Strain Fitness in Methylophilus sp. DMC18 around GFF101

Experiment: Methanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Methanol (C)
107,549	+				-0.4
107,549	+				+0.1
107,549	+				-0.7
107,550	-				-0.7
107,550	-				-1.0
107,550	-				-0.4
107,550	-				-0.0
107,560	+				+0.2
107,561	-				-0.6
107,626	+				-0.3
107,626	+				-1.2
107,626	+				+0.2
107,626	+				-1.0
107,626	+				-1.6
107,626	+				+0.6
107,626	+				+0.1
107,627	-				-0.2
107,627	-				-0.4
107,627	-				-0.0
107,627	-				-1.4
107,627	-				-0.0
107,627	-				-1.0
107,717	+		GFF100	0.18	+0.2
107,717	+		GFF100	0.18	-0.2
107,717	+		GFF100	0.18	-0.4
107,717	+		GFF100	0.18	-0.6
107,718	-		GFF100	0.18	-1.2
107,758	-		GFF100	0.23	-0.6
107,758	-		GFF100	0.23	+0.2
107,775	+		GFF100	0.25	-0.8
107,775	+		GFF100	0.25	+1.2
107,781	+		GFF100	0.25	-0.6
107,781	+		GFF100	0.25	+0.5
107,781	+		GFF100	0.25	-2.4
107,781	+		GFF100	0.25	-0.0
107,781	+		GFF100	0.25	-0.5
107,781	+		GFF100	0.25	-0.4
107,782	-		GFF100	0.26	-0.2
107,782	-		GFF100	0.26	+1.0
107,782	-		GFF100	0.26	+0.1
107,782	-		GFF100	0.26	-0.6
107,782	-		GFF100	0.26	-1.2
107,782	-		GFF100	0.26	+0.3
107,782	-		GFF100	0.26	-1.1
107,782	-		GFF100	0.26	-1.4
107,782	-		GFF100	0.26	-1.6
107,782	-		GFF100	0.26	+0.0
107,793	+		GFF100	0.27	+0.1
107,793	+		GFF100	0.27	-2.0
107,793	+		GFF100	0.27	-0.8
107,794	-		GFF100	0.27	-1.0
107,794	-		GFF100	0.27	+0.2
107,794	-		GFF100	0.27	-1.4
107,998	+		GFF100	0.50	+0.5
107,998	+		GFF100	0.50	-1.0
107,999	-		GFF100	0.50	+0.8
108,018	+		GFF100	0.53	-1.0
108,052	+		GFF100	0.56	-0.5
108,053	-		GFF100	0.57	+1.0
108,080	+		GFF100	0.60	-0.2
108,080	+		GFF100	0.60	-1.0
108,081	-		GFF100	0.60	-0.6
108,081	-		GFF100	0.60	-0.1
108,081	-		GFF100	0.60	+0.6
108,081	-		GFF100	0.60	-1.6
108,081	-		GFF100	0.60	-0.7
108,115	-		GFF100	0.64	+0.3
108,162	-		GFF100	0.69	+0.2
108,165	+		GFF100	0.69	-1.7
108,165	+		GFF100	0.69	-1.6
108,192	+		GFF100	0.73	+0.2
108,252	-		GFF100	0.79	+0.2
108,392	+				-1.0
108,393	-				+0.2
108,402	+				-0.4
108,402	+				-1.0
108,402	+				+2.3
108,403	-				+0.6
108,403	-				-1.6
108,403	-				+0.6
108,403	-				-0.8
108,439	-				-0.7
108,509	-				-0.0
108,519	+				-1.0
108,520	-				-2.4
108,533	+				+0.5
108,573	+				+1.2
108,573	+				-0.4
108,573	+				-1.0
108,579	+				-1.6
108,579	+				+0.0
108,579	+				-0.3
108,580	-				-0.3
108,580	-				-0.0
108,580	-				+1.0
108,580	-				-1.0
108,580	-				-1.7
108,580	-				-0.5
108,605	+				-2.9
108,605	+				-1.0
108,606	-				+0.7
108,606	-				+0.6
108,606	-				-0.8
108,606	-				+0.4
108,606	-				-0.8
108,630	+				-1.4
108,692	+				+0.5
108,704	-				-0.3
108,704	-				-0.5
108,737	+				-1.0
108,737	+				+1.3
108,738	-				-1.8
108,738	-				+0.4
108,738	-				-0.4
