Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02295

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,415,606	+		MPMX19_02294	0.61	-1.7
2,415,849	+		MPMX19_02294	0.71	+0.2
2,415,849	+		MPMX19_02294	0.71	-2.0
2,415,850	-		MPMX19_02294	0.71	-0.0
2,415,850	-		MPMX19_02294	0.71	+0.3
2,415,850	-		MPMX19_02294	0.71	-0.6
2,415,850	-		MPMX19_02294	0.71	-1.1
2,415,850	-		MPMX19_02294	0.71	-1.9
2,415,850	-		MPMX19_02294	0.71	-1.9
2,415,912	+		MPMX19_02294	0.74	-0.5
2,415,912	+		MPMX19_02294	0.74	-0.9
2,415,912	+		MPMX19_02294	0.74	-1.5
2,415,912	+		MPMX19_02294	0.74	-1.1
2,415,912	+		MPMX19_02294	0.74	-0.3
2,415,912	+		MPMX19_02294	0.74	-0.5
2,415,912	+		MPMX19_02294	0.74	-1.1
2,415,912	+		MPMX19_02294	0.74	-0.7
2,415,912	+		MPMX19_02294	0.74	-0.6
2,415,912	+		MPMX19_02294	0.74	-0.1
2,415,912	+		MPMX19_02294	0.74	-1.1
2,415,912	+		MPMX19_02294	0.74	-0.3
2,415,912	+		MPMX19_02294	0.74	-0.4
2,415,913	-		MPMX19_02294	0.74	+0.9
2,415,913	-		MPMX19_02294	0.74	+0.1
2,415,913	-		MPMX19_02294	0.74	-0.4
2,415,913	-		MPMX19_02294	0.74	-0.4
2,415,913	-		MPMX19_02294	0.74	-0.1
2,415,913	-		MPMX19_02294	0.74	+0.3
2,415,913	-		MPMX19_02294	0.74	-1.1
2,415,913	-		MPMX19_02294	0.74	-0.1
2,415,913	-		MPMX19_02294	0.74	-0.5
2,415,913	-		MPMX19_02294	0.74	-0.3
2,415,945	+		MPMX19_02294	0.75	-0.9
2,415,945	+		MPMX19_02294	0.75	+0.3
2,415,945	+		MPMX19_02294	0.75	-0.9
2,415,945	+		MPMX19_02294	0.75	+0.0
2,415,945	+		MPMX19_02294	0.75	+0.0
2,415,945	+		MPMX19_02294	0.75	-2.7
2,415,945	+		MPMX19_02294	0.75	-0.8
2,415,945	+		MPMX19_02294	0.75	-1.2
2,415,945	+		MPMX19_02294	0.75	-1.0
2,415,945	+		MPMX19_02294	0.75	-0.4
2,415,945	+		MPMX19_02294	0.75	-0.2
2,415,945	+		MPMX19_02294	0.75	-1.5
2,415,945	+		MPMX19_02294	0.75	-1.4
2,415,945	+		MPMX19_02294	0.75	-0.1
2,415,945	+		MPMX19_02294	0.75	+0.9
2,415,946	-		MPMX19_02294	0.75	+0.3
2,415,946	-		MPMX19_02294	0.75	-1.8
2,415,946	-		MPMX19_02294	0.75	-1.6
2,415,946	-		MPMX19_02294	0.75	+0.2
2,415,946	-		MPMX19_02294	0.75	+0.1
2,415,946	-		MPMX19_02294	0.75	+0.2
2,415,946	-		MPMX19_02294	0.75	-0.1
2,415,972	+		MPMX19_02294	0.76	-0.6
2,415,972	+		MPMX19_02294	0.76	-0.5
2,415,972	+		MPMX19_02294	0.76	-0.9
2,415,972	+		MPMX19_02294	0.76	-1.6
2,415,972	+		MPMX19_02294	0.76	-0.6
2,415,972	+		MPMX19_02294	0.76	+0.2
2,415,972	+		MPMX19_02294	0.76	+0.1
2,415,972	+		MPMX19_02294	0.76	-1.4
2,415,972	+		MPMX19_02294	0.76	+0.2
2,415,972	+		MPMX19_02294	0.76	-0.1
