Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02051

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,147,531	+		MPMX19_02050	0.55	-1.7
2,147,531	+		MPMX19_02050	0.55	-0.8
2,147,531	+		MPMX19_02050	0.55	+1.4
2,147,531	+		MPMX19_02050	0.55	+0.5
2,147,531	+		MPMX19_02050	0.55	-2.3
2,147,531	+		MPMX19_02050	0.55	-1.3
2,147,532	-		MPMX19_02050	0.55	-1.2
2,147,532	-		MPMX19_02050	0.55	+1.4
2,147,532	-		MPMX19_02050	0.55	-0.6
2,147,532	-		MPMX19_02050	0.55	-0.2
2,147,532	-		MPMX19_02050	0.55	-0.8
2,147,532	-		MPMX19_02050	0.55	-0.5
2,147,546	+		MPMX19_02050	0.55	-1.1
2,147,546	+		MPMX19_02050	0.55	+0.6
2,147,547	-		MPMX19_02050	0.56	-0.6
2,147,547	-		MPMX19_02050	0.56	-0.1
2,147,547	-		MPMX19_02050	0.56	-1.2
2,147,846	+		MPMX19_02050	0.74	-1.0
2,147,846	+		MPMX19_02050	0.74	+0.3
2,147,846	+		MPMX19_02050	0.74	+0.3
2,147,846	+		MPMX19_02050	0.74	-0.5
2,147,847	-		MPMX19_02050	0.74	-0.7
2,147,847	-		MPMX19_02050	0.74	-1.8
2,147,956	+		MPMX19_02050	0.80	-0.2
2,147,956	+		MPMX19_02050	0.80	-0.4
2,147,956	+		MPMX19_02050	0.80	-2.4
2,147,956	+		MPMX19_02050	0.80	-0.5
2,147,956	+		MPMX19_02050	0.80	+0.2
2,147,956	+		MPMX19_02050	0.80	-0.6
2,147,956	+		MPMX19_02050	0.80	-0.4
2,147,956	+		MPMX19_02050	0.80	+0.2
2,147,956	+		MPMX19_02050	0.80	+0.0
2,147,956	+		MPMX19_02050	0.80	-1.2
2,147,956	+		MPMX19_02050	0.80	-0.2
2,147,956	+		MPMX19_02050	0.80	-0.8
2,147,957	-		MPMX19_02050	0.80	-0.3
2,147,957	-		MPMX19_02050	0.80	+0.0
2,147,957	-		MPMX19_02050	0.80	-0.3
2,147,957	-		MPMX19_02050	0.80	-0.4
2,147,957	-		MPMX19_02050	0.80	+0.1
2,147,957	-		MPMX19_02050	0.80	+1.0
2,147,957	-		MPMX19_02050	0.80	-0.4
2,147,957	-		MPMX19_02050	0.80	-0.7
2,148,363	+				+0.4
2,148,363	+				-0.4
2,148,363	+				-2.3
2,148,363	+				-1.6
2,148,363	+				-1.5
2,148,364	-				-0.2
2,148,660	+		MPMX19_02051	0.39	-0.4
2,148,660	+		MPMX19_02051	0.39	+0.2
2,148,660	+		MPMX19_02051	0.39	-0.0
2,148,661	-		MPMX19_02051	0.39	-0.6
2,148,661	-		MPMX19_02051	0.39	-0.3
2,148,661	-		MPMX19_02051	0.39	-0.6
2,148,661	-		MPMX19_02051	0.39	-0.5
2,148,798	+		MPMX19_02051	0.57	-1.8
2,148,798	+		MPMX19_02051	0.57	-0.3
2,148,799	-		MPMX19_02051	0.57	+1.2
2,148,799	-		MPMX19_02051	0.57	+0.3
2,148,799	-		MPMX19_02051	0.57	-0.2
2,148,799	-		MPMX19_02051	0.57	-2.0
