Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03596

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,022,219	+		MPMX19_03595	0.45	-0.6
1,022,219	+		MPMX19_03595	0.45	+1.3
1,022,219	+		MPMX19_03595	0.45	-0.5
1,022,219	+		MPMX19_03595	0.45	+0.9
1,022,219	+		MPMX19_03595	0.45	+0.3
1,022,219	+		MPMX19_03595	0.45	+1.5
1,022,219	+		MPMX19_03595	0.45	+0.6
1,022,219	+		MPMX19_03595	0.45	-1.1
1,022,220	-		MPMX19_03595	0.45	-1.5
1,022,220	-		MPMX19_03595	0.45	-0.2
1,022,220	-		MPMX19_03595	0.45	-0.3
1,022,220	-		MPMX19_03595	0.45	+0.6
1,022,220	-		MPMX19_03595	0.45	+1.0
1,022,303	+		MPMX19_03595	0.51	+0.8
1,022,303	+		MPMX19_03595	0.51	+1.4
1,022,303	+		MPMX19_03595	0.51	-0.4
1,022,304	-		MPMX19_03595	0.51	+1.3
1,022,304	-		MPMX19_03595	0.51	-0.4
1,022,327	+		MPMX19_03595	0.53	+0.5
1,022,327	+		MPMX19_03595	0.53	-0.1
1,022,327	+		MPMX19_03595	0.53	+0.6
1,022,327	+		MPMX19_03595	0.53	+0.6
1,022,328	-		MPMX19_03595	0.53	-0.5
1,022,328	-		MPMX19_03595	0.53	+0.8
1,022,328	-		MPMX19_03595	0.53	-0.6
1,022,328	-		MPMX19_03595	0.53	+0.8
1,022,328	-		MPMX19_03595	0.53	+0.4
1,022,328	-		MPMX19_03595	0.53	-0.5
1,022,328	-		MPMX19_03595	0.53	-0.1
1,022,328	-		MPMX19_03595	0.53	-1.0
1,022,328	-		MPMX19_03595	0.53	+1.9
1,022,328	-		MPMX19_03595	0.53	+0.8
1,022,328	-		MPMX19_03595	0.53	-0.2
1,022,328	-		MPMX19_03595	0.53	+1.0
1,022,328	-		MPMX19_03595	0.53	-0.7
1,022,540	+		MPMX19_03595	0.70	-0.2
1,022,541	-		MPMX19_03595	0.70	+0.2
1,022,541	-		MPMX19_03595	0.70	+1.3
1,022,570	+		MPMX19_03595	0.72	+0.1
1,022,570	+		MPMX19_03595	0.72	+0.5
1,022,570	+		MPMX19_03595	0.72	+0.0
1,022,571	-		MPMX19_03595	0.72	-1.0
1,022,571	-		MPMX19_03595	0.72	+0.1
1,022,571	-		MPMX19_03595	0.72	-0.1
1,022,606	+		MPMX19_03595	0.75	-1.1
1,022,606	+		MPMX19_03595	0.75	-0.0
1,022,606	+		MPMX19_03595	0.75	+0.9
1,022,606	+		MPMX19_03595	0.75	+0.2
1,022,607	-		MPMX19_03595	0.75	+1.2
1,022,607	-		MPMX19_03595	0.75	+1.2
1,022,998	+				+0.1
1,022,998	+				+0.6
1,022,998	+				-0.2
1,022,998	+				-0.2
1,022,998	+				-0.2
1,022,998	+				+0.6
1,022,998	+				-0.7
1,022,998	+				-0.6
1,022,998	+				+0.9
1,022,998	+				-0.6
1,022,998	+				-0.7
1,022,998	+				-0.7
1,022,999	-				-0.6
1,022,999	-				-0.4
1,022,999	-				-0.9
1,022,999	-				-0.7
1,022,999	-				+0.6
1,022,999	-				-0.3
1,023,200	+		MPMX19_03596	0.11	+0.4
1,023,200	+		MPMX19_03596	0.11	-0.4