2,415,972	+		MPMX19_02294	0.76	-0.6
2,415,972	+		MPMX19_02294	0.76	-0.1
2,415,972	+		MPMX19_02294	0.76	-0.9
2,415,972	+		MPMX19_02294	0.76	-0.7
2,415,972	+		MPMX19_02294	0.76	-0.3
2,415,972	+		MPMX19_02294	0.76	+0.1
2,415,972	+		MPMX19_02294	0.76	+0.8
2,415,972	+		MPMX19_02294	0.76	-1.5
2,415,972	+		MPMX19_02294	0.76	-1.0
2,415,972	+		MPMX19_02294	0.76	-2.3
2,415,972	+		MPMX19_02294	0.76	-0.9
2,415,972	+		MPMX19_02294	0.76	-1.1
2,415,972	+		MPMX19_02294	0.76	-1.5
2,415,972	+		MPMX19_02294	0.76	-1.1
2,415,972	+		MPMX19_02294	0.76	-0.5
2,415,972	+		MPMX19_02294	0.76	-2.2
2,415,972	+		MPMX19_02294	0.76	-1.6
2,415,972	+		MPMX19_02294	0.76	-0.4
2,415,972	+		MPMX19_02294	0.76	-0.2
2,415,973	-		MPMX19_02294	0.76	+1.3
2,415,973	-		MPMX19_02294	0.76	-0.1
2,415,973	-		MPMX19_02294	0.76	-1.3
2,415,973	-		MPMX19_02294	0.76	-0.7
2,415,973	-		MPMX19_02294	0.76	-1.9
2,415,973	-		MPMX19_02294	0.76	-0.4
2,415,973	-		MPMX19_02294	0.76	+1.5
2,415,973	-		MPMX19_02294	0.76	-0.3
2,415,973	-		MPMX19_02294	0.76	-1.3
2,415,973	-		MPMX19_02294	0.76	+1.0
2,415,973	-		MPMX19_02294	0.76	+0.7
2,415,973	-		MPMX19_02294	0.76	+0.2
2,415,973	-		MPMX19_02294	0.76	-0.3
2,415,973	-		MPMX19_02294	0.76	-1.2
2,415,973	-		MPMX19_02294	0.76	-0.5
2,416,023	+		MPMX19_02294	0.78	-0.2
2,416,023	+		MPMX19_02294	0.78	+0.5
2,416,023	+		MPMX19_02294	0.78	+0.6
2,416,023	+		MPMX19_02294	0.78	-0.3
2,416,023	+		MPMX19_02294	0.78	+0.4
2,416,023	+		MPMX19_02294	0.78	-1.3
2,416,023	+		MPMX19_02294	0.78	+0.4
2,416,023	+		MPMX19_02294	0.78	+0.2
2,416,023	+		MPMX19_02294	0.78	-2.6
2,416,024	-		MPMX19_02294	0.78	-1.5
2,416,024	-		MPMX19_02294	0.78	+1.0
2,416,024	-		MPMX19_02294	0.78	-1.5
2,416,024	-		MPMX19_02294	0.78	-2.3
2,416,024	-		MPMX19_02294	0.78	-1.5
2,416,083	+		MPMX19_02294	0.80	-0.7
2,416,104	+		MPMX19_02294	0.81	-0.4
2,416,104	+		MPMX19_02294	0.81	-0.9
2,416,104	+		MPMX19_02294	0.81	+1.5
2,416,104	+		MPMX19_02294	0.81	-0.3
2,416,104	+		MPMX19_02294	0.81	-0.1
2,416,104	+		MPMX19_02294	0.81	+0.5
2,416,104	+		MPMX19_02294	0.81	+0.3
2,416,104	+		MPMX19_02294	0.81	-0.4
2,416,105	-		MPMX19_02294	0.81	-0.5
2,416,105	-		MPMX19_02294	0.81	+0.0
2,416,105	-		MPMX19_02294	0.81	-0.1
2,416,105	-		MPMX19_02294	0.81	+0.4
2,416,105	-		MPMX19_02294	0.81	-0.3
2,416,105	-		MPMX19_02294	0.81	+0.7
2,416,105	-		MPMX19_02294	0.81	+0.2
2,416,105	-		MPMX19_02294	0.81	-0.7
2,416,105	-		MPMX19_02294	0.81	-1.1
2,416,105	-		MPMX19_02294	0.81	-1.4
