Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03699

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,136,799	+		MPMX19_03697	0.82	-1.1
1,136,799	+		MPMX19_03697	0.82	-0.3
1,136,799	+		MPMX19_03697	0.82	+0.1
1,136,799	+		MPMX19_03697	0.82	+0.3
1,136,799	+		MPMX19_03697	0.82	-0.1
1,136,799	+		MPMX19_03697	0.82	-0.5
1,136,799	+		MPMX19_03697	0.82	-0.2
1,136,799	+		MPMX19_03697	0.82	+0.2
1,136,799	+		MPMX19_03697	0.82	-0.6
1,136,799	+		MPMX19_03697	0.82	+0.7
1,136,799	+		MPMX19_03697	0.82	+0.2
1,136,799	+		MPMX19_03697	0.82	-1.8
1,136,799	+		MPMX19_03697	0.82	-0.1
1,136,800	-		MPMX19_03697	0.83	+1.6
1,136,800	-		MPMX19_03697	0.83	-0.6
1,136,800	-		MPMX19_03697	0.83	-0.3
1,136,800	-		MPMX19_03697	0.83	-0.2
1,136,800	-		MPMX19_03697	0.83	-0.3
1,136,800	-		MPMX19_03697	0.83	-0.6
1,136,800	-		MPMX19_03697	0.83	-1.7
1,136,800	-		MPMX19_03697	0.83	-0.5
1,136,800	-		MPMX19_03697	0.83	+0.6
1,137,044	+		MPMX19_03698	0.12	-1.6
1,137,044	+		MPMX19_03698	0.12	-0.2
1,137,044	+		MPMX19_03698	0.12	-1.1
1,137,044	+		MPMX19_03698	0.12	+0.2
1,137,044	+		MPMX19_03698	0.12	+0.8
1,137,044	+		MPMX19_03698	0.12	+1.9
1,137,045	-		MPMX19_03698	0.13	-1.1
1,137,045	-		MPMX19_03698	0.13	-1.0
1,137,045	-		MPMX19_03698	0.13	-1.8
1,137,045	-		MPMX19_03698	0.13	-0.4
1,137,115	+		MPMX19_03698	0.21	-0.2
1,137,116	+		MPMX19_03698	0.21	-1.0
1,137,116	+		MPMX19_03698	0.21	-0.6
1,137,116	+		MPMX19_03698	0.21	-0.8
1,137,116	+		MPMX19_03698	0.21	-1.4
1,137,116	+		MPMX19_03698	0.21	+0.6
1,137,116	+		MPMX19_03698	0.21	-2.0
1,137,116	+		MPMX19_03698	0.21	-0.5
1,137,116	+		MPMX19_03698	0.21	-1.0
1,137,116	+		MPMX19_03698	0.21	+0.6
1,137,117	-		MPMX19_03698	0.21	-0.4
1,137,117	-		MPMX19_03698	0.21	-0.8
1,137,117	-		MPMX19_03698	0.21	-1.4
1,137,117	-		MPMX19_03698	0.21	+0.5
1,137,117	-		MPMX19_03698	0.21	+0.5
1,137,117	-		MPMX19_03698	0.21	-0.7
1,137,117	-		MPMX19_03698	0.21	+0.6
1,137,272	+		MPMX19_03698	0.39	-0.6
1,137,272	+		MPMX19_03698	0.39	-1.7
1,137,272	+		MPMX19_03698	0.39	+0.6
1,137,290	+		MPMX19_03698	0.41	+1.0
1,137,290	+		MPMX19_03698	0.41	-1.2
1,137,291	-		MPMX19_03698	0.41	-0.3
1,137,291	-		MPMX19_03698	0.41	-2.1
1,137,291	-		MPMX19_03698	0.41	-0.6
1,137,291	-		MPMX19_03698	0.41	-1.2
1,137,291	-		MPMX19_03698	0.41	-1.0
1,137,305	+		MPMX19_03698	0.43	-1.4
1,137,305	+		MPMX19_03698	0.43	-0.7
1,137,305	+		MPMX19_03698	0.43	-1.2
1,137,305	+		MPMX19_03698	0.43	-0.1
1,137,305	+		MPMX19_03698	0.43	+0.6
1,137,306	-		MPMX19_03698	0.43	+1.0
1,137,306	-		MPMX19_03698	0.43	+0.5