1,023,200	+		MPMX19_03596	0.11	+0.8
1,023,201	-		MPMX19_03596	0.11	-1.3
1,023,201	-		MPMX19_03596	0.11	+0.4
1,023,201	-		MPMX19_03596	0.11	+0.8
1,023,233	+		MPMX19_03596	0.12	+0.4
1,023,233	+		MPMX19_03596	0.12	-1.1
1,023,233	+		MPMX19_03596	0.12	+1.6
1,023,233	+		MPMX19_03596	0.12	-1.0
1,023,233	+		MPMX19_03596	0.12	+1.2
1,023,233	+		MPMX19_03596	0.12	-0.1
1,023,233	+		MPMX19_03596	0.12	-0.4
1,023,233	+		MPMX19_03596	0.12	+0.0
1,023,233	+		MPMX19_03596	0.12	-2.1
1,023,233	+		MPMX19_03596	0.12	-0.9
1,023,233	+		MPMX19_03596	0.12	+0.8
1,023,234	-		MPMX19_03596	0.12	+0.2
1,023,234	-		MPMX19_03596	0.12	+0.5
1,023,234	-		MPMX19_03596	0.12	-0.6
1,023,234	-		MPMX19_03596	0.12	-0.6
1,023,234	-		MPMX19_03596	0.12	+0.6
1,023,234	-		MPMX19_03596	0.12	-0.2
1,023,234	-		MPMX19_03596	0.12	-0.6
1,023,234	-		MPMX19_03596	0.12	-0.1
1,023,234	-		MPMX19_03596	0.12	+1.3
1,023,234	-		MPMX19_03596	0.12	+1.6
1,023,234	-		MPMX19_03596	0.12	-0.8
1,023,234	-		MPMX19_03596	0.12	-0.2
1,023,234	-		MPMX19_03596	0.12	+0.0
1,023,234	-		MPMX19_03596	0.12	-1.6
1,023,234	-		MPMX19_03596	0.12	+0.9
1,023,234	-		MPMX19_03596	0.12	-1.6
1,023,234	-		MPMX19_03596	0.12	-0.4
1,023,234	-		MPMX19_03596	0.12	-0.3
1,023,239	+		MPMX19_03596	0.13	+0.6
1,023,239	+		MPMX19_03596	0.13	-0.6
1,023,240	-		MPMX19_03596	0.13	+0.3
1,023,240	-		MPMX19_03596	0.13	+0.0
1,023,240	-		MPMX19_03596	0.13	-0.7
1,023,240	-		MPMX19_03596	0.13	-0.3
1,023,365	+		MPMX19_03596	0.19	+0.2
1,023,365	+		MPMX19_03596	0.19	+0.0
1,023,365	+		MPMX19_03596	0.19	+1.3
1,023,365	+		MPMX19_03596	0.19	-2.6
1,023,365	+		MPMX19_03596	0.19	+0.1
1,023,365	+		MPMX19_03596	0.19	-0.1
1,023,365	+		MPMX19_03596	0.19	+1.6
1,023,365	+		MPMX19_03596	0.19	-0.4
1,023,365	+		MPMX19_03596	0.19	-0.2
1,023,365	+		MPMX19_03596	0.19	+0.0
1,023,365	+		MPMX19_03596	0.19	-0.4
1,023,365	+		MPMX19_03596	0.19	-0.6
1,023,365	+		MPMX19_03596	0.19	-1.4
1,023,366	-		MPMX19_03596	0.19	-0.3
1,023,366	-		MPMX19_03596	0.19	-0.1
1,023,366	-		MPMX19_03596	0.19	-0.3
1,023,366	-		MPMX19_03596	0.19	-0.1
1,023,366	-		MPMX19_03596	0.19	+0.2
1,023,447	-		MPMX19_03596	0.24	+0.0
1,023,456	-		MPMX19_03596	0.24	+0.6
1,023,456	-		MPMX19_03596	0.24	+0.8
1,023,527	+		MPMX19_03596	0.28	+0.0
1,023,528	-		MPMX19_03596	0.28	-1.4
1,023,528	-		MPMX19_03596	0.28	+0.3
1,023,530	+		MPMX19_03596	0.28	+0.2
