Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01958

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,039,375	+		MPMX19_01957	0.41	-0.1
2,039,375	+		MPMX19_01957	0.41	-1.0
2,039,376	-		MPMX19_01957	0.41	-0.5
2,039,376	-		MPMX19_01957	0.41	-0.5
2,039,376	-		MPMX19_01957	0.41	-2.3
2,039,376	-		MPMX19_01957	0.41	-0.7
2,039,567	+		MPMX19_01957	0.56	-0.9
2,039,567	+		MPMX19_01957	0.56	-1.3
2,039,567	+		MPMX19_01957	0.56	+0.0
2,039,567	+		MPMX19_01957	0.56	-0.6
2,039,567	+		MPMX19_01957	0.56	+0.2
2,039,567	+		MPMX19_01957	0.56	+1.3
2,039,567	+		MPMX19_01957	0.56	-0.2
2,039,567	+		MPMX19_01957	0.56	-0.9
2,039,567	+		MPMX19_01957	0.56	-0.9
2,039,567	+		MPMX19_01957	0.56	+0.3
2,039,568	-		MPMX19_01957	0.56	-0.1
2,039,568	-		MPMX19_01957	0.56	+0.1
2,039,568	-		MPMX19_01957	0.56	-0.8
2,039,568	-		MPMX19_01957	0.56	-0.4
2,039,568	-		MPMX19_01957	0.56	+0.1
2,039,568	-		MPMX19_01957	0.56	-0.1
2,039,568	-		MPMX19_01957	0.56	-0.6
2,039,568	-		MPMX19_01957	0.56	-0.3
2,039,568	-		MPMX19_01957	0.56	-0.0
2,039,568	-		MPMX19_01957	0.56	+0.6
2,039,741	+		MPMX19_01957	0.70	+0.6
2,039,741	+		MPMX19_01957	0.70	+0.4
2,039,741	+		MPMX19_01957	0.70	+0.5
2,039,741	+		MPMX19_01957	0.70	-1.0
2,039,741	+		MPMX19_01957	0.70	+0.1
2,039,741	+		MPMX19_01957	0.70	+0.0
2,039,741	+		MPMX19_01957	0.70	+0.2
2,039,741	+		MPMX19_01957	0.70	+0.3
2,039,741	+		MPMX19_01957	0.70	+0.6
2,039,741	+		MPMX19_01957	0.70	-0.9
2,039,741	+		MPMX19_01957	0.70	-0.1
2,039,741	+		MPMX19_01957	0.70	-1.4
2,039,741	+		MPMX19_01957	0.70	+0.1
2,039,741	+		MPMX19_01957	0.70	+0.6
2,039,741	+		MPMX19_01957	0.70	+0.1
2,039,741	+		MPMX19_01957	0.70	-0.4
2,039,741	+		MPMX19_01957	0.70	+0.4
2,039,741	+		MPMX19_01957	0.70	-0.5
2,039,741	+		MPMX19_01957	0.70	-0.4
2,039,741	+		MPMX19_01957	0.70	-0.4
2,039,741	+		MPMX19_01957	0.70	+0.6
2,039,741	+		MPMX19_01957	0.70	+0.2
2,039,741	+		MPMX19_01957	0.70	-0.6
2,039,741	+		MPMX19_01957	0.70	-1.7
2,039,741	+		MPMX19_01957	0.70	+0.1
2,039,742	-		MPMX19_01957	0.70	-1.0
2,039,742	-		MPMX19_01957	0.70	+0.9
2,039,742	-		MPMX19_01957	0.70	-0.6
2,039,742	-		MPMX19_01957	0.70	-1.0
2,039,742	-		MPMX19_01957	0.70	+0.2
2,039,742	-		MPMX19_01957	0.70	-1.3
2,039,742	-		MPMX19_01957	0.70	+0.2
2,039,742	-		MPMX19_01957	0.70	-0.4
2,039,742	-		MPMX19_01957	0.70	-0.8
2,039,742	-		MPMX19_01957	0.70	+1.6
2,039,742	-		MPMX19_01957	0.70	-1.0
2,039,742	-		MPMX19_01957	0.70	+1.0
2,039,742	-		MPMX19_01957	0.70	+1.3
2,039,742	-		MPMX19_01957	0.70	-0.2
2,039,742	-		MPMX19_01957	0.70	+0.4
2,039,742	-		MPMX19_01957	0.70	-1.1
2,039,742	-		MPMX19_01957	0.70	-0.4
2,039,742	-		MPMX19_01957	0.70	+0.4
2,039,742	-		MPMX19_01957	0.70	+1.0
2,039,930	+		MPMX19_01957	0.85	-1.8
2,039,930	+		MPMX19_01957	0.85	-1.8
2,039,930	+		MPMX19_01957	0.85	-1.2
2,039,931	-		MPMX19_01957	0.85	+1.3
2,039,931	-		MPMX19_01957	0.85	+0.0
2,039,931	-		MPMX19_01957	0.85	+0.2
2,040,484	+		MPMX19_01958	0.30	+1.2
2,040,484	+		MPMX19_01958	0.30	-0.7
2,040,484	+		MPMX19_01958	0.30	+0.7
2,040,484	+		MPMX19_01958	0.30	-1.0
2,040,484	+		MPMX19_01958	0.30	-0.4
2,040,484	+		MPMX19_01958	0.30	+0.6
2,040,484	+		MPMX19_01958	0.30	-1.9
2,040,484	+		MPMX19_01958	0.30	-0.6
2,040,485	-		MPMX19_01958	0.30	+0.2
