Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01607

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,684,474	+		MPMX19_01606	0.76	-0.1
1,684,474	+		MPMX19_01606	0.76	+0.2
1,684,474	+		MPMX19_01606	0.76	-0.1
1,684,474	+		MPMX19_01606	0.76	-1.3
1,684,474	+		MPMX19_01606	0.76	+0.7
1,684,474	+		MPMX19_01606	0.76	+0.2
1,684,474	+		MPMX19_01606	0.76	-0.1
1,684,474	+		MPMX19_01606	0.76	-0.1
1,684,474	+		MPMX19_01606	0.76	-1.8
1,684,474	+		MPMX19_01606	0.76	-0.8
1,684,475	-		MPMX19_01606	0.76	-2.6
1,684,475	-		MPMX19_01606	0.76	-0.6
1,684,475	-		MPMX19_01606	0.76	-0.8
1,684,475	-		MPMX19_01606	0.76	-1.2
1,684,475	-		MPMX19_01606	0.76	-0.5
1,684,480	+		MPMX19_01606	0.76	-1.6
1,684,480	+		MPMX19_01606	0.76	-0.1
1,684,480	+		MPMX19_01606	0.76	-0.1
1,684,480	+		MPMX19_01606	0.76	-0.6
1,684,480	+		MPMX19_01606	0.76	+0.1
1,684,480	+		MPMX19_01606	0.76	-1.9
1,684,480	+		MPMX19_01606	0.76	-0.7
1,684,480	+		MPMX19_01606	0.76	-0.6
1,684,480	+		MPMX19_01606	0.76	-1.1
1,684,480	+		MPMX19_01606	0.76	-0.9
1,684,480	+		MPMX19_01606	0.76	-1.6
1,684,480	+		MPMX19_01606	0.76	-0.1
1,684,481	-		MPMX19_01606	0.76	-1.2
1,684,481	-		MPMX19_01606	0.76	-0.3
1,684,481	-		MPMX19_01606	0.76	-1.5
1,684,481	-		MPMX19_01606	0.76	-2.3
1,684,481	-		MPMX19_01606	0.76	+0.1
1,684,519	+		MPMX19_01606	0.78	-3.5
1,684,519	+		MPMX19_01606	0.78	-0.3
1,684,519	+		MPMX19_01606	0.78	-1.4
1,684,520	-		MPMX19_01606	0.78	+0.3
1,684,520	-		MPMX19_01606	0.78	-1.1
1,684,520	-		MPMX19_01606	0.78	-0.7
1,684,627	+		MPMX19_01606	0.83	+0.3
1,684,627	+		MPMX19_01606	0.83	+0.3
1,684,627	+		MPMX19_01606	0.83	-1.6
1,684,627	+		MPMX19_01606	0.83	-1.5
1,684,627	+		MPMX19_01606	0.83	+0.0
1,684,627	+		MPMX19_01606	0.83	-0.7
1,684,627	+		MPMX19_01606	0.83	-1.1
1,684,627	+		MPMX19_01606	0.83	+0.8
1,684,627	+		MPMX19_01606	0.83	-0.1
1,684,627	+		MPMX19_01606	0.83	-1.5
1,684,627	+		MPMX19_01606	0.83	-0.1
1,684,627	+		MPMX19_01606	0.83	+1.5
1,684,627	+		MPMX19_01606	0.83	-1.2
1,684,627	+		MPMX19_01606	0.83	+0.1
1,684,627	+		MPMX19_01606	0.83	-1.0
1,684,627	+		MPMX19_01606	0.83	-1.2
1,684,627	+		MPMX19_01606	0.83	-0.1
1,684,628	-		MPMX19_01606	0.83	-0.1
1,684,628	-		MPMX19_01606	0.83	+0.5
1,684,628	-		MPMX19_01606	0.83	-1.6
1,684,628	-		MPMX19_01606	0.83	+0.7
1,684,628	-		MPMX19_01606	0.83	-1.8
1,684,628	-		MPMX19_01606	0.83	-1.0
1,684,628	-		MPMX19_01606	0.83	-1.1
1,684,628	-		MPMX19_01606	0.83	-0.8
1,684,628	-		MPMX19_01606	0.83	-0.5
1,684,628	-		MPMX19_01606	0.83	-1.9