108,738	-				-0.2
108,738	-				-1.2
108,738	-				-1.0
108,787	-		GFF101	0.12	-1.4
108,795	-		GFF101	0.12	-1.2
108,798	+		GFF101	0.13	+0.7
108,799	-		GFF101	0.13	-1.8
108,799	-		GFF101	0.13	-1.5
109,001	-		GFF101	0.22	-0.4
109,001	-		GFF101	0.22	-0.4
109,005	+		GFF101	0.22	-1.0
109,005	+		GFF101	0.22	+0.6
109,005	+		GFF101	0.22	+0.6
109,006	-		GFF101	0.22	-0.8
109,028	-		GFF101	0.23	-1.2
109,042	+		GFF101	0.24	+0.6
109,114	-		GFF101	0.27	-1.0
109,155	+		GFF101	0.29	-1.2
109,155	+		GFF101	0.29	+0.8
109,158	+		GFF101	0.29	-0.0
109,158	+		GFF101	0.29	-1.6
109,158	+		GFF101	0.29	-0.3
109,158	+		GFF101	0.29	-0.8
109,159	-		GFF101	0.29	+1.0
109,159	-		GFF101	0.29	-0.8
109,159	-		GFF101	0.29	-1.0
109,159	-		GFF101	0.29	+0.5
109,159	-		GFF101	0.29	-0.4
109,159	-		GFF101	0.29	+0.6
109,159	-		GFF101	0.29	-0.3
109,159	-		GFF101	0.29	-1.0
109,159	-		GFF101	0.29	-0.3
109,184	+		GFF101	0.30	-0.4
109,184	+		GFF101	0.30	-0.0
109,184	+		GFF101	0.30	-0.5
109,185	-		GFF101	0.30	-0.4
109,185	-		GFF101	0.30	-0.8
109,185	-		GFF101	0.30	-0.5
109,185	-		GFF101	0.30	+0.5
109,185	-		GFF101	0.30	+0.0
109,196	+		GFF101	0.31	-0.4
109,197	-		GFF101	0.31	+1.0
109,197	-		GFF101	0.31	-1.0
109,197	-		GFF101	0.31	+0.3
109,197	-		GFF101	0.31	-0.0
109,206	-		GFF101	0.31	-0.3
109,206	-		GFF101	0.31	+0.4
109,206	-		GFF101	0.31	+1.3
109,215	+		GFF101	0.32	+0.5
109,215	+		GFF101	0.32	+1.0
109,216	-		GFF101	0.32	-0.0
109,216	-		GFF101	0.32	-0.6
109,263	+		GFF101	0.34	-0.0
109,263	+		GFF101	0.34	-0.2
109,263	+		GFF101	0.34	-1.0
109,263	+		GFF101	0.34	-0.4
109,263	+		GFF101	0.34	-0.8
109,264	-		GFF101	0.34	-0.3
109,304	+		GFF101	0.36	-0.1
109,304	+		GFF101	0.36	+0.1
109,305	-		GFF101	0.36	-0.4
109,305	-		GFF101	0.36	-1.0
109,305	-		GFF101	0.36	-1.6
109,305	-		GFF101	0.36	-0.3
109,305	-		GFF101	0.36	+0.1
109,305	-		GFF101	0.36	-1.0
109,305	-		GFF101	0.36	-1.0
109,363	+		GFF101	0.38	-0.4
109,363	+		GFF101	0.38	-0.2
109,364	-		GFF101	0.38	-1.7
109,364	-		GFF101	0.38	+0.6
109,420	-		GFF101	0.41	-1.4
109,428	+		GFF101	0.41	+1.7
109,428	+		GFF101	0.41	-1.0
109,428	+		GFF101	0.41	-0.2
109,429	-		GFF101	0.41	-1.0
109,429	-		GFF101	0.41	+1.2
109,429	-		GFF101	0.41	-1.0
109,429	-		GFF101	0.41	-0.2
109,429	-		GFF101	0.41	+0.2
109,429	-		GFF101	0.41	-0.2
109,429	-		GFF101	0.41	-0.4
109,449	-		GFF101	0.42	+0.8
109,449	-		GFF101	0.42	-0.5
109,497	+		GFF101	0.45	+0.5
109,497	+		GFF101	0.45	+0.1
109,497	+		GFF101	0.45	-0.7
109,498	-		GFF101	0.45	-1.0
109,498	-		GFF101	0.45	-0.6
109,498	-		GFF101	0.45	-1.0
109,519	+		GFF101	0.46	-0.7
109,520	-		GFF101	0.46	-0.3
109,543	-		GFF101	0.47	-0.3
109,543	-		GFF101	0.47	-0.2
109,564	-		GFF101	0.48	-0.6
109,564	-		GFF101	0.48	-1.9
109,570	-		GFF101	0.48	-0.5