1,137,535	+		MPMX19_03698	0.70	-0.7
1,137,535	+		MPMX19_03698	0.70	-1.3
1,137,535	+		MPMX19_03698	0.70	-1.0
1,137,535	+		MPMX19_03698	0.70	+1.6
1,137,535	+		MPMX19_03698	0.70	+0.3
1,137,535	+		MPMX19_03698	0.70	-0.2
1,137,536	-		MPMX19_03698	0.70	-0.3
1,137,536	-		MPMX19_03698	0.70	-2.1
1,137,623	+		MPMX19_03698	0.80	+0.2
1,137,623	+		MPMX19_03698	0.80	+0.3
1,137,624	-		MPMX19_03698	0.81	-1.0
1,137,624	-		MPMX19_03698	0.81	-0.4
1,137,624	-		MPMX19_03698	0.81	-0.5
1,137,624	-		MPMX19_03698	0.81	-0.5
1,137,650	+		MPMX19_03698	0.84	+1.6
1,137,650	+		MPMX19_03698	0.84	-0.8
1,137,650	+		MPMX19_03698	0.84	+0.4
1,137,650	+		MPMX19_03698	0.84	-0.0
1,137,650	+		MPMX19_03698	0.84	-1.3
1,137,650	+		MPMX19_03698	0.84	+0.6
1,137,650	+		MPMX19_03698	0.84	-0.4
1,137,650	+		MPMX19_03698	0.84	+0.2
1,137,650	+		MPMX19_03698	0.84	-0.1
1,137,650	+		MPMX19_03698	0.84	-1.7
1,137,650	+		MPMX19_03698	0.84	-1.2
1,137,650	+		MPMX19_03698	0.84	-1.0
1,137,651	-		MPMX19_03698	0.84	-0.3
1,137,651	-		MPMX19_03698	0.84	-0.3
1,137,651	-		MPMX19_03698	0.84	-1.1
1,137,651	-		MPMX19_03698	0.84	+0.5
1,137,651	-		MPMX19_03698	0.84	+1.6
1,137,651	-		MPMX19_03698	0.84	+0.6
1,137,880	+				-0.4
1,138,195	+		MPMX19_03699	0.38	+1.5
1,138,195	-		MPMX19_03699	0.38	-0.8
1,138,196	-		MPMX19_03699	0.38	-0.6
1,138,196	-		MPMX19_03699	0.38	-1.2
1,138,196	-		MPMX19_03699	0.38	+0.4
1,138,196	-		MPMX19_03699	0.38	+0.6
1,138,561	-		MPMX19_03699	0.72	+0.1
1,138,641	-		MPMX19_03699	0.80	+0.9
1,138,823	-				-0.3
1,138,823	-				+0.2
1,138,988	+				-1.7
1,138,988	+				-0.4
1,138,988	+				-2.4
1,138,988	+				+1.6
1,138,988	+				-0.5
1,138,988	+				-1.1
1,138,988	+				+1.3
1,138,988	+				-0.5
1,138,988	+				-0.9
1,138,988	+				+1.9
1,138,988	+				-1.4
1,138,988	+				+1.1
1,138,988	+				-0.4
1,138,988	+				+0.0
1,138,988	+				-0.7
1,138,988	+				-1.1
1,138,988	+				-0.2
1,138,988	+				-0.1
1,138,988	+				+0.9
1,138,989	-				-0.7
1,138,989	-				+0.7
1,138,989	-				-1.1
1,138,989	-				-0.9
1,138,989	-				-1.9
1,138,989	-				-2.7
1,138,989	-				-2.6
1,138,989	-				-0.5
1,138,989	-				+0.6
1,138,989	-				-0.3
1,138,989	-				-0.6
1,138,989	-				+0.0
1,138,989	-				-0.1
1,138,997	+				+1.2
1,138,997	+				-1.2
1,138,998	-				-1.5
1,139,135	+		MPMX19_03700	0.18	+0.6
1,139,135	+		MPMX19_03700	0.18	+0.6
1,139,135	+		MPMX19_03700	0.18	-2.0
1,139,135	+		MPMX19_03700	0.18	+0.4
1,139,135	+		MPMX19_03700	0.18	+1.6
1,139,135	+		MPMX19_03700	0.18	+0.2
1,139,135	+		MPMX19_03700	0.18	-1.6