2,148,799	-		MPMX19_02051	0.57	-1.8
2,148,799	-		MPMX19_02051	0.57	+0.4
2,148,799	-		MPMX19_02051	0.57	-1.2
2,148,880	+		MPMX19_02051	0.67	+0.4
2,148,880	+		MPMX19_02051	0.67	-0.4
2,148,880	+		MPMX19_02051	0.67	-1.1
2,148,880	+		MPMX19_02051	0.67	-1.3
2,148,880	+		MPMX19_02051	0.67	+0.0
2,148,880	+		MPMX19_02051	0.67	-1.2
2,148,881	-		MPMX19_02051	0.67	+0.7
2,148,881	-		MPMX19_02051	0.67	-0.6
2,148,881	-		MPMX19_02051	0.67	+0.6
2,148,881	-		MPMX19_02051	0.67	-0.7
2,148,881	-		MPMX19_02051	0.67	-2.0
2,148,882	+		MPMX19_02051	0.67	-0.3
2,148,882	+		MPMX19_02051	0.67	-0.8
2,148,882	+		MPMX19_02051	0.67	-0.0
2,148,882	+		MPMX19_02051	0.67	-0.1
2,148,882	+		MPMX19_02051	0.67	+0.4
2,148,882	+		MPMX19_02051	0.67	-1.0
2,148,882	+		MPMX19_02051	0.67	+0.4
2,148,882	+		MPMX19_02051	0.67	-1.4
2,148,882	+		MPMX19_02051	0.67	-0.3
2,148,882	+		MPMX19_02051	0.67	+0.8
2,148,882	+		MPMX19_02051	0.67	-0.8
2,148,882	+		MPMX19_02051	0.67	+0.2
2,148,882	+		MPMX19_02051	0.67	+0.0
2,148,882	+		MPMX19_02051	0.67	+0.4
2,148,882	+		MPMX19_02051	0.67	+0.9
2,148,882	+		MPMX19_02051	0.67	-0.0
2,148,882	+		MPMX19_02051	0.67	-0.0
2,148,882	+		MPMX19_02051	0.67	+0.6
2,148,882	+		MPMX19_02051	0.67	+0.4
2,148,882	+		MPMX19_02051	0.67	-0.7
2,148,882	+		MPMX19_02051	0.67	+0.1
2,148,882	+		MPMX19_02051	0.67	+0.4
2,148,882	+		MPMX19_02051	0.67	-0.9
2,148,882	+		MPMX19_02051	0.67	-0.9
2,148,882	+		MPMX19_02051	0.67	+0.2
2,148,882	+		MPMX19_02051	0.67	-0.4
2,148,882	+		MPMX19_02051	0.67	+0.4
2,148,882	+		MPMX19_02051	0.67	+0.0
2,148,882	+		MPMX19_02051	0.67	+0.0
2,148,882	+		MPMX19_02051	0.67	-0.2
2,148,882	+		MPMX19_02051	0.67	-1.0
2,148,883	-		MPMX19_02051	0.68	-0.4
2,148,883	-		MPMX19_02051	0.68	+0.0
2,148,883	-		MPMX19_02051	0.68	-0.6
2,148,883	-		MPMX19_02051	0.68	-0.3
2,148,883	-		MPMX19_02051	0.68	-0.6
2,148,883	-		MPMX19_02051	0.68	-0.2
2,148,883	-		MPMX19_02051	0.68	-0.5
2,148,883	-		MPMX19_02051	0.68	-0.7
2,148,883	-		MPMX19_02051	0.68	-0.5
2,148,883	-		MPMX19_02051	0.68	-1.4
2,148,883	-		MPMX19_02051	0.68	+1.1
2,148,883	-		MPMX19_02051	0.68	+0.6
2,148,883	-		MPMX19_02051	0.68	-0.2
2,148,883	-		MPMX19_02051	0.68	+0.6
2,148,883	-		MPMX19_02051	0.68	-1.0
2,148,883	-		MPMX19_02051	0.68	+1.1
2,148,883	-		MPMX19_02051	0.68	+0.3
2,149,017	+		MPMX19_02051	0.85	-1.7
