Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01593

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,666,003	+		MPMX19_01591	0.65	+1.5
1,666,003	+		MPMX19_01591	0.65	+0.2
1,666,003	+		MPMX19_01591	0.65	+0.4
1,666,153	+		MPMX19_01591	0.78	-0.1
1,666,153	+		MPMX19_01591	0.78	-1.3
1,666,153	+		MPMX19_01591	0.78	-0.1
1,666,153	+		MPMX19_01591	0.78	+1.5
1,666,153	+		MPMX19_01591	0.78	+0.4
1,666,153	+		MPMX19_01591	0.78	-1.6
1,666,153	+		MPMX19_01591	0.78	+0.1
1,666,153	+		MPMX19_01591	0.78	+0.5
1,666,153	+		MPMX19_01591	0.78	-0.4
1,666,153	+		MPMX19_01591	0.78	+0.9
1,666,153	+		MPMX19_01591	0.78	-1.9
1,666,154	-		MPMX19_01591	0.78	+0.5
1,666,154	-		MPMX19_01591	0.78	+0.7
1,666,154	-		MPMX19_01591	0.78	-1.7
1,666,154	-		MPMX19_01591	0.78	-0.1
1,666,154	-		MPMX19_01591	0.78	-0.3
1,666,154	-		MPMX19_01591	0.78	-0.5
1,666,154	-		MPMX19_01591	0.78	-0.8
1,666,154	-		MPMX19_01591	0.78	+0.2
1,666,154	-		MPMX19_01591	0.78	+0.1
1,666,154	-		MPMX19_01591	0.78	+0.3
1,666,154	-		MPMX19_01591	0.78	-1.3
1,666,303	+				-1.1
1,666,303	+				-0.1
1,666,304	-				-0.3
1,666,304	-				+0.6
1,666,453	+				-0.3
1,666,453	+				-1.5
1,666,453	+				+0.3
1,666,453	+				-1.3
1,666,453	+				-1.3
1,666,454	-				+0.5
1,667,236	-		MPMX19_01593	0.16	+0.2
1,667,236	-		MPMX19_01593	0.16	-0.1
1,667,236	-		MPMX19_01593	0.16	-1.9
1,667,236	-		MPMX19_01593	0.16	-1.2
1,667,236	-		MPMX19_01593	0.16	-1.3
1,667,236	-		MPMX19_01593	0.16	+0.5
1,667,236	-		MPMX19_01593	0.16	-0.8
1,667,236	-		MPMX19_01593	0.16	-0.5
1,667,236	-		MPMX19_01593	0.16	-0.6
1,667,406	+		MPMX19_01593	0.27	-0.5
1,667,407	-		MPMX19_01593	0.27	+0.1
1,667,407	-		MPMX19_01593	0.27	-0.5
1,667,407	-		MPMX19_01593	0.27	-0.5
1,667,407	-		MPMX19_01593	0.27	-0.1
1,667,407	-		MPMX19_01593	0.27	-2.1
1,667,407	-		MPMX19_01593	0.27	-0.9
1,667,407	-		MPMX19_01593	0.27	+0.9
1,667,407	-		MPMX19_01593	0.27	-1.0
1,667,407	-		MPMX19_01593	0.27	-1.3
1,667,407	-		MPMX19_01593	0.27	-1.9
1,667,422	-		MPMX19_01593	0.28	-0.8
1,667,422	-		MPMX19_01593	0.28	+0.7
1,667,422	-		MPMX19_01593	0.28	-1.9
1,667,501	-		MPMX19_01593	0.33	+0.4
1,667,501	-		MPMX19_01593	0.33	+0.1
1,667,501	-		MPMX19_01593	0.33	-0.6
1,667,602	-		MPMX19_01593	0.40	-0.8
1,667,602	-		MPMX19_01593	0.40	-0.5
1,667,602	-		MPMX19_01593	0.40	+0.2
1,667,602	-		MPMX19_01593	0.40	-0.5
1,667,602	-		MPMX19_01593	0.40	-0.2
1,667,602	-		MPMX19_01593	0.40	-0.5
1,667,602	-		MPMX19_01593	0.40	-1.5
1,667,602	-		MPMX19_01593	0.40	-0.6
1,667,602	-		MPMX19_01593	0.40	-1.9
1,667,602	-		MPMX19_01593	0.40	-0.5
1,667,602	-		MPMX19_01593	0.40	-1.3
