Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01211

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,261,100	+				+0.1
1,261,100	+				-0.6
1,261,100	+				+0.4
1,261,100	+				-1.7
1,261,100	+				-0.5
1,261,100	+				+0.3
1,261,100	+				-0.6
1,261,101	-				-0.1
1,261,101	-				+0.5
1,261,101	-				-1.4
1,261,101	-				-1.7
1,261,101	-				-0.6
1,261,101	-				+1.0
1,261,101	-				+0.1
1,261,101	-				-0.9
1,261,101	-				+0.9
1,261,101	-				-0.2
1,261,419	+		MPMX19_01210	0.29	+0.1
1,261,419	+		MPMX19_01210	0.29	+0.1
1,261,419	+		MPMX19_01210	0.29	-0.6
1,261,419	+		MPMX19_01210	0.29	-0.4
1,261,419	+		MPMX19_01210	0.29	-1.0
1,261,419	+		MPMX19_01210	0.29	-0.8
1,261,419	+		MPMX19_01210	0.29	-1.3
1,261,420	-		MPMX19_01210	0.29	-0.9
1,261,420	-		MPMX19_01210	0.29	-0.5
1,261,420	-		MPMX19_01210	0.29	-0.6
1,261,420	-		MPMX19_01210	0.29	-0.5
1,261,420	-		MPMX19_01210	0.29	-0.6
1,261,420	-		MPMX19_01210	0.29	-0.8
1,261,425	+		MPMX19_01210	0.30	-0.1
1,261,425	+		MPMX19_01210	0.30	-0.6
1,261,425	+		MPMX19_01210	0.30	-0.6
1,261,425	+		MPMX19_01210	0.30	+0.1
1,261,425	+		MPMX19_01210	0.30	-1.9
1,261,425	+		MPMX19_01210	0.30	-1.1
1,261,444	-		MPMX19_01210	0.32	+1.5
1,261,547	+		MPMX19_01210	0.44	+1.4
1,261,547	+		MPMX19_01210	0.44	+0.4
1,261,547	+		MPMX19_01210	0.44	-0.5
1,261,547	+		MPMX19_01210	0.44	-0.9
1,261,547	+		MPMX19_01210	0.44	-1.0
1,261,547	+		MPMX19_01210	0.44	-0.1
1,261,548	-		MPMX19_01210	0.44	-1.1
1,261,548	-		MPMX19_01210	0.44	-1.0
1,261,548	-		MPMX19_01210	0.44	-0.3
1,261,548	-		MPMX19_01210	0.44	-0.1
1,261,548	-		MPMX19_01210	0.44	-0.5
1,261,548	-		MPMX19_01210	0.44	-2.1
1,261,548	-		MPMX19_01210	0.44	+0.5
1,261,574	+		MPMX19_01210	0.47	+0.4
1,261,574	+		MPMX19_01210	0.47	-1.8
1,261,574	+		MPMX19_01210	0.47	-0.2
1,261,574	+		MPMX19_01210	0.47	-0.1
1,261,574	+		MPMX19_01210	0.47	+0.3
1,261,574	+		MPMX19_01210	0.47	-0.8
1,261,574	+		MPMX19_01210	0.47	-0.6
1,261,574	+		MPMX19_01210	0.47	-0.1
1,261,574	+		MPMX19_01210	0.47	-1.0
1,261,575	-		MPMX19_01210	0.47	-1.1
1,261,575	-		MPMX19_01210	0.47	+0.1
1,261,667	+		MPMX19_01210	0.57	+0.8
1,261,668	-		MPMX19_01210	0.57	-0.2
1,261,757	+		MPMX19_01210	0.67	-2.0
1,261,757	+		MPMX19_01210	0.67	-0.2
1,261,757	+		MPMX19_01210	0.67	+0.4
1,261,757	+		MPMX19_01210	0.67	-0.3
1,261,757	+		MPMX19_01210	0.67	+0.5
1,261,757	+		MPMX19_01210	0.67	-0.0
1,261,757	+		MPMX19_01210	0.67	-0.5
1,261,758	-		MPMX19_01210	0.67	-1.3
1,261,758	-		MPMX19_01210	0.67	+0.4
1,261,758	-		MPMX19_01210	0.67	-0.6
1,261,758	-		MPMX19_01210	0.67	+0.7
1,261,758	-		MPMX19_01210	0.67	-0.1
1,261,758	-		MPMX19_01210	0.67	+1.3
1,261,758	-		MPMX19_01210	0.67	+0.4
1,261,758	-		MPMX19_01210	0.67	-1.0
1,261,758	-		MPMX19_01210	0.67	+0.6
1,261,820	+		MPMX19_01210	0.74	-1.1
1,261,820	+		MPMX19_01210	0.74	+0.2
1,261,820	+		MPMX19_01210	0.74	-1.4
1,261,820	+		MPMX19_01210	0.74	+0.4
