Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2097 and GFF2098 are separated by 29 nucleotides GFF2098 and GFF2099 are separated by 148 nucleotides GFF2099 and GFF2100 are separated by 48 nucleotides GFF2100 and GFF2101 overlap by 1 nucleotides
GFF2097 - ATP synthase subunit a, at 142,560 to 143,396
GFF2097
GFF2098 - hypothetical protein, at 143,426 to 143,818
GFF2098
GFF2099 - putative chromosome-partitioning protein ParB, at 143,967 to 144,827
GFF2099
GFF2100 - Sporulation initiation inhibitor protein Soj, at 144,876 to 145,637
GFF2100
GFF2101 - Ribosomal RNA small subunit methyltransferase G, at 145,637 to 146,260
GFF2101
Position (kb) 143
144
145 Strain fitness (log2 ratio) -2
-1
0
1 at 143.910 kb on + strand at 143.910 kb on + strand at 143.911 kb on - strand at 143.911 kb on - strand at 143.954 kb on + strand at 143.954 kb on + strand at 143.954 kb on + strand at 143.969 kb on - strand at 143.969 kb on - strand at 144.066 kb on - strand, within GFF2099 at 144.075 kb on - strand, within GFF2099 at 144.309 kb on - strand, within GFF2099 at 144.309 kb on - strand, within GFF2099 at 144.321 kb on - strand, within GFF2099 at 144.321 kb on - strand, within GFF2099 at 144.321 kb on - strand, within GFF2099 at 144.428 kb on + strand, within GFF2099 at 144.429 kb on - strand, within GFF2099 at 144.619 kb on - strand, within GFF2099 at 144.692 kb on - strand, within GFF2099 at 144.692 kb on - strand, within GFF2099 at 144.784 kb on - strand at 144.834 kb on - strand at 144.834 kb on - strand at 144.844 kb on - strand at 144.844 kb on - strand at 144.850 kb on - strand at 144.850 kb on - strand at 144.850 kb on - strand at 144.874 kb on - strand at 144.874 kb on - strand at 144.874 kb on - strand at 144.874 kb on - strand at 144.913 kb on + strand at 144.914 kb on - strand at 144.914 kb on - strand at 144.914 kb on - strand at 144.914 kb on - strand at 144.944 kb on - strand at 144.944 kb on - strand at 145.068 kb on - strand, within GFF2100 at 145.249 kb on - strand, within GFF2100 at 145.249 kb on - strand, within GFF2100 at 145.249 kb on - strand, within GFF2100 at 145.354 kb on - strand, within GFF2100 at 145.354 kb on - strand, within GFF2100 at 145.354 kb on - strand, within GFF2100 at 145.354 kb on - strand, within GFF2100 at 145.396 kb on + strand, within GFF2100 at 145.396 kb on + strand, within GFF2100 at 145.397 kb on - strand, within GFF2100 at 145.397 kb on - strand, within GFF2100 at 145.397 kb on - strand, within GFF2100 at 145.397 kb on - strand, within GFF2100 at 145.397 kb on - strand, within GFF2100 at 145.397 kb on - strand, within GFF2100 at 145.401 kb on - strand, within GFF2100 at 145.401 kb on - strand, within GFF2100 at 145.401 kb on - strand, within GFF2100 at 145.401 kb on - strand, within GFF2100 at 145.417 kb on - strand, within GFF2100 at 145.417 kb on - strand, within GFF2100 at 145.417 kb on - strand, within GFF2100 at 145.417 kb on - strand, within GFF2100 at 145.417 kb on - strand, within GFF2100 at 145.417 kb on - strand, within GFF2100 at 145.417 kb on - strand, within GFF2100 at 145.460 kb on - strand, within GFF2100 at 145.460 kb on - strand, within GFF2100 at 145.463 kb on + strand, within GFF2100 at 145.464 kb on - strand, within