2,149,017	+		MPMX19_02051	0.85	-2.1
2,149,017	+		MPMX19_02051	0.85	+0.6
2,149,017	+		MPMX19_02051	0.85	+0.1
2,149,017	+		MPMX19_02051	0.85	-0.1
2,149,017	+		MPMX19_02051	0.85	+0.4
2,149,017	+		MPMX19_02051	0.85	-1.1
2,149,017	+		MPMX19_02051	0.85	-1.6
2,149,017	+		MPMX19_02051	0.85	-0.1
2,149,017	+		MPMX19_02051	0.85	-1.2
2,149,018	-		MPMX19_02051	0.85	-1.2
2,149,018	-		MPMX19_02051	0.85	+1.2
2,149,018	-		MPMX19_02051	0.85	-0.6
2,149,018	-		MPMX19_02051	0.85	-0.1
2,149,018	-		MPMX19_02051	0.85	-1.6
2,149,018	-		MPMX19_02051	0.85	+0.3
2,149,018	-		MPMX19_02051	0.85	+0.4
2,149,018	-		MPMX19_02051	0.85	-1.2
2,149,018	-		MPMX19_02051	0.85	+2.2
2,149,148	+				-0.8
2,149,148	+				-0.4
2,149,149	-				-0.8
2,149,149	-				+0.1
2,149,149	-				+0.0
2,149,149	-				+0.5
2,149,154	+				+0.6
2,149,154	+				-1.7
2,149,154	+				-0.4
2,149,154	+				-0.3
2,149,154	+				-0.3
2,149,154	+				-0.8
2,149,155	-				-0.5
2,149,155	-				-0.4
2,149,155	-				-0.2
2,149,155	-				-0.2
2,149,250	+		MPMX19_02052	0.20	-0.3
2,149,251	-		MPMX19_02052	0.21	-0.3
2,149,251	-		MPMX19_02052	0.21	-0.2
2,149,251	-		MPMX19_02052	0.21	+0.7
2,149,280	+		MPMX19_02052	0.25	-0.8
2,149,280	+		MPMX19_02052	0.25	-1.1
2,149,281	-		MPMX19_02052	0.26	+0.6
2,149,281	-		MPMX19_02052	0.26	+0.4
2,149,325	+		MPMX19_02052	0.33	-1.2
2,149,325	+		MPMX19_02052	0.33	-1.0
2,149,326	-		MPMX19_02052	0.33	-1.1
2,149,326	-		MPMX19_02052	0.33	-0.4
2,149,326	-		MPMX19_02052	0.33	-0.7
2,149,326	-		MPMX19_02052	0.33	-0.9
2,149,326	-		MPMX19_02052	0.33	+0.4
2,149,326	-		MPMX19_02052	0.33	-0.2
2,149,559	+		MPMX19_02052	0.72	-2.8
2,149,559	+		MPMX19_02052	0.72	-0.6
2,149,559	+		MPMX19_02052	0.72	-0.6
2,149,559	+		MPMX19_02052	0.72	+0.4
2,149,559	+		MPMX19_02052	0.72	-0.3
2,149,559	+		MPMX19_02052	0.72	-0.1
2,149,559	+		MPMX19_02052	0.72	-1.7
2,149,559	+		MPMX19_02052	0.72	-2.3
2,149,560	-		MPMX19_02052	0.73	-1.3
2,149,560	-		MPMX19_02052	0.73	-0.7
2,149,560	-		MPMX19_02052	0.73	+0.0
2,149,560	-		MPMX19_02052	0.73	-0.6
2,149,560	-		MPMX19_02052	0.73	-0.8
2,149,560	-		MPMX19_02052	0.73	-0.6
2,149,560	-		MPMX19_02052	0.73	-0.3
2,149,560	-		MPMX19_02052	0.73	-1.2
2,149,560	-		MPMX19_02052	0.73	+1.0
2,149,560	-		MPMX19_02052	0.73	-0.3
2,149,560	-		MPMX19_02052	0.73	-0.0