109,570	-		GFF101	0.48	-0.8
109,571	+		GFF101	0.48	-0.5
109,571	+		GFF101	0.48	-1.8
109,572	-		GFF101	0.48	-0.6
109,572	-		GFF101	0.48	-0.1
109,572	-		GFF101	0.48	-0.4
109,575	+		GFF101	0.48	-0.0
109,575	+		GFF101	0.48	-0.0
109,575	+		GFF101	0.48	+0.2
109,576	-		GFF101	0.48	-1.4
109,576	-		GFF101	0.48	-0.6
109,576	-		GFF101	0.48	-0.9
109,576	-		GFF101	0.48	-1.1
109,578	+		GFF101	0.48	-1.0
109,578	+		GFF101	0.48	-2.0
109,578	+		GFF101	0.48	-1.8
109,579	-		GFF101	0.48	-0.4
109,579	-		GFF101	0.48	-0.9
109,579	-		GFF101	0.48	-0.7
109,579	-		GFF101	0.48	-0.8
109,611	+		GFF101	0.50	-1.0
109,612	-		GFF101	0.50	-0.4
109,662	+		GFF101	0.52	-0.6
109,671	-		GFF101	0.52	-0.6
109,690	-		GFF101	0.53	+0.5
109,690	-		GFF101	0.53	+0.6
109,690	-		GFF101	0.53	+0.5
109,690	-		GFF101	0.53	-0.0
109,694	+		GFF101	0.54	-0.8
109,694	+		GFF101	0.54	-0.8
109,694	+		GFF101	0.54	-2.2
109,694	+		GFF101	0.54	+0.7
109,694	+		GFF101	0.54	-0.0
109,694	+		GFF101	0.54	+0.8
109,695	-		GFF101	0.54	+0.5
109,695	-		GFF101	0.54	-0.5
109,695	-		GFF101	0.54	+0.0
109,695	-		GFF101	0.54	-1.4
109,695	-		GFF101	0.54	-1.0
109,695	-		GFF101	0.54	-0.4
109,695	-		GFF101	0.54	-0.8
109,695	-		GFF101	0.54	+0.4
109,695	-		GFF101	0.54	-0.2
109,695	-		GFF101	0.54	+0.8
109,695	-		GFF101	0.54	-1.8
109,726	+		GFF101	0.55	+0.6
109,726	+		GFF101	0.55	-1.9
109,726	+		GFF101	0.55	+0.7
109,727	-		GFF101	0.55	-1.4
109,727	-		GFF101	0.55	+0.7
109,727	-		GFF101	0.55	-1.8
109,727	-		GFF101	0.55	-1.4
109,753	+		GFF101	0.56	-0.0
109,753	-		GFF101	0.56	-1.2
109,804	-		GFF101	0.59	-0.2
109,821	-		GFF101	0.59	-0.5
109,860	+		GFF101	0.61	-2.8
109,861	-		GFF101	0.61	-0.8
109,930	-		GFF101	0.64	-1.0
109,930	-		GFF101	0.64	-1.0
109,946	-		GFF101	0.65	-0.3
109,981	-		GFF101	0.67	-1.4
110,000	+		GFF101	0.68	-0.4
110,009	-		GFF101	0.68	+0.6
110,027	+		GFF101	0.69	-0.0
110,028	-		GFF101	0.69	-0.3
110,094	-		GFF101	0.72	+1.0
110,094	-		GFF101	0.72	+0.7
110,129	+		GFF101	0.73	-1.4
110,130	-		GFF101	0.73	-0.4
110,236	-		GFF101	0.78	-1.3
110,236	-		GFF101	0.78	-0.0
110,248	-		GFF101	0.79	-1.2
110,259	+		GFF101	0.79	+0.4
110,259	+		GFF101	0.79	+0.6
110,259	+		GFF101	0.79	-0.4
110,259	+		GFF101	0.79	-1.0
110,259	+		GFF101	0.79	-0.7
110,259	+		GFF101	0.79	+0.3
110,259	+		GFF101	0.79	-2.6
110,259	+		GFF101	0.79	+1.0
110,259	+		GFF101	0.79	-0.6
110,260	-		GFF101	0.79	-1.9
110,260	-		GFF101	0.79	+0.8
110,260	-		GFF101	0.79	-1.2
110,260	-		GFF101	0.79	-0.4
110,260	-		GFF101	0.79	+0.8
110,260	-		GFF101	0.79	-0.4
110,260	-		GFF101	0.79	-0.0
110,260	-		GFF101	0.79	+0.4
110,261	+		GFF101	0.79	-1.8
110,262	-		GFF101	0.80	-0.1
110,263	+		GFF101	0.80	-0.0
110,263	+		GFF101	0.80	-1.0
110,263	+		GFF101	0.80	-1.0
110,263	+		GFF101	0.80	-0.3