1,261,820	+		MPMX19_01210	0.74	+0.0
1,261,820	+		MPMX19_01210	0.74	-0.3
1,261,820	+		MPMX19_01210	0.74	+1.0
1,261,820	+		MPMX19_01210	0.74	-0.2
1,261,820	+		MPMX19_01210	0.74	-0.0
1,261,820	+		MPMX19_01210	0.74	+0.5
1,261,820	+		MPMX19_01210	0.74	-1.5
1,261,820	+		MPMX19_01210	0.74	+0.0
1,261,820	+		MPMX19_01210	0.74	-1.5
1,261,820	+		MPMX19_01210	0.74	-0.4
1,261,821	-		MPMX19_01210	0.74	-1.1
1,261,821	-		MPMX19_01210	0.74	+0.4
1,261,821	-		MPMX19_01210	0.74	+0.7
1,261,821	-		MPMX19_01210	0.74	-0.6
1,261,821	-		MPMX19_01210	0.74	-1.5
1,261,821	-		MPMX19_01210	0.74	-1.2
1,261,821	-		MPMX19_01210	0.74	-0.8
1,261,821	-		MPMX19_01210	0.74	-0.1
1,261,821	-		MPMX19_01210	0.74	+1.7
1,261,821	-		MPMX19_01210	0.74	-0.2
1,261,821	-		MPMX19_01210	0.74	-0.1
1,261,821	-		MPMX19_01210	0.74	-0.9
1,261,821	-		MPMX19_01210	0.74	-1.1
1,261,821	-		MPMX19_01210	0.74	+1.1
1,261,821	-		MPMX19_01210	0.74	+0.4
1,261,821	-		MPMX19_01210	0.74	-2.0
1,261,913	+		MPMX19_01210	0.85	+0.9
1,261,913	+		MPMX19_01210	0.85	-0.1
1,261,913	+		MPMX19_01210	0.85	-1.0
1,261,913	+		MPMX19_01210	0.85	-0.6
1,261,913	+		MPMX19_01210	0.85	+1.4
1,261,913	+		MPMX19_01210	0.85	-1.1
1,261,913	+		MPMX19_01210	0.85	-0.8
1,261,913	+		MPMX19_01210	0.85	-0.3
1,261,913	+		MPMX19_01210	0.85	+0.5
1,261,913	+		MPMX19_01210	0.85	-0.8
1,261,913	+		MPMX19_01210	0.85	-1.6
1,261,913	+		MPMX19_01210	0.85	-0.4
1,261,913	+		MPMX19_01210	0.85	+1.0
1,261,913	+		MPMX19_01210	0.85	-0.6
1,261,913	+		MPMX19_01210	0.85	-1.1
1,261,913	+		MPMX19_01210	0.85	-1.0
1,261,913	+		MPMX19_01210	0.85	-0.9
1,261,913	+		MPMX19_01210	0.85	-0.9
1,261,914	-		MPMX19_01210	0.85	-1.1
1,261,914	-		MPMX19_01210	0.85	-2.4
1,261,914	-		MPMX19_01210	0.85	+0.1
1,261,914	-		MPMX19_01210	0.85	-2.3
1,261,914	-		MPMX19_01210	0.85	+1.5
1,261,914	-		MPMX19_01210	0.85	-0.2
1,261,914	-		MPMX19_01210	0.85	+0.4
1,261,914	-		MPMX19_01210	0.85	-0.9
1,261,914	-		MPMX19_01210	0.85	-0.3
1,261,914	-		MPMX19_01210	0.85	-0.1
1,261,914	-		MPMX19_01210	0.85	+1.3
1,261,914	-		MPMX19_01210	0.85	-0.4
1,261,914	-		MPMX19_01210	0.85	+0.1
1,261,914	-		MPMX19_01210	0.85	-0.5
1,261,914	-		MPMX19_01210	0.85	-1.6
1,261,914	-		MPMX19_01210	0.85	+0.9
1,261,914	-		MPMX19_01210	0.85	-0.4
1,262,006	+				+0.2
1,262,087	+				-0.0
1,262,087	+				-1.2
1,262,087	+				-0.2
1,262,088	-				+1.3
1,262,088	-				+0.9
1,262,088	-				+0.3
1,262,088	-				+0.5
1,262,088	-				-0.3
1,262,259	+		MPMX19_01211	0.20	-0.1
1,262,259	+		MPMX19_01211	0.20	+0.0
1,262,259	+		MPMX19_01211	0.20	-0.9
1,262,259	+		MPMX19_01211	0.20	-1.4
1,262,259	+		MPMX19_01211	0.20	-1.0
1,262,259	+		MPMX19_01211	0.20	+0.5
1,262,260	-		MPMX19_01211	0.20	-0.9
1,262,260	-		MPMX19_01211	0.20	-2.1
1,262,260	-		MPMX19_01211	0.20	+1.9
1,262,260	-		MPMX19_01211	0.20	+1.2
1,262,260	-		MPMX19_01211	0.20	-1.4
1,262,260	-		MPMX19_01211	0.20	+0.1