1,667,602	-		MPMX19_01593	0.40	-1.1
1,667,602	-		MPMX19_01593	0.40	-2.1
1,667,602	-		MPMX19_01593	0.40	-0.5
1,667,602	-		MPMX19_01593	0.40	-0.3
1,667,602	-		MPMX19_01593	0.40	+0.3
1,667,602	-		MPMX19_01593	0.40	-1.1
1,667,602	-		MPMX19_01593	0.40	-1.3
1,667,602	-		MPMX19_01593	0.40	-0.6
1,667,602	-		MPMX19_01593	0.40	-1.1
1,667,914	-		MPMX19_01593	0.61	-1.3
1,667,914	-		MPMX19_01593	0.61	-0.7
1,667,914	-		MPMX19_01593	0.61	+0.8
1,667,914	-		MPMX19_01593	0.61	-2.3
1,667,914	-		MPMX19_01593	0.61	-1.9
1,668,088	-		MPMX19_01593	0.72	-2.4
1,668,088	-		MPMX19_01593	0.72	+0.5
1,668,088	-		MPMX19_01593	0.72	-1.6
1,668,088	-		MPMX19_01593	0.72	-0.5
1,668,088	-		MPMX19_01593	0.72	+0.3
1,668,103	-		MPMX19_01593	0.73	-0.1
1,668,103	-		MPMX19_01593	0.73	-0.8
1,668,103	-		MPMX19_01593	0.73	-0.1
1,668,564	-				-0.6
1,668,564	-				-0.3
1,668,564	-				-1.1
1,668,564	-				+0.5
1,668,564	-				-1.9
1,668,564	-				+0.2
1,668,564	-				+0.2
1,668,564	-				+0.5
1,668,564	-				-1.1
1,668,564	-				-0.9
1,668,795	+		MPMX19_01594	0.11	-0.1
1,668,795	+		MPMX19_01594	0.11	+0.2
1,668,795	+		MPMX19_01594	0.11	+0.1
1,668,795	+		MPMX19_01594	0.11	+1.5
1,668,796	-		MPMX19_01594	0.11	-1.6
1,668,796	-		MPMX19_01594	0.11	-2.3
1,668,796	-		MPMX19_01594	0.11	-1.1
1,668,796	-		MPMX19_01594	0.11	-1.3
1,668,796	-		MPMX19_01594	0.11	-0.6
1,668,796	-		MPMX19_01594	0.11	-0.6
1,668,798	-		MPMX19_01594	0.12	-1.1
1,668,939	+		MPMX19_01594	0.22	-0.9
1,668,939	+		MPMX19_01594	0.22	+0.0
1,668,939	+		MPMX19_01594	0.22	-1.8
1,668,939	+		MPMX19_01594	0.22	+0.3
1,668,939	+		MPMX19_01594	0.22	-0.3
1,668,939	+		MPMX19_01594	0.22	-0.3
1,668,939	+		MPMX19_01594	0.22	+0.2
1,668,939	+		MPMX19_01594	0.22	+0.0
1,668,939	+		MPMX19_01594	0.22	-2.0
1,668,939	+		MPMX19_01594	0.22	-0.4
1,668,939	+		MPMX19_01594	0.22	-0.2
1,668,939	+		MPMX19_01594	0.22	-0.5
1,668,939	+		MPMX19_01594	0.22	+0.7
1,668,939	+		MPMX19_01594	0.22	+1.1
1,668,939	+		MPMX19_01594	0.22	+0.2
1,668,939	+		MPMX19_01594	0.22	-0.6
1,668,939	+		MPMX19_01594	0.22	-0.1
1,668,939	+		MPMX19_01594	0.22	-0.2
1,668,939	+		MPMX19_01594	0.22	+0.8
1,668,939	+		MPMX19_01594	0.22	-1.0
1,668,939	+		MPMX19_01594	0.22	-0.5
1,668,939	+		MPMX19_01594	0.22	-1.1
1,668,940	-		MPMX19_01594	0.22	-0.4
1,668,940	-		MPMX19_01594	0.22	-0.7
1,668,940	-		MPMX19_01594	0.22	-2.1
1,668,940	-		MPMX19_01594	0.22	-0.1
1,668,940	-		MPMX19_01594	0.22	-0.4
1,668,940	-		MPMX19_01594	0.22	+1.5
1,668,940	-		MPMX19_01594	0.22	-1.1
1,668,940	-		MPMX19_01594	0.22	-0.9
1,668,940	-		MPMX19_01594	0.22	-0.2
1,669,394	-		MPMX19_01594	0.54	-1.3
1,669,394	-		MPMX19_01594	0.54	-1.1