1,139,135	+		MPMX19_03700	0.18	+1.1
1,139,135	+		MPMX19_03700	0.18	+0.3
1,139,135	+		MPMX19_03700	0.18	-0.1
1,139,135	+		MPMX19_03700	0.18	-1.4
1,139,135	+		MPMX19_03700	0.18	+0.1
1,139,135	+		MPMX19_03700	0.18	-0.8
1,139,135	+		MPMX19_03700	0.18	-1.5
1,139,136	-		MPMX19_03700	0.18	-0.6
1,139,136	-		MPMX19_03700	0.18	-2.3
1,139,136	-		MPMX19_03700	0.18	-1.0
1,139,136	-		MPMX19_03700	0.18	-0.7
1,139,136	-		MPMX19_03700	0.18	-3.1
1,139,136	-		MPMX19_03700	0.18	-0.7
1,139,136	-		MPMX19_03700	0.18	+0.9
1,139,136	-		MPMX19_03700	0.18	-1.6
1,139,136	-		MPMX19_03700	0.18	-0.1
1,139,136	-		MPMX19_03700	0.18	-1.0
1,139,136	-		MPMX19_03700	0.18	-0.6
1,139,136	-		MPMX19_03700	0.18	-1.7
1,139,136	-		MPMX19_03700	0.18	-0.7
1,139,136	-		MPMX19_03700	0.18	+0.2
1,139,136	-		MPMX19_03700	0.18	-0.9
1,139,279	+		MPMX19_03700	0.31	-1.0
1,139,279	+		MPMX19_03700	0.31	-1.4
1,139,280	-		MPMX19_03700	0.31	-0.2
1,139,280	-		MPMX19_03700	0.31	-0.7
1,139,280	-		MPMX19_03700	0.31	-0.5
1,139,282	+		MPMX19_03700	0.31	+0.4
1,139,282	+		MPMX19_03700	0.31	-0.3
1,139,282	+		MPMX19_03700	0.31	+0.0
1,139,283	-		MPMX19_03700	0.32	-0.8
1,139,283	-		MPMX19_03700	0.32	+0.9
1,139,283	-		MPMX19_03700	0.32	-2.1
1,139,283	-		MPMX19_03700	0.32	-0.6
1,139,283	-		MPMX19_03700	0.32	-0.2
1,139,283	-		MPMX19_03700	0.32	-2.6
1,139,283	-		MPMX19_03700	0.32	-0.2
1,139,283	-		MPMX19_03700	0.32	+0.4
1,139,549	+		MPMX19_03700	0.55	+0.6
1,139,579	+		MPMX19_03700	0.58	-0.2
1,139,579	+		MPMX19_03700	0.58	-1.0
1,139,579	+		MPMX19_03700	0.58	-0.5
1,139,579	+		MPMX19_03700	0.58	+0.4
1,139,579	+		MPMX19_03700	0.58	+0.2
1,139,579	+		MPMX19_03700	0.58	-0.6
1,139,579	+		MPMX19_03700	0.58	-0.2
1,139,580	-		MPMX19_03700	0.58	-1.6
1,139,580	-		MPMX19_03700	0.58	-1.2
1,139,580	-		MPMX19_03700	0.58	-0.5
1,139,580	-		MPMX19_03700	0.58	+0.2
1,139,580	-		MPMX19_03700	0.58	+1.2
1,139,580	-		MPMX19_03700	0.58	-0.4
1,139,580	-		MPMX19_03700	0.58	-0.6
1,139,580	-		MPMX19_03700	0.58	+2.0
1,139,580	-		MPMX19_03700	0.58	+0.2
1,139,580	-		MPMX19_03700	0.58	-0.0
1,139,580	-		MPMX19_03700	0.58	+0.6
1,139,580	-		MPMX19_03700	0.58	-1.5
1,139,580	-		MPMX19_03700	0.58	-0.3
1,139,621	+		MPMX19_03700	0.62	-0.5
1,139,621	+		MPMX19_03700	0.62	+0.1
1,139,621	+		MPMX19_03700	0.62	+0.0
1,139,621	+		MPMX19_03700	0.62	-0.3
1,139,621	+		MPMX19_03700	0.62	+1.0
1,139,621	+		MPMX19_03700	0.62	+0.6
1,139,621	+		MPMX19_03700	0.62	+0.6
1,139,622	-		MPMX19_03700	0.62	-1.4
1,139,622	-		MPMX19_03700	0.62	+0.8
1,139,622	-		MPMX19_03700	0.62	-1.0