110,264	-		GFF101	0.80	-0.0
110,264	-		GFF101	0.80	+0.5
110,264	-		GFF101	0.80	+0.5
110,264	-		GFF101	0.80	+0.2
110,303	-		GFF101	0.81	-0.5
110,335	+		GFF101	0.83	-0.6
110,335	+		GFF101	0.83	-0.9
110,335	+		GFF101	0.83	+0.1
110,336	-		GFF101	0.83	+1.0
110,336	-		GFF101	0.83	-1.7
110,336	-		GFF101	0.83	-1.0
110,338	+		GFF101	0.83	+1.0
110,338	+		GFF101	0.83	-0.5
110,339	-		GFF101	0.83	-1.6
110,339	-		GFF101	0.83	-0.6
110,339	-		GFF101	0.83	+0.4
110,355	+		GFF101	0.84	-1.0
110,390	+		GFF101	0.85	-1.8
110,390	+		GFF101	0.85	+0.5
110,390	+		GFF101	0.85	-0.2
110,390	+		GFF101	0.85	+0.5
110,390	+		GFF101	0.85	-0.0
110,391	-		GFF101	0.85	-1.2
110,391	-		GFF101	0.85	-1.2
110,391	-		GFF101	0.85	+0.1
110,391	-		GFF101	0.85	-2.0
110,391	-		GFF101	0.85	-0.3
110,391	-		GFF101	0.85	-0.0
110,395	+		GFF101	0.86	-1.0
110,396	-		GFF101	0.86	-1.3
110,396	-		GFF101	0.86	-0.0
110,396	-		GFF101	0.86	+0.6
110,434	-		GFF101	0.87	-0.6
110,434	-		GFF101	0.87	-1.4
110,455	-		GFF101	0.88	-1.4
110,468	-		GFF101	0.89	-1.0
110,522	+				+0.5
110,523	-				-1.3
110,578	+				+0.7
110,578	+				+0.2
110,579	-				-0.5
110,579	-				-0.0
110,623	+				-0.0
110,719	-				+0.2
110,719	-				-0.4
110,719	-				+0.2
110,750	+				-2.0
110,751	-				-0.7
110,751	-				-1.5
110,814	+				-0.0
110,814	+				-2.2
110,815	-				-0.2
110,815	-				+0.7
110,815	-				-0.5
110,817	+				-0.3
110,817	+				+0.4
110,818	-				-0.8
110,906	+		GFF102	0.10	+0.2
110,906	+		GFF102	0.10	-0.6
110,911	-		GFF102	0.11	-0.6
110,911	-		GFF102	0.11	-0.2
110,911	-		GFF102	0.11	-2.6
110,911	-		GFF102	0.11	-1.0
110,915	+		GFF102	0.11	+0.7
110,916	-		GFF102	0.11	-0.6
111,014	+		GFF102	0.23	+1.8
111,015	-		GFF102	0.23	+1.5
111,033	+		GFF102	0.25	-0.1
111,033	+		GFF102	0.25	-0.7
111,033	+		GFF102	0.25	-1.4
111,034	-		GFF102	0.25	+0.7
111,034	-		GFF102	0.25	+0.4
111,049	-		GFF102	0.27	-1.4
111,069	+		GFF102	0.29	-0.1
111,069	+		GFF102	0.29	-0.5
111,069	+		GFF102	0.29	-0.4
111,069	+		GFF102	0.29	-0.0
111,070	-		GFF102	0.29	-0.7
111,070	-		GFF102	0.29	-0.6
111,307	+		GFF102	0.56	-1.7
111,308	-		GFF102	0.56	-1.6
111,447	+		GFF102	0.72	+0.5
111,501	+		GFF102	0.78	-0.2
111,502	-		GFF102	0.79	-2.2
111,529	+		GFF102	0.82	-0.5
111,530	-		GFF102	0.82	-0.0
111,530	-		GFF102	0.82	+0.5
111,560	+		GFF102	0.85	-0.3
111,560	+		GFF102	0.85	-0.3
111,560	+		GFF102	0.85	-0.4
111,560	+		GFF102	0.85	-0.3
111,561	-		GFF102	0.85	-0.8
111,561	-		GFF102	0.85	+1.0
111,561	-		GFF102	0.85	-0.5
111,561	-		GFF102	0.85	-0.5
111,569	+		GFF102	0.86	+1.0
111,570	-		GFF102	0.86	-1.5
111,570	-		GFF102	0.86	-0.0
111,570	-		GFF102	0.86	-0.8
111,601	+				-0.8
111,601	+				-0.9
111,601	+				+0.2
111,602	-				-1.5
111,613	-				+0.2
111,613	-				-1.7
111,708	+				-0.9
111,708	+				+0.4