1,023,530	+		MPMX19_03596	0.28	-0.4
1,023,530	+		MPMX19_03596	0.28	+2.3
1,023,530	+		MPMX19_03596	0.28	-1.9
1,023,530	+		MPMX19_03596	0.28	-1.7
1,023,530	+		MPMX19_03596	0.28	-0.4
1,023,530	+		MPMX19_03596	0.28	-0.7
1,023,530	+		MPMX19_03596	0.28	+0.3
1,023,530	+		MPMX19_03596	0.28	-0.6
1,023,530	+		MPMX19_03596	0.28	-0.4
1,023,530	+		MPMX19_03596	0.28	+0.3
1,023,530	+		MPMX19_03596	0.28	+0.7
1,023,530	+		MPMX19_03596	0.28	+3.2
1,023,531	-		MPMX19_03596	0.28	+1.2
1,023,531	-		MPMX19_03596	0.28	-0.2
1,023,531	-		MPMX19_03596	0.28	+0.4
1,023,531	-		MPMX19_03596	0.28	-0.3
1,023,531	-		MPMX19_03596	0.28	+0.0
1,023,531	-		MPMX19_03596	0.28	-0.2
1,023,531	-		MPMX19_03596	0.28	-0.6
1,023,531	-		MPMX19_03596	0.28	+0.7
1,023,531	-		MPMX19_03596	0.28	-0.1
1,023,531	-		MPMX19_03596	0.28	+0.5
1,023,752	+		MPMX19_03596	0.40	+0.7
1,023,752	+		MPMX19_03596	0.40	+1.5
1,023,752	+		MPMX19_03596	0.40	-0.9
1,023,752	+		MPMX19_03596	0.40	-1.6
1,023,752	+		MPMX19_03596	0.40	+0.4
1,023,752	+		MPMX19_03596	0.40	-0.7
1,023,753	-		MPMX19_03596	0.40	+0.8
1,023,753	-		MPMX19_03596	0.40	+0.1
1,023,753	-		MPMX19_03596	0.40	+0.0
1,023,753	-		MPMX19_03596	0.40	+0.9
1,023,753	-		MPMX19_03596	0.40	-0.0
1,023,753	-		MPMX19_03596	0.40	+0.6
1,023,753	-		MPMX19_03596	0.40	+0.0
1,023,753	-		MPMX19_03596	0.40	+0.5
1,023,753	-		MPMX19_03596	0.40	-1.0
1,023,753	-		MPMX19_03596	0.40	+0.4
1,023,753	-		MPMX19_03596	0.40	+0.2
1,023,753	-		MPMX19_03596	0.40	-0.1
1,024,428	+		MPMX19_03596	0.76	+0.2
1,024,428	+		MPMX19_03596	0.76	-0.7
1,024,429	-		MPMX19_03596	0.76	+0.5
1,024,816	+				-0.4
1,024,817	-				+0.3
1,025,203	+		MPMX19_03597	0.26	-0.6
1,025,203	+		MPMX19_03597	0.26	-0.2
1,025,204	-		MPMX19_03597	0.26	+0.0
1,025,204	-		MPMX19_03597	0.26	+0.8
1,025,204	-		MPMX19_03597	0.26	+1.4
1,025,204	-		MPMX19_03597	0.26	-0.2
1,025,204	-		MPMX19_03597	0.26	+0.6
1,025,204	-		MPMX19_03597	0.26	+0.3
1,025,782	+		MPMX19_03597	0.69	+1.0
1,025,782	+		MPMX19_03597	0.69	-1.0
1,025,782	+		MPMX19_03597	0.69	+0.1
1,025,782	+		MPMX19_03597	0.69	+0.1
1,025,782	+		MPMX19_03597	0.69	-0.2
1,025,783	-		MPMX19_03597	0.69	-0.4
1,025,783	-		MPMX19_03597	0.69	+0.0
1,025,783	-		MPMX19_03597	0.69	+0.2
1,025,783	-		MPMX19_03597	0.69	-1.2
1,025,783	-		MPMX19_03597	0.69	-0.8
1,025,783	-		MPMX19_03597	0.69	+0.4
1,025,783	-		MPMX19_03597	0.69	-0.2
1,025,786	-		MPMX19_03597	0.69	+0.5