GFF2100 at 145.464 kb on - strand, within GFF2100 at 145.464 kb on - strand, within GFF2100 at 145.464 kb on - strand, within GFF2100 at 145.464 kb on - strand, within GFF2100 at 145.464 kb on - strand, within GFF2100 at 145.474 kb on - strand, within GFF2100 at 145.474 kb on - strand, within GFF2100 at 145.485 kb on - strand, within GFF2100 at 145.503 kb on - strand, within GFF2100 at 145.639 kb on - strand at 145.639 kb on - strand at 145.639 kb on - strand at 145.643 kb on - strand at 145.643 kb on - strand at 145.643 kb on - strand at 145.643 kb on - strand at 145.643 kb on - strand at 145.643 kb on - strand at 145.787 kb on + strand, within GFF2101 at 145.788 kb on - strand, within GFF2101 at 145.788 kb on - strand, within GFF2101 at 145.788 kb on - strand, within GFF2101 at 145.788 kb on - strand, within GFF2101 at 145.788 kb on - strand, within GFF2101 at 145.808 kb on - strand, within GFF2101
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 143,910 + -0.7 143,910 + +1.2 143,911 - -0.2 143,911 - -1.6 143,954 + -0.9 143,954 + -0.5 143,954 + -1.2 143,969 - -1.1 143,969 - -1.4 144,066 - GFF2099 0.11 -0.4 144,075 - GFF2099 0.13 -0.9 144,309 - GFF2099 0.40 +0.2 144,309 - GFF2099 0.40 +0.5 144,321 - GFF2099 0.41 +0.1 144,321 - GFF2099 0.41 -0.9 144,321 - GFF2099 0.41 -0.5 144,428 + GFF2099 0.54 -1.4 144,429 - GFF2099 0.54 -1.1 144,619 - GFF2099 0.76 -2.1 144,692 - GFF2099 0.84 -1.3 144,692 - GFF2099 0.84 +0.4 144,784 - -0.9 144,834 - -0.6 144,834 - +0.9 144,844 - -0.1 144,844 - +0.5 144,850 - -0.4 144,850 - +0.9 144,850 - -0.4 144,874 - -1.6 144,874 - +0.3 144,874 - -0.9 144,874 - -0.4 144,913 + +0.6 144,914 - -0.9 144,914 - -0.6 144,914 - -0.4 144,914 - -1.1 144,944 - -1.3 144,944 - -0.1 145,068 - GFF2100 0.25 +0.5 145,249 - GFF2100 0.49 +0.1 145,249 - GFF2100 0.49 -0.1 145,249 - GFF2100 0.49 -1.0 145,354 - GFF2100 0.63 -0.5 145,354 - GFF2100 0.63 +0.5 145,354 - GFF2100 0.63 -1.1 145,354 - GFF2100 0.63 -1.6 145,396 + GFF2100 0.68 -0.1 145,396 + GFF2100 0.68 -0.9 145,397 - GFF2100 0.68 -1.3 145,397 - GFF2100 0.68 -0.9 145,397 - GFF2100 0.68 -0.6 145,397 - GFF2100 0.68 -0.6 145,397 - GFF2100 0.68 +0.2 145,397 - GFF2100 0.68 -0.5 145,401 - GFF2100 0.69 -0.6 145,401 - GFF2100 0.69 -0.1 145,401 - GFF2100 0.69 +0.5 145,401 - GFF2100 0.69 -0.6 145,417 - GFF2100 0.71 +1.3 145,417 - GFF2100 0.71 +0.6 145,417 - GFF2100 0.71 -0.3 145,417 - GFF2100 0.71 -0.6 145,417 - GFF2100 0.71 -0.9 145,417 - GFF2100 0.71 +0.9 145,417 - GFF2100 0.71 -1.4 145,460 - GFF2100 0.77 -2.1 145,460 - GFF2100 0.77 -2.4 145,463 + GFF2100 0.77 -2.2 145,464 - GFF2100 0.77 +0.5 145,464 - GFF2100 0.77 -0.2 145,464 - GFF2100 0.77 -1.1 145,464 - GFF2100 0.77 -0.7 145,464 - GFF2100 0.77 +0.1 145,464 - GFF2100 0.77 -1.4 145,474 - GFF2100 0.78 -0.4 145,474 - GFF2100 0.78 +0.0 145,485 - GFF2100 0.80 -2.5 145,503 - GFF2100 0.82 +0.2 145,639 - -0.8 145,639 - -1.6 145,639 - -0.3 145,643 - +0.0 145,643 - -0.3 145,643 - -1.1 145,643 - -0.4 145,643 - +0.9 145,643 - -0.7 145,787 + GFF2101 0.24 -1.9 145,788 - GFF2101 0.24 -1.2 145,788 - GFF2101 0.24 -0.3 145,788 - GFF2101 0.24 -1.6 145,788 - GFF2101 0.24 -1.5 145,788 - GFF2101 0.24 -1.6 145,808 - GFF2101 0.27 +0.2
Or see this region's nucleotide sequence