1,684,628	-		MPMX19_01606	0.83	+0.2
1,684,628	-		MPMX19_01606	0.83	+0.2
1,684,628	-		MPMX19_01606	0.83	+0.5
1,684,628	-		MPMX19_01606	0.83	-0.6
1,684,628	-		MPMX19_01606	0.83	-0.5
1,684,628	-		MPMX19_01606	0.83	-1.6
1,684,628	-		MPMX19_01606	0.83	-1.3
1,684,628	-		MPMX19_01606	0.83	-0.3
1,684,628	-		MPMX19_01606	0.83	-0.6
1,684,628	-		MPMX19_01606	0.83	-0.2
1,684,628	-		MPMX19_01606	0.83	-2.0
1,684,628	-		MPMX19_01606	0.83	+0.1
1,684,628	-		MPMX19_01606	0.83	-0.1
1,684,628	-		MPMX19_01606	0.83	-1.0
1,684,945	+				-0.3
1,684,945	+				+0.5
1,684,946	-				-1.5
1,685,015	+				+0.4
1,685,015	+				+0.3
1,685,015	+				-1.9
1,685,015	+				-0.6
1,685,016	-				+0.9
1,685,016	-				-0.8
1,685,016	-				+0.5
1,685,056	+				-0.5
1,685,056	+				-1.1
1,685,057	-				-1.6
1,685,057	-				-1.5
1,685,057	-				-0.7
1,685,057	-				+0.1
1,685,057	-				+0.3
1,685,057	-				+0.3
1,685,057	-				-1.3
1,685,281	-		MPMX19_01607	0.32	-1.5
1,685,281	-		MPMX19_01607	0.32	-0.3
1,685,355	+		MPMX19_01607	0.47	-1.2
1,685,355	+		MPMX19_01607	0.47	+0.3
1,685,355	+		MPMX19_01607	0.47	-0.7
1,685,355	+		MPMX19_01607	0.47	-1.5
1,685,355	+		MPMX19_01607	0.47	+0.8
1,685,355	+		MPMX19_01607	0.47	-0.1
1,685,355	+		MPMX19_01607	0.47	+1.1
1,685,355	+		MPMX19_01607	0.47	+0.0
1,685,356	-		MPMX19_01607	0.48	-1.5
1,685,356	-		MPMX19_01607	0.48	-0.8
1,685,356	-		MPMX19_01607	0.48	-0.4
1,685,364	+		MPMX19_01607	0.49	-1.9
1,685,364	+		MPMX19_01607	0.49	-0.5
1,685,364	+		MPMX19_01607	0.49	-1.8
1,685,365	-		MPMX19_01607	0.49	-0.1
1,685,365	-		MPMX19_01607	0.49	-0.8
1,685,365	-		MPMX19_01607	0.49	-1.6
1,685,365	-		MPMX19_01607	0.49	-1.5
1,685,365	-		MPMX19_01607	0.49	-0.4
1,685,365	-		MPMX19_01607	0.49	-0.5
1,685,365	-		MPMX19_01607	0.49	-1.4
1,685,365	-		MPMX19_01607	0.49	+0.2
1,685,365	-		MPMX19_01607	0.49	-1.1
1,685,684	+				-0.3
1,685,685	-				-0.1
1,685,685	-				-0.3
1,685,685	-				-0.1
1,685,685	-				-0.2
1,685,701	-				+0.3
1,685,826	+		MPMX19_01608	0.14	-1.9
1,685,826	+		MPMX19_01608	0.14	+0.5
1,685,826	+		MPMX19_01608	0.14	+1.4
1,685,826	+		MPMX19_01608	0.14	-0.7
1,685,826	+		MPMX19_01608	0.14	+0.2
1,685,827	-		MPMX19_01608	0.14	-0.1
1,685,827	-		MPMX19_01608	0.14	-0.2
1,685,827	-		MPMX19_01608	0.14	-1.8
1,685,910	+		MPMX19_01608	0.24	-1.1
1,685,910	+		MPMX19_01608	0.24	+0.9
1,685,910	+		MPMX19_01608	0.24	-1.0
1,685,910	+		MPMX19_01608	0.24	-0.1
1,685,910	+		MPMX19_01608	0.24	-0.7
1,685,910	+		MPMX19_01608	0.24	+0.1