1,262,260	-		MPMX19_01211	0.20	-0.5
1,262,287	+		MPMX19_01211	0.23	-1.6
1,262,287	+		MPMX19_01211	0.23	+0.4
1,262,287	+		MPMX19_01211	0.23	-0.2
1,262,287	+		MPMX19_01211	0.23	+0.4
1,262,287	+		MPMX19_01211	0.23	+1.1
1,262,288	-		MPMX19_01211	0.24	+0.5
1,262,288	-		MPMX19_01211	0.24	-1.8
1,262,295	+		MPMX19_01211	0.24	-0.0
1,262,295	+		MPMX19_01211	0.24	-1.2
1,262,295	+		MPMX19_01211	0.24	-1.3
1,262,295	+		MPMX19_01211	0.24	-0.9
1,262,296	-		MPMX19_01211	0.24	+0.0
1,262,296	-		MPMX19_01211	0.24	+0.1
1,262,296	-		MPMX19_01211	0.24	-2.5
1,262,296	-		MPMX19_01211	0.24	+0.6
1,262,296	-		MPMX19_01211	0.24	-1.3
1,262,296	-		MPMX19_01211	0.24	+0.1
1,262,296	-		MPMX19_01211	0.24	-0.3
1,262,334	+		MPMX19_01211	0.28	-0.3
1,262,343	+		MPMX19_01211	0.29	-1.0
1,262,344	-		MPMX19_01211	0.30	+0.2
1,262,344	-		MPMX19_01211	0.30	-1.6
1,262,344	-		MPMX19_01211	0.30	-0.6
1,262,344	-		MPMX19_01211	0.30	-0.6
1,262,649	+		MPMX19_01211	0.62	+0.0
1,262,649	+		MPMX19_01211	0.62	+1.0
1,262,649	+		MPMX19_01211	0.62	+0.2
1,262,649	+		MPMX19_01211	0.62	-0.9
1,262,649	+		MPMX19_01211	0.62	-0.3
1,262,649	+		MPMX19_01211	0.62	-0.4
1,262,649	+		MPMX19_01211	0.62	-0.9
1,262,650	-		MPMX19_01211	0.63	-0.6
1,262,650	-		MPMX19_01211	0.63	-1.0
1,262,650	-		MPMX19_01211	0.63	+0.9
1,262,650	-		MPMX19_01211	0.63	-0.5
1,262,650	-		MPMX19_01211	0.63	-1.4
1,262,650	-		MPMX19_01211	0.63	+0.1
1,262,650	-		MPMX19_01211	0.63	-0.8
1,262,650	-		MPMX19_01211	0.63	+0.0
1,262,754	+		MPMX19_01211	0.74	-2.6
1,262,754	+		MPMX19_01211	0.74	+0.7
1,262,754	+		MPMX19_01211	0.74	-0.6
1,262,754	+		MPMX19_01211	0.74	+0.2
1,262,754	+		MPMX19_01211	0.74	-0.3
1,262,754	+		MPMX19_01211	0.74	-0.4
1,262,754	+		MPMX19_01211	0.74	+0.1
1,262,754	+		MPMX19_01211	0.74	-0.9
1,262,754	+		MPMX19_01211	0.74	-1.6
1,262,754	+		MPMX19_01211	0.74	-0.3
1,262,754	+		MPMX19_01211	0.74	-1.5
1,262,755	-		MPMX19_01211	0.74	-0.8
1,262,755	-		MPMX19_01211	0.74	-1.8
1,262,755	-		MPMX19_01211	0.74	-0.9
1,262,755	-		MPMX19_01211	0.74	+0.1
1,262,755	-		MPMX19_01211	0.74	+0.0
1,262,755	-		MPMX19_01211	0.74	+0.5
1,262,756	+		MPMX19_01211	0.74	-0.6
1,262,756	+		MPMX19_01211	0.74	+0.1
1,262,756	+		MPMX19_01211	0.74	+1.3
1,262,756	+		MPMX19_01211	0.74	-0.0
1,262,756	+		MPMX19_01211	0.74	+1.1
1,262,756	+		MPMX19_01211	0.74	-0.2
1,262,757	-		MPMX19_01211	0.74	-0.8
1,262,757	-		MPMX19_01211	0.74	-1.3
1,262,757	-		MPMX19_01211	0.74	-0.1
1,263,025	+				+0.1
1,263,025	+				-1.1
1,263,025	+				+0.7
1,263,025	+				-0.5
1,263,026	-				-1.9
1,263,026	-				-0.9
1,263,074	+				+0.1
1,263,074	+				-0.1
1,263,074	+				-1.0
1,263,074	+				-1.3
1,263,074	+				-0.8
1,263,074	+				+0.3
1,263,094	+				+0.1
1,263,094	+				+1.4
1,263,094	+				-0.2
1,263,094	+				-1.1
1,263,094	+				+0.9
1,263,094	+				-0.8
1,263,094	+				-0.0
1,263,094	+				-1.5
1,263,094	+				+0.6