Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01936

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,016,298	+		MPMX19_01934	0.69	+0.4
2,016,298	+		MPMX19_01934	0.69	-0.4
2,016,298	+		MPMX19_01934	0.69	-0.4
2,016,299	-		MPMX19_01934	0.69	-0.2
2,016,299	-		MPMX19_01934	0.69	-0.6
2,016,299	-		MPMX19_01934	0.69	-1.3
2,016,598	-		MPMX19_01935	0.13	+1.0
2,016,684	+		MPMX19_01935	0.28	-1.6
2,016,684	+		MPMX19_01935	0.28	-1.0
2,016,684	+		MPMX19_01935	0.28	-1.6
2,016,685	-		MPMX19_01935	0.28	+0.2
2,016,756	+		MPMX19_01935	0.41	-0.5
2,016,756	+		MPMX19_01935	0.41	+0.1
2,016,756	+		MPMX19_01935	0.41	-0.6
2,016,757	-		MPMX19_01935	0.41	-0.4
2,016,757	-		MPMX19_01935	0.41	-0.0
2,016,757	-		MPMX19_01935	0.41	+0.3
2,017,032	+		MPMX19_01935	0.88	-0.5
2,017,032	+		MPMX19_01935	0.88	-0.5
2,017,032	+		MPMX19_01935	0.88	-1.2
2,017,032	+		MPMX19_01935	0.88	-2.6
2,017,032	+		MPMX19_01935	0.88	+0.4
2,017,032	+		MPMX19_01935	0.88	-0.7
2,017,033	-		MPMX19_01935	0.88	-0.6
2,017,135	-				-1.6
2,017,235	-				-0.8
2,017,235	-				-1.2
2,017,235	-				+0.3
2,017,244	+				-1.3
2,017,244	+				-0.8
2,017,459	-		MPMX19_01936	0.19	-1.6
2,017,615	+		MPMX19_01936	0.32	-0.9
2,017,615	+		MPMX19_01936	0.32	-0.4
2,017,615	+		MPMX19_01936	0.32	-1.3
2,017,615	+		MPMX19_01936	0.32	-1.0
2,017,615	+		MPMX19_01936	0.32	-0.4
2,017,615	+		MPMX19_01936	0.32	+0.1
2,017,615	+		MPMX19_01936	0.32	-0.6
2,017,615	+		MPMX19_01936	0.32	-1.1
2,017,615	+		MPMX19_01936	0.32	-1.2
2,017,615	+		MPMX19_01936	0.32	+0.3
2,017,615	+		MPMX19_01936	0.32	-2.2
2,017,615	+		MPMX19_01936	0.32	-0.4
2,017,616	-		MPMX19_01936	0.33	+0.5
2,017,616	-		MPMX19_01936	0.33	-0.7
2,017,616	-		MPMX19_01936	0.33	-1.1
2,017,616	-		MPMX19_01936	0.33	-0.1
2,017,616	-		MPMX19_01936	0.33	-0.8
2,017,616	-		MPMX19_01936	0.33	-0.1
2,017,616	-		MPMX19_01936	0.33	-0.5
2,017,616	-		MPMX19_01936	0.33	-1.6
2,017,616	-		MPMX19_01936	0.33	-1.3
2,017,616	-		MPMX19_01936	0.33	-1.6
2,017,616	-		MPMX19_01936	0.33	+0.3
2,017,616	-		MPMX19_01936	0.33	-1.3
2,017,616	-		MPMX19_01936	0.33	-0.4
2,017,616	-		MPMX19_01936	0.33	-1.7
2,017,616	-		MPMX19_01936	0.33	-0.7
2,017,616	-		MPMX19_01936	0.33	-1.7
2,017,616	-		MPMX19_01936	0.33	-0.4
2,017,616	-		MPMX19_01936	0.33	-2.0
2,017,616	-		MPMX19_01936	0.33	-0.4
2,017,616	-		MPMX19_01936	0.33	-1.1
2,017,616	-		MPMX19_01936	0.33	-1.3
2,017,616	-		MPMX19_01936	0.33	+0.1
2,017,616	-		MPMX19_01936	0.33	-1.4
2,017,616	-		MPMX19_01936	0.33	-2.1
2,017,616	-		MPMX19_01936	0.33	-0.6
2,017,616	-		MPMX19_01936	0.33	-1.3
2,017,620	+		MPMX19_01936	0.33	-1.6
2,017,620	+		MPMX19_01936	0.33	-0.6
2,017,620	+		MPMX19_01936	0.33	-0.5
2,017,620	+		MPMX19_01936	0.33	-1.8
2,017,620	+		MPMX19_01936	0.33	-2.2
2,017,658	+		MPMX19_01936	0.36	-0.8
2,017,658	+		MPMX19_01936	0.36	-1.3
2,017,658	+		MPMX19_01936	0.36	-0.9
2,017,659	-		MPMX19_01936	0.36	-1.1
2,017,659	-		MPMX19_01936	0.36	-1.6
2,017,714	+		MPMX19_01936	0.41	-0.8
2,017,714	+		MPMX19_01936	0.41	+0.4
2,017,714	+		MPMX19_01936	0.41	-1.2
2,017,801	+		MPMX19_01936	0.48	-0.8
2,017,801	+		MPMX19_01936	0.48	-1.3
2,017,801	+		MPMX19_01936	0.48	-1.3
2,017,802	-		MPMX19_01936	0.48	-0.8
2,017,802	-		MPMX19_01936	0.48	-0.6