2,416,105	-		MPMX19_02294	0.81	+0.4
2,416,105	-		MPMX19_02294	0.81	-0.2
2,416,105	-		MPMX19_02294	0.81	+0.2
2,416,134	+		MPMX19_02294	0.82	+0.5
2,416,134	+		MPMX19_02294	0.82	+0.7
2,416,134	+		MPMX19_02294	0.82	-1.9
2,416,134	+		MPMX19_02294	0.82	-0.8
2,416,134	+		MPMX19_02294	0.82	+0.1
2,416,134	+		MPMX19_02294	0.82	-0.9
2,416,134	+		MPMX19_02294	0.82	+0.2
2,416,135	-		MPMX19_02294	0.83	-0.3
2,416,176	+		MPMX19_02294	0.84	-0.7
2,416,176	+		MPMX19_02294	0.84	+0.1
2,416,209	+		MPMX19_02294	0.85	-0.2
2,416,209	+		MPMX19_02294	0.85	+0.5
2,416,209	+		MPMX19_02294	0.85	-1.0
2,416,209	+		MPMX19_02294	0.85	-1.1
2,416,209	+		MPMX19_02294	0.85	-1.8
2,416,209	+		MPMX19_02294	0.85	-1.1
2,416,210	-		MPMX19_02294	0.86	-0.3
2,416,210	-		MPMX19_02294	0.86	+0.5
2,416,210	-		MPMX19_02294	0.86	-0.9
2,416,210	-		MPMX19_02294	0.86	-0.8
2,416,210	-		MPMX19_02294	0.86	+0.3
2,416,527	+				-1.1
2,416,527	+				-1.0
2,416,527	+				-1.6
2,416,527	+				-0.9
2,416,527	+				-1.5
2,416,527	+				+0.1
2,416,528	-				+0.1
2,416,528	-				-0.2
2,416,528	-				-0.6
2,416,528	-				-1.7
2,416,817	+		MPMX19_02295	0.44	-0.3
2,416,817	+		MPMX19_02295	0.44	-1.6
2,416,817	+		MPMX19_02295	0.44	+0.8
2,416,817	+		MPMX19_02295	0.44	+1.5
2,416,817	+		MPMX19_02295	0.44	-0.1
2,416,817	+		MPMX19_02295	0.44	+0.5
2,416,817	+		MPMX19_02295	0.44	-0.6
2,416,817	+		MPMX19_02295	0.44	+0.3
2,416,817	+		MPMX19_02295	0.44	-0.2
2,416,817	+		MPMX19_02295	0.44	-0.3
2,416,817	+		MPMX19_02295	0.44	-1.1
2,416,817	+		MPMX19_02295	0.44	-1.1
2,416,817	+		MPMX19_02295	0.44	+0.4
2,416,818	-		MPMX19_02295	0.44	-1.0
2,416,818	-		MPMX19_02295	0.44	+0.3
2,416,818	-		MPMX19_02295	0.44	-0.9
2,416,818	-		MPMX19_02295	0.44	-0.7
2,416,818	-		MPMX19_02295	0.44	+0.9
2,416,818	-		MPMX19_02295	0.44	+0.7
2,416,818	-		MPMX19_02295	0.44	-1.0
2,416,859	+		MPMX19_02295	0.52	-0.3
2,416,859	+		MPMX19_02295	0.52	-0.3
2,416,860	-		MPMX19_02295	0.52	+1.1
2,416,860	-		MPMX19_02295	0.52	-1.7
2,416,860	-		MPMX19_02295	0.52	+0.1
2,417,000	+		MPMX19_02295	0.79	-0.1
2,417,000	+		MPMX19_02295	0.79	-0.3
2,417,001	-		MPMX19_02295	0.79	-1.6
2,417,001	-		MPMX19_02295	0.79	+1.4
2,417,001	-		MPMX19_02295	0.79	-1.1
2,417,001	-		MPMX19_02295	0.79	-1.2
2,417,001	-		MPMX19_02295	0.79	+0.7
2,417,001	-		MPMX19_02295	0.79	-0.5
2,417,169	-		MPMX19_02296	0.10	+0.2
2,417,300	-		MPMX19_02296	0.31	-1.3
2,417,300	-		MPMX19_02296	0.31	+0.1
2,417,300	-		MPMX19_02296	0.31	-0.7