1,685,910	+		MPMX19_01608	0.24	-0.5
1,685,910	+		MPMX19_01608	0.24	-0.3
1,685,910	+		MPMX19_01608	0.24	-0.8
1,685,911	-		MPMX19_01608	0.24	-0.7
1,685,911	-		MPMX19_01608	0.24	-1.5
1,685,911	-		MPMX19_01608	0.24	-2.1
1,685,911	-		MPMX19_01608	0.24	+0.3
1,685,911	-		MPMX19_01608	0.24	-0.2
1,685,911	-		MPMX19_01608	0.24	+0.1
1,685,911	-		MPMX19_01608	0.24	-1.6
1,685,911	-		MPMX19_01608	0.24	-0.8
1,685,911	-		MPMX19_01608	0.24	+0.5
1,685,911	-		MPMX19_01608	0.24	-0.3
1,685,911	-		MPMX19_01608	0.24	+0.5
1,685,911	-		MPMX19_01608	0.24	+1.8
1,685,943	+		MPMX19_01608	0.27	-0.6
1,685,943	+		MPMX19_01608	0.27	-2.6
1,685,944	-		MPMX19_01608	0.27	-1.1
1,685,944	-		MPMX19_01608	0.27	+0.1
1,686,318	+		MPMX19_01608	0.69	+0.1
1,686,318	+		MPMX19_01608	0.69	-0.1
1,686,318	+		MPMX19_01608	0.69	-1.1
1,686,318	+		MPMX19_01608	0.69	+0.1
1,686,318	+		MPMX19_01608	0.69	-1.8
1,686,318	+		MPMX19_01608	0.69	-0.7
1,686,318	+		MPMX19_01608	0.69	+0.1
1,686,318	+		MPMX19_01608	0.69	+0.3
1,686,318	+		MPMX19_01608	0.69	-0.4
1,686,318	+		MPMX19_01608	0.69	-0.1
1,686,318	+		MPMX19_01608	0.69	-0.1
1,686,318	+		MPMX19_01608	0.69	+0.2
1,686,318	+		MPMX19_01608	0.69	-0.1
1,686,318	+		MPMX19_01608	0.69	-0.5
1,686,318	+		MPMX19_01608	0.69	-1.3
1,686,318	+		MPMX19_01608	0.69	-1.6
1,686,318	+		MPMX19_01608	0.69	+0.3
1,686,319	-		MPMX19_01608	0.70	-0.6
1,686,319	-		MPMX19_01608	0.70	-0.5
1,686,319	-		MPMX19_01608	0.70	-1.1
1,686,319	-		MPMX19_01608	0.70	-1.0
1,686,319	-		MPMX19_01608	0.70	+1.4
1,686,319	-		MPMX19_01608	0.70	-0.4
1,686,319	-		MPMX19_01608	0.70	+0.3
1,686,319	-		MPMX19_01608	0.70	+0.7
1,686,319	-		MPMX19_01608	0.70	-1.4
1,686,319	-		MPMX19_01608	0.70	-1.4
1,686,319	-		MPMX19_01608	0.70	-0.3
1,686,319	-		MPMX19_01608	0.70	+0.4
1,686,319	-		MPMX19_01608	0.70	-0.1
1,686,319	-		MPMX19_01608	0.70	+0.3
1,686,319	-		MPMX19_01608	0.70	+0.7
1,686,319	-		MPMX19_01608	0.70	+0.5
1,686,319	-		MPMX19_01608	0.70	-0.5
1,686,319	-		MPMX19_01608	0.70	-0.5
1,686,319	-		MPMX19_01608	0.70	-1.3
1,686,319	-		MPMX19_01608	0.70	+0.1
1,686,319	-		MPMX19_01608	0.70	-1.9
1,686,319	-		MPMX19_01608	0.70	+0.3
1,686,319	-		MPMX19_01608	0.70	-1.0
1,686,441	+		MPMX19_01608	0.83	-0.6
1,686,441	+		MPMX19_01608	0.83	-0.4
1,686,441	+		MPMX19_01608	0.83	-0.1
1,686,441	+		MPMX19_01608	0.83	-0.3
1,686,442	-		MPMX19_01608	0.83	-0.3
1,686,442	-		MPMX19_01608	0.83	-0.1
1,686,442	-		MPMX19_01608	0.83	+0.0
1,686,442	-		MPMX19_01608	0.83	-0.1
1,686,442	-		MPMX19_01608	0.83	-0.5