2,017,802	-		MPMX19_01936	0.48	-1.2
2,017,802	-		MPMX19_01936	0.48	-0.9
2,017,936	+		MPMX19_01936	0.60	-0.8
2,017,936	+		MPMX19_01936	0.60	-1.3
2,017,936	+		MPMX19_01936	0.60	-1.6
2,017,936	+		MPMX19_01936	0.60	-0.2
2,017,936	+		MPMX19_01936	0.60	-1.5
2,017,936	+		MPMX19_01936	0.60	-0.5
2,017,936	+		MPMX19_01936	0.60	-1.0
2,017,936	+		MPMX19_01936	0.60	+0.2
2,017,936	+		MPMX19_01936	0.60	-0.7
2,017,936	+		MPMX19_01936	0.60	-1.0
2,017,936	+		MPMX19_01936	0.60	-0.5
2,017,936	+		MPMX19_01936	0.60	-0.4
2,017,936	+		MPMX19_01936	0.60	-1.7
2,017,936	+		MPMX19_01936	0.60	-1.1
2,017,936	+		MPMX19_01936	0.60	-1.4
2,017,936	+		MPMX19_01936	0.60	-0.4
2,017,936	+		MPMX19_01936	0.60	-0.6
2,017,936	+		MPMX19_01936	0.60	+0.6
2,017,936	+		MPMX19_01936	0.60	-1.9
2,017,937	-		MPMX19_01936	0.60	-1.7
2,017,937	-		MPMX19_01936	0.60	-1.5
2,017,937	-		MPMX19_01936	0.60	-0.2
2,017,937	-		MPMX19_01936	0.60	-2.1
2,017,937	-		MPMX19_01936	0.60	-0.5
2,017,937	-		MPMX19_01936	0.60	-1.3
2,017,937	-		MPMX19_01936	0.60	-2.4
2,017,937	-		MPMX19_01936	0.60	-1.9
2,017,937	-		MPMX19_01936	0.60	-0.6
2,017,937	-		MPMX19_01936	0.60	-2.9
2,017,937	-		MPMX19_01936	0.60	-0.8
2,018,239	+		MPMX19_01936	0.86	-0.6
2,018,239	+		MPMX19_01936	0.86	-1.2
2,018,239	+		MPMX19_01936	0.86	-1.2
2,018,239	+		MPMX19_01936	0.86	-1.0
2,018,240	-		MPMX19_01936	0.86	-1.1
2,018,240	-		MPMX19_01936	0.86	-1.0
2,018,240	-		MPMX19_01936	0.86	-1.4
2,018,848	+		MPMX19_01937	0.29	-0.9
2,018,848	+		MPMX19_01937	0.29	-0.8
2,018,848	+		MPMX19_01937	0.29	-0.4
2,018,848	+		MPMX19_01937	0.29	+0.5
2,018,848	+		MPMX19_01937	0.29	-0.7
2,018,848	+		MPMX19_01937	0.29	-0.5
2,018,848	+		MPMX19_01937	0.29	-0.9
2,018,848	+		MPMX19_01937	0.29	-1.3
2,018,848	+		MPMX19_01937	0.29	-0.4
2,018,848	+		MPMX19_01937	0.29	-1.7
2,018,848	+		MPMX19_01937	0.29	-0.7
2,018,849	-		MPMX19_01937	0.29	-0.4
2,018,849	-		MPMX19_01937	0.29	-2.1
2,018,849	-		MPMX19_01937	0.29	-0.3
2,018,849	-		MPMX19_01937	0.29	-0.2
2,018,849	-		MPMX19_01937	0.29	-1.5
2,018,849	-		MPMX19_01937	0.29	-1.6
2,018,849	-		MPMX19_01937	0.29	+0.9
2,018,849	-		MPMX19_01937	0.29	-0.8
2,018,849	-		MPMX19_01937	0.29	-1.7
2,018,849	-		MPMX19_01937	0.29	-2.2
2,018,851	+		MPMX19_01937	0.30	-0.7
2,018,851	+		MPMX19_01937	0.30	-0.5
2,018,851	+		MPMX19_01937	0.30	-1.6
2,018,852	-		MPMX19_01937	0.30	-1.5
2,018,852	-		MPMX19_01937	0.30	-1.7
2,019,283	+		MPMX19_01937	0.59	-2.0
2,019,283	+		MPMX19_01937	0.59	-0.6
2,019,283	+		MPMX19_01937	0.59	-0.1
2,019,283	+		MPMX19_01937	0.59	-0.5
2,019,283	+		MPMX19_01937	0.59	-0.4
2,019,283	+		MPMX19_01937	0.59	-1.4
2,019,283	+		MPMX19_01937	0.59	-0.8
2,019,283	+		MPMX19_01937	0.59	-1.8
2,019,283	+		MPMX19_01937	0.59	-1.0
2,019,283	+		MPMX19_01937	0.59	-2.0
2,019,283	+		MPMX19_01937	0.59	+0.4
2,019,283	+		MPMX19_01937	0.59	-0.8
2,019,283	+		MPMX19_01937	0.59	-2.3
2,019,283	+		MPMX19_01937	0.59	-1.5
2,019,283	+		MPMX19_01937	0.59	-1.4
2,019,283	+		MPMX19_01937	0.59	-0.3
2,019,284	-		MPMX19_01937	0.59	-0.3
2,019,284	-		MPMX19_01937	0.59	-1.2
2,019,284	-		MPMX19_01937	0.59	+0.6
2,019,284	-		MPMX19_01937	0.59	-1.1
2,019,284	-		MPMX19_01937	0.59	-0.8
2,019,284	-		MPMX19_01937	0.59	-0.7