Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03639

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,073,662	+				-0.7
1,073,662	+				-0.5
1,073,714	+				-0.4
1,073,714	+				-0.2
1,073,715	-				+0.4
1,073,715	-				-1.2
1,073,715	-				-0.4
1,073,874	+		MPMX19_03638	0.26	-0.2
1,073,874	+		MPMX19_03638	0.26	-0.7
1,073,875	-		MPMX19_03638	0.26	-1.2
1,073,875	-		MPMX19_03638	0.26	-0.0
1,073,875	-		MPMX19_03638	0.26	-1.1
1,073,875	-		MPMX19_03638	0.26	+0.8
1,073,875	-		MPMX19_03638	0.26	-1.3
1,073,875	-		MPMX19_03638	0.26	+0.4
1,073,875	-		MPMX19_03638	0.26	-1.8
1,073,875	-		MPMX19_03638	0.26	+1.3
1,073,875	-		MPMX19_03638	0.26	+0.3
1,073,875	-		MPMX19_03638	0.26	-1.8
1,073,875	-		MPMX19_03638	0.26	+0.2
1,073,875	-		MPMX19_03638	0.26	-0.6
1,073,916	+		MPMX19_03638	0.32	-0.5
1,073,916	+		MPMX19_03638	0.32	-0.3
1,073,916	+		MPMX19_03638	0.32	+0.0
1,073,916	+		MPMX19_03638	0.32	-1.0
1,073,916	+		MPMX19_03638	0.32	-0.8
1,073,916	+		MPMX19_03638	0.32	-1.6
1,073,916	+		MPMX19_03638	0.32	-1.2
1,073,916	+		MPMX19_03638	0.32	-0.3
1,073,917	-		MPMX19_03638	0.32	-0.6
1,073,917	-		MPMX19_03638	0.32	-0.6
1,073,917	-		MPMX19_03638	0.32	-0.7
1,073,917	-		MPMX19_03638	0.32	-0.6
1,073,917	-		MPMX19_03638	0.32	-1.1
1,073,917	-		MPMX19_03638	0.32	-2.8
1,073,917	-		MPMX19_03638	0.32	-0.6
1,073,917	-		MPMX19_03638	0.32	-0.4
1,073,917	-		MPMX19_03638	0.32	+0.0
1,073,917	-		MPMX19_03638	0.32	-0.7
1,073,917	-		MPMX19_03638	0.32	-1.0
1,073,917	-		MPMX19_03638	0.32	-1.2
1,073,917	-		MPMX19_03638	0.32	-0.8
1,073,917	-		MPMX19_03638	0.32	-2.3
1,073,917	-		MPMX19_03638	0.32	+0.6
1,073,917	-		MPMX19_03638	0.32	+1.6
1,074,042	+		MPMX19_03638	0.49	-0.5
1,074,042	+		MPMX19_03638	0.49	-0.6
1,074,042	+		MPMX19_03638	0.49	-1.6
1,074,043	-		MPMX19_03638	0.50	-0.6
1,074,085	-		MPMX19_03638	0.55	-0.4
1,074,303	+		MPMX19_03638	0.86	-1.5
1,074,304	-		MPMX19_03638	0.86	-1.0
1,074,304	-		MPMX19_03638	0.86	-0.8
1,074,304	-		MPMX19_03638	0.86	-0.3
1,074,304	-		MPMX19_03638	0.86	-0.1
1,074,324	+		MPMX19_03638	0.89	-0.3
1,074,324	+		MPMX19_03638	0.89	-0.3
1,074,324	+		MPMX19_03638	0.89	-0.2
1,074,324	+		MPMX19_03638	0.89	-0.9
1,074,324	+		MPMX19_03638	0.89	-0.3
1,074,325	-		MPMX19_03638	0.89	-2.2
1,074,325	-		MPMX19_03638	0.89	-0.5
1,074,325	-		MPMX19_03638	0.89	+0.1
1,074,325	-		MPMX19_03638	0.89	-0.3
1,074,325	-		MPMX19_03638	0.89	+0.4
1,074,325	-		MPMX19_03638	0.89	+1.5
1,074,325	-		MPMX19_03638	0.89	+0.0
1,074,572	+		MPMX19_03639	0.24	-2.1
1,074,572	+		MPMX19_03639	0.24	-0.4
1,074,572	+		MPMX19_03639	0.24	-0.5