2,149,560	-		MPMX19_02052	0.73	-0.6
2,149,948	+		MPMX19_02053	0.12	-1.4
2,149,948	+		MPMX19_02053	0.12	+0.6
2,149,948	+		MPMX19_02053	0.12	-0.4
2,149,948	+		MPMX19_02053	0.12	+0.1
2,149,948	+		MPMX19_02053	0.12	-0.3
2,149,948	+		MPMX19_02053	0.12	-1.1
2,149,948	+		MPMX19_02053	0.12	+0.2
2,149,948	+		MPMX19_02053	0.12	+1.3
2,149,948	+		MPMX19_02053	0.12	+1.0
2,149,948	+		MPMX19_02053	0.12	+0.7
2,149,948	+		MPMX19_02053	0.12	-0.6
2,149,948	+		MPMX19_02053	0.12	-1.2
2,149,948	+		MPMX19_02053	0.12	-1.3
2,149,948	+		MPMX19_02053	0.12	-0.3
2,149,948	+		MPMX19_02053	0.12	-0.6
2,149,948	+		MPMX19_02053	0.12	-0.4
2,149,948	+		MPMX19_02053	0.12	+2.6
2,149,948	+		MPMX19_02053	0.12	-0.8
2,149,948	+		MPMX19_02053	0.12	-1.4
2,149,948	+		MPMX19_02053	0.12	-0.7
2,149,949	-		MPMX19_02053	0.12	+1.1
2,149,949	-		MPMX19_02053	0.12	+0.7
2,149,949	-		MPMX19_02053	0.12	-0.3
2,149,949	-		MPMX19_02053	0.12	-0.3
2,149,949	-		MPMX19_02053	0.12	-0.2
2,149,949	-		MPMX19_02053	0.12	+0.3
2,149,949	-		MPMX19_02053	0.12	-0.1
2,149,949	-		MPMX19_02053	0.12	-0.4
2,149,949	-		MPMX19_02053	0.12	-0.3
2,149,949	-		MPMX19_02053	0.12	+0.4
2,149,949	-		MPMX19_02053	0.12	-1.4
2,149,949	-		MPMX19_02053	0.12	+0.6
2,149,949	-		MPMX19_02053	0.12	+0.2
2,149,949	-		MPMX19_02053	0.12	-0.0
2,149,949	-		MPMX19_02053	0.12	-1.7
2,149,949	-		MPMX19_02053	0.12	+0.4
2,149,949	-		MPMX19_02053	0.12	-1.1
2,150,032	+		MPMX19_02053	0.25	+0.4
2,150,032	+		MPMX19_02053	0.25	-1.0
2,150,032	+		MPMX19_02053	0.25	+0.9
2,150,033	-		MPMX19_02053	0.25	-2.1
2,150,033	-		MPMX19_02053	0.25	-0.3
2,150,083	+		MPMX19_02053	0.33	-0.8
2,150,083	+		MPMX19_02053	0.33	-0.7
2,150,083	+		MPMX19_02053	0.33	-0.7
2,150,083	+		MPMX19_02053	0.33	-0.9
2,150,083	+		MPMX19_02053	0.33	-0.4
2,150,083	+		MPMX19_02053	0.33	-0.0
2,150,083	+		MPMX19_02053	0.33	+0.0
2,150,083	+		MPMX19_02053	0.33	-1.0
2,150,083	+		MPMX19_02053	0.33	-0.6
2,150,083	+		MPMX19_02053	0.33	+0.2
2,150,083	+		MPMX19_02053	0.33	-0.3
2,150,083	+		MPMX19_02053	0.33	-0.3
2,150,084	-		MPMX19_02053	0.33	-0.5
2,150,084	-		MPMX19_02053	0.33	+1.0
2,150,084	-		MPMX19_02053	0.33	-1.0
2,150,084	-		MPMX19_02053	0.33	-1.2
2,150,084	-		MPMX19_02053	0.33	+1.4
2,150,084	-		MPMX19_02053	0.33	-1.1
2,150,084	-		MPMX19_02053	0.33	-0.6
2,150,084	-		MPMX19_02053	0.33	+0.4