	-0.0
2,262,304	-		MPMX19_02162	0.79	-0.4
2,262,304	-		MPMX19_02162	0.79	-0.9
2,262,304	-		MPMX19_02162	0.79	-0.4
2,262,304	-		MPMX19_02162	0.79	-1.3
2,262,304	-		MPMX19_02162	0.79	+0.4
2,262,304	-		MPMX19_02162	0.79	-0.1
2,262,304	-		MPMX19_02162	0.79	-0.6
2,262,304	-		MPMX19_02162	0.79	+0.9
2,262,304	-		MPMX19_02162	0.79	-2.5
2,262,304	-		MPMX19_02162	0.79	-1.3
2,262,304	-		MPMX19_02162	0.79	+0.0
2,262,304	-		MPMX19_02162	0.79	-1.4
2,262,304	-		MPMX19_02162	0.79	+0.4
2,262,304	-		MPMX19_02162	0.79	-0.1
2,262,304	-		MPMX19_02162	0.79	-0.1
2,262,304	-		MPMX19_02162	0.79	-1.8
2,262,304	-		MPMX19_02162	0.79	+0.2
2,262,304	-		MPMX19_02162	0.79	-0.9
2,262,304	-		MPMX19_02162	0.79	+0.8
2,262,304	-		MPMX19_02162	0.79	-0.6
2,262,304	-		MPMX19_02162	0.79	+0.0
2,262,304	-		MPMX19_02162	0.79	-0.3
2,262,304	-		MPMX19_02162	0.79	+0.1
2,262,304	-		MPMX19_02162	0.79	-0.7
2,262,304	-		MPMX19_02162	0.79	-0.3
2,262,304	-		MPMX19_02162	0.79	-0.1
2,262,304	-		MPMX19_02162	0.79	-0.3
2,262,339	+		MPMX19_02162	0.83	-1.7
2,262,339	+		MPMX19_02162	0.83	-0.7
2,262,339	+		MPMX19_02162	0.83	+0.2
2,262,339	+		MPMX19_02162	0.83	-0.2
2,262,339	+		MPMX19_02162	0.83	-0.2
2,262,339	+		MPMX19_02162	0.83	-0.8
2,262,339	+		MPMX19_02162	0.83	+0.9
2,262,339	+		MPMX19_02162	0.83	-0.2
2,262,340	-		MPMX19_02162	0.83	+1.0
2,262,340	-		MPMX19_02162	0.83	-0.4
2,262,340	-		MPMX19_02162	0.83	+0.7
2,262,340	-		MPMX19_02162	0.83	-1.7
2,262,340	-		MPMX19_02162	0.83	+0.8
2,262,436	-				-0.7
2,262,837	+		MPMX19_02164	0.24	-1.3
2,262,837	+		MPMX19_02164	0.24	-1.4
2,262,838	-		MPMX19_02164	0.24	+0.0
2,263,158	+		MPMX19_02164	0.58	-0.4
2,263,158	+		MPMX19_02164	0.58	+0.0
2,263,158	+		MPMX19_02164	0.58	+0.0
2,263,158	+		MPMX19_02164	0.58	+2.1
2,263,158	+		MPMX19_02164	0.58	+1.0
2,263,158	+		MPMX19_02164	0.58	+0.0
2,263,159	-		MPMX19_02164	0.58	+0.0
2,263,159	-		MPMX19_02164	0.58	+1.0
2,263,159	-		MPMX19_02164	0.58	-2.1
2,263,159	-		MPMX19_02164	0.58	-1.2
2,263,159	-		MPMX19_02164	0.58	+0.0
2,263,530	+				-0.4
2,263,530	+				-0.1
2,263,530	+				-0.1
2,263,530	+				+0.2
2,263,530	+				+0.1
2,263,530	+				-2.3
2,263,530	+				-0.5
2,263,530	+				+0.6
2,263,530	+				-0.8
2,263,530	+				-0.7
2,263,530	+				-1.0
2,263,531	-				-0.4
2,263,531	-				-1.0
2,263,531	-				-2.3
2,263,531	-				-1.1
2,263,531	-				-0.1
2,263,531	-				-0.1
2,263,531	-				+0.3
2,263,531	-				+0.4
2,263,531	-				-1.0
2,263,531	-				-0.7
2,263,531	-				-0.6
2,263,531	-				-0.4
2,263,685	+				+0.1
2,264,293	+		MPMX19_02165	0.72	+0.0