1,074,572	+		MPMX19_03639	0.24	+1.6
1,074,572	+		MPMX19_03639	0.24	+0.7
1,074,572	+		MPMX19_03639	0.24	+0.4
1,074,572	+		MPMX19_03639	0.24	+1.6
1,074,572	+		MPMX19_03639	0.24	-0.4
1,074,573	-		MPMX19_03639	0.24	+0.3
1,074,573	-		MPMX19_03639	0.24	-0.9
1,074,573	-		MPMX19_03639	0.24	-1.6
1,074,573	-		MPMX19_03639	0.24	+1.4
1,074,623	+		MPMX19_03639	0.31	+2.0
1,074,623	+		MPMX19_03639	0.31	+0.0
1,074,623	+		MPMX19_03639	0.31	-0.7
1,074,623	+		MPMX19_03639	0.31	-1.1
1,074,623	+		MPMX19_03639	0.31	-0.5
1,074,623	+		MPMX19_03639	0.31	-0.4
1,074,624	-		MPMX19_03639	0.31	-1.4
1,074,624	-		MPMX19_03639	0.31	+0.1
1,074,624	-		MPMX19_03639	0.31	+0.9
1,074,624	-		MPMX19_03639	0.31	+1.0
1,074,624	-		MPMX19_03639	0.31	-1.2
1,074,626	+		MPMX19_03639	0.32	-1.2
1,074,626	+		MPMX19_03639	0.32	-0.2
1,074,626	+		MPMX19_03639	0.32	-0.8
1,074,627	-		MPMX19_03639	0.32	+0.3
1,074,731	+		MPMX19_03639	0.47	-0.1
1,074,732	-		MPMX19_03639	0.47	-0.2
1,074,732	-		MPMX19_03639	0.47	+1.0
1,074,732	-		MPMX19_03639	0.47	-0.1
1,074,732	-		MPMX19_03639	0.47	-1.7
1,074,732	-		MPMX19_03639	0.47	-0.6
1,074,732	-		MPMX19_03639	0.47	+0.3
1,074,873	-		MPMX19_03639	0.68	+0.6
1,075,013	+		MPMX19_03639	0.88	-1.0
1,075,014	-		MPMX19_03639	0.88	+1.2
1,075,014	-		MPMX19_03639	0.88	-2.7
1,075,014	-		MPMX19_03639	0.88	+0.5
1,075,076	+				+2.0
1,075,076	+				-1.0
1,075,076	+				+0.2
1,075,076	+				-0.6
1,075,076	+				+0.8
1,075,077	-				+0.2
1,075,077	-				-1.0
1,075,077	-				+0.0
1,075,113	+				+0.0
1,075,113	+				-1.5
1,075,113	+				-0.1
1,075,113	+				-0.3
1,075,113	+				+0.0
1,075,113	+				-0.7
1,075,113	+				-0.4
1,075,114	-				+0.8
1,075,114	-				-0.4
1,075,114	-				-0.8
1,075,190	-				+0.0
1,075,224	+				-0.2
1,075,224	+				+0.8
1,075,224	+				+1.0
1,075,224	+				+2.3
1,075,225	-				-0.4
1,075,225	-				-2.4
1,075,225	-				+0.0
1,075,225	-				-0.4
1,075,225	-				-0.2
1,075,225	-				-0.6
1,075,225	-				-0.4
1,075,362	+		MPMX19_03640	0.26	+0.4
1,075,363	-		MPMX19_03640	0.26	+0.8
1,075,668	+		MPMX19_03640	0.65	-1.2
1,075,668	+		MPMX19_03640	0.65	-0.3
1,075,668	+		MPMX19_03640	0.65	-0.7
1,075,668	+		MPMX19_03640	0.65	-0.5
1,075,668	+		MPMX19_03640	0.65	-1.0
1,075,668	+		MPMX19_03640	0.65	-0.5
1,075,669	-		MPMX19_03640	0.65	-0.6
1,075,669	-		MPMX19_03640	0.65	-1.1
1,075,669	-		MPMX19_03640	0.65	-0.6
1,075,669	-		MPMX19_03640	0.65	-0.3
1,075,669	-		MPMX19_03640	0.65	-1.0
1,075,670	-		MPMX19_03640	0.65	-1.0
1,075,810	-		MPMX19_03640	0.82	+0.6
1,075,948	-				-1.2
1,075,948	-				+0.6
1,075,948	-				+0.0
1,075,966	-				-2.1
1,075,966	-				-1.2
1,075,987	+				-0.6