2,417,300	-		MPMX19_02296	0.31	+0.7
2,417,300	-		MPMX19_02296	0.31	-0.9
2,417,300	-		MPMX19_02296	0.31	-2.1
2,417,611	+		MPMX19_02296	0.82	-1.3
2,417,611	+		MPMX19_02296	0.82	+0.2
2,417,611	+		MPMX19_02296	0.82	-0.8
2,417,611	+		MPMX19_02296	0.82	-0.3
2,417,611	+		MPMX19_02296	0.82	-0.4
2,417,611	+		MPMX19_02296	0.82	-0.5
2,417,611	+		MPMX19_02296	0.82	-1.5
2,417,611	+		MPMX19_02296	0.82	-0.6
2,417,611	+		MPMX19_02296	0.82	+0.7
2,417,611	+		MPMX19_02296	0.82	-0.3
2,417,611	+		MPMX19_02296	0.82	-2.6
2,417,611	+		MPMX19_02296	0.82	-0.1
2,417,611	+		MPMX19_02296	0.82	+0.4
2,417,611	+		MPMX19_02296	0.82	-0.9
2,417,611	+		MPMX19_02296	0.82	-0.2
2,417,611	+		MPMX19_02296	0.82	-0.6
2,417,611	+		MPMX19_02296	0.82	-0.5
2,417,611	+		MPMX19_02296	0.82	-0.6
2,417,612	-		MPMX19_02296	0.82	-0.2
2,417,612	-		MPMX19_02296	0.82	+0.1
2,417,612	-		MPMX19_02296	0.82	+0.3
2,417,612	-		MPMX19_02296	0.82	-0.7
2,417,612	-		MPMX19_02296	0.82	-0.2
2,417,612	-		MPMX19_02296	0.82	-0.8
2,417,612	-		MPMX19_02296	0.82	-0.6
2,417,612	-		MPMX19_02296	0.82	-1.6
2,417,612	-		MPMX19_02296	0.82	+0.6
2,417,612	-		MPMX19_02296	0.82	-0.7
2,417,612	-		MPMX19_02296	0.82	-0.5
2,417,722	+				+0.2
2,417,722	+				-1.1
2,417,722	+				-1.2
2,417,722	+				+0.1
2,417,722	+				+0.4
2,417,722	+				-1.0
2,417,722	+				-0.4
2,417,722	+				+0.1
2,417,722	+				-1.2
2,417,722	+				-0.6
2,417,723	-				-2.3
2,417,723	-				-0.6
2,417,723	-				+0.7
2,417,723	-				-0.9
2,417,723	-				+0.1
2,417,723	-				-0.2
2,417,723	-				-0.0
2,417,723	-				-0.6
2,417,723	-				-1.5
2,418,026	+		MPMX19_02297	0.59	-1.8
2,418,026	+		MPMX19_02297	0.59	+1.2
2,418,026	+		MPMX19_02297	0.59	-1.3
2,418,026	+		MPMX19_02297	0.59	-0.2
2,418,026	+		MPMX19_02297	0.59	+1.1
2,418,027	-		MPMX19_02297	0.60	-0.2
2,418,027	-		MPMX19_02297	0.60	-0.0
2,418,027	-		MPMX19_02297	0.60	+0.6
2,418,027	-		MPMX19_02297	0.60	-2.0
2,418,027	-		MPMX19_02297	0.60	-0.3
2,418,027	-		MPMX19_02297	0.60	-0.7
2,418,027	-		MPMX19_02297	0.60	+0.1
2,418,071	+		MPMX19_02297	0.71	-0.6
2,418,071	+		MPMX19_02297	0.71	-0.1
2,418,071	+		MPMX19_02297	0.71	-0.5
2,418,071	+		MPMX19_02297	0.71	-0.7
2,418,071	+		MPMX19_02297	0.71	-1.9
2,418,071	+		MPMX19_02297	0.71	-0.7
2,418,072	-		MPMX19_02297	0.72	-1.3
2,418,072	-		MPMX19_02297	0.72	-0.8
2,418,072	-		MPMX19_02297	0.72	-1.1
2,418,072	-		MPMX19_02297	0.72	-1.2
2,418,072	-		MPMX19_02297	0.72	-0.5
2,418,072	-		MPMX19_02297	0.72	+0.2
2,418,072	-		MPMX19_02297	0.72	-0.7