2,040,485	-		MPMX19_01958	0.30	+0.9
2,040,485	-		MPMX19_01958	0.30	+0.9
2,040,485	-		MPMX19_01958	0.30	+0.4
2,040,485	-		MPMX19_01958	0.30	+0.0
2,040,485	-		MPMX19_01958	0.30	+1.2
2,040,485	-		MPMX19_01958	0.30	+0.5
2,040,485	-		MPMX19_01958	0.30	-0.2
2,040,485	-		MPMX19_01958	0.30	-1.9
2,040,485	-		MPMX19_01958	0.30	-0.6
2,040,485	-		MPMX19_01958	0.30	-0.0
2,040,485	-		MPMX19_01958	0.30	+0.2
2,040,485	-		MPMX19_01958	0.30	-2.0
2,040,485	-		MPMX19_01958	0.30	-1.4
2,040,485	-		MPMX19_01958	0.30	+0.9
2,040,574	+		MPMX19_01958	0.38	+0.9
2,040,574	+		MPMX19_01958	0.38	+0.6
2,040,574	+		MPMX19_01958	0.38	+0.5
2,040,574	+		MPMX19_01958	0.38	+2.0
2,040,575	-		MPMX19_01958	0.38	-0.3
2,040,575	-		MPMX19_01958	0.38	+0.0
2,040,575	-		MPMX19_01958	0.38	+0.2
2,040,575	-		MPMX19_01958	0.38	-0.6
2,040,766	+		MPMX19_01958	0.53	+0.7
2,040,766	+		MPMX19_01958	0.53	+0.0
2,040,766	+		MPMX19_01958	0.53	-0.3
2,040,766	+		MPMX19_01958	0.53	+0.0
2,040,766	+		MPMX19_01958	0.53	-0.4
2,040,766	+		MPMX19_01958	0.53	+0.8
2,040,766	+		MPMX19_01958	0.53	+0.2
2,040,766	+		MPMX19_01958	0.53	-0.7
2,040,766	+		MPMX19_01958	0.53	-0.0
2,040,766	+		MPMX19_01958	0.53	+0.6
2,040,766	+		MPMX19_01958	0.53	-0.1
2,040,767	-		MPMX19_01958	0.54	+0.2
2,040,767	-		MPMX19_01958	0.54	-0.6
2,040,767	-		MPMX19_01958	0.54	+1.6
2,040,767	-		MPMX19_01958	0.54	+1.6
2,040,767	-		MPMX19_01958	0.54	-0.4
2,040,767	-		MPMX19_01958	0.54	-1.0
2,040,767	-		MPMX19_01958	0.54	-0.1
2,040,767	-		MPMX19_01958	0.54	+1.0
2,040,767	-		MPMX19_01958	0.54	-0.4
2,040,767	-		MPMX19_01958	0.54	-1.3
2,040,767	-		MPMX19_01958	0.54	+0.8
2,040,767	-		MPMX19_01958	0.54	-1.4
2,040,767	-		MPMX19_01958	0.54	-0.1
2,040,973	+		MPMX19_01958	0.70	-0.4
2,040,973	+		MPMX19_01958	0.70	-0.2
2,040,973	+		MPMX19_01958	0.70	+0.2
2,040,973	+		MPMX19_01958	0.70	-1.2
2,040,973	+		MPMX19_01958	0.70	-0.3
2,040,974	-		MPMX19_01958	0.71	+0.0
2,040,974	-		MPMX19_01958	0.71	-0.6
2,040,974	-		MPMX19_01958	0.71	-1.1
2,040,974	-		MPMX19_01958	0.71	-1.2
2,040,974	-		MPMX19_01958	0.71	-0.3
2,041,081	+		MPMX19_01958	0.79	-0.5
2,041,081	+		MPMX19_01958	0.79	+0.4
2,041,081	+		MPMX19_01958	0.79	+0.6
2,041,081	+		MPMX19_01958	0.79	-0.1
2,041,081	+		MPMX19_01958	0.79	-0.3
2,041,081	+		MPMX19_01958	0.79	+0.0
2,041,081	+		MPMX19_01958	0.79	-0.4
2,041,081	+		MPMX19_01958	0.79	-1.0
2,041,082	-		MPMX19_01958	0.79	+0.4
2,041,129	+		MPMX19_01958	0.83	+0.3
2,041,129	+		MPMX19_01958	0.83	-1.0
2,041,130	-		MPMX19_01958	0.83	+0.5
2,041,130	-		MPMX19_01958	0.83	-0.6
2,041,130	-		MPMX19_01958	0.83	+0.6
2,041,192	+		MPMX19_01958	0.88	+1.6
2,041,192	+		MPMX19_01958	0.88	-0.3
2,041,192	+		MPMX19_01958	0.88	+0.2
2,041,192	+		MPMX19_01958	0.88	-1.0
2,041,192	+		MPMX19_01958	0.88	-0.4
2,041,192	+		MPMX19_01958	0.88	+0.1
2,041,193	-		MPMX19_01958	0.89	-0.6
2,041,193	-		MPMX19_01958	0.89	-1.4
2,041,193	-		MPMX19_01958	0.89	+0.8
2,042,242	+				-0.1
2,042,242	+				-0.1
2,042,242	+				-0.4
2,042,242	+				-1.0
2,042,242	+				-0.1
2,042,243	-				+0.3
2,042,243	-				+0.6
2,042,243	-				+1.2
2,042,243	-				-0.5
2,042,243	-				-1.0
2,042,243	-				+0.4
2,042,260	+				-1.7
2,042,260	+				+0.6
2,042,260	+				-0.3
2,042,261	-				-0.4
2,042,261	-				-0.6