Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01261

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,312,928	-		MPMX19_01260	0.81	+0.2
1,313,095	+		MPMX19_01260	0.86	-0.6
1,313,095	+		MPMX19_01260	0.86	+0.2
1,313,095	+		MPMX19_01260	0.86	-0.9
1,313,095	+		MPMX19_01260	0.86	-0.6
1,313,095	+		MPMX19_01260	0.86	-0.3
1,313,095	+		MPMX19_01260	0.86	-0.5
1,313,095	+		MPMX19_01260	0.86	+0.0
1,313,095	+		MPMX19_01260	0.86	-0.9
1,313,095	+		MPMX19_01260	0.86	-0.2
1,313,095	+		MPMX19_01260	0.86	+0.3
1,313,095	+		MPMX19_01260	0.86	-0.6
1,313,095	+		MPMX19_01260	0.86	+0.1
1,313,095	+		MPMX19_01260	0.86	-0.5
1,313,095	+		MPMX19_01260	0.86	-0.1
1,313,095	+		MPMX19_01260	0.86	-0.4
1,313,095	+		MPMX19_01260	0.86	-0.0
1,313,095	+		MPMX19_01260	0.86	-1.4
1,313,095	+		MPMX19_01260	0.86	+0.2
1,313,095	+		MPMX19_01260	0.86	-0.4
1,313,095	+		MPMX19_01260	0.86	-1.4
1,313,096	-		MPMX19_01260	0.86	-1.4
1,313,096	-		MPMX19_01260	0.86	+1.1
1,313,096	-		MPMX19_01260	0.86	-0.2
1,313,096	-		MPMX19_01260	0.86	+0.8
1,313,096	-		MPMX19_01260	0.86	-1.4
1,313,096	-		MPMX19_01260	0.86	-1.8
1,313,096	-		MPMX19_01260	0.86	+0.1
1,313,096	-		MPMX19_01260	0.86	+0.6
1,313,096	-		MPMX19_01260	0.86	-0.2
1,313,096	-		MPMX19_01260	0.86	-0.8
1,313,096	-		MPMX19_01260	0.86	-0.9
1,313,096	-		MPMX19_01260	0.86	-0.0
1,313,096	-		MPMX19_01260	0.86	+0.1
1,313,096	-		MPMX19_01260	0.86	+0.8
1,313,096	-		MPMX19_01260	0.86	+0.2
1,313,096	-		MPMX19_01260	0.86	+0.1
1,313,096	-		MPMX19_01260	0.86	+0.8
1,313,096	-		MPMX19_01260	0.86	+1.3
1,313,096	-		MPMX19_01260	0.86	+0.9
1,313,096	-		MPMX19_01260	0.86	+0.6
1,313,096	-		MPMX19_01260	0.86	+0.4
1,313,576	+				+0.8
1,313,576	+				+0.8
1,313,576	+				-0.2
1,313,577	-				+0.7
1,313,577	-				-0.6
1,313,577	-				-0.1
1,313,577	-				+0.8
1,313,577	-				-0.2
1,313,623	-				-1.4
1,313,623	-				+1.0
1,313,681	+				-0.6
1,313,681	+				-0.2
1,313,681	+				+0.3
1,313,681	+				+0.6
1,313,681	+				-0.6
1,313,682	-				+0.0
1,313,682	-				+1.0
1,313,682	-				+0.1
1,313,682	-				+0.4
1,313,759	+		MPMX19_01261	0.12	+0.6
1,313,759	+		MPMX19_01261	0.12	+0.4
1,313,759	+		MPMX19_01261	0.12	+0.8
1,313,759	+		MPMX19_01261	0.12	+0.9
1,313,760	-		MPMX19_01261	0.12	-0.4
1,313,760	-		MPMX19_01261	0.12	+0.1
1,313,760	-		MPMX19_01261	0.12	-0.0
1,313,897	+		MPMX19_01261	0.26	-0.4
1,313,897	+		MPMX19_01261	0.26	-0.4
1,313,897	+		MPMX19_01261	0.26	+0.2
1,313,897	+		MPMX19_01261	0.26	+0.8
1,313,897	+		MPMX19_01261	0.26	+0.3
1,313,897	+		MPMX19_01261	0.26	-0.6
1,313,898	-		MPMX19_01261	0.26	-0.0
1,313,898	-		MPMX19_01261	0.26	-0.8
1,313,898	-		MPMX19_01261	0.26	+1.1
1,313,898	-		MPMX19_01261	0.26	+0.8
1,313,898	-		MPMX19_01261	0.26	-0.1
1,313,898	-		MPMX19_01261	0.26	+0.3
1,314,005	+		MPMX19_01261	0.37	-0.6
1,314,005	+		MPMX19_01261	0.37	-0.7
1,314,005	+		MPMX19_01261	0.37	-1.2
1,314,005	+		MPMX19_01261	0.37	-0.2
1,314,005	+		MPMX19_01261	0.37	+0.7
1,314,005	+		MPMX19_01261	0.37	-0.5
1,314,005	+		MPMX19_01261	0.37	-0.4
1,314,005	+		MPMX19_01261	0.37	+0.1
1,314,005	+		MPMX19_01261	0.37	-0.4
1,314,005	+		MPMX19_01261	0.37	-1.0
1,314,006	-		MPMX19_01261	0.37	-0.1
1,314,006	-		MPMX19_01261	0.37	+0.2
1,314,006	-		MPMX19_01261	0.37	-1.0
1,314,006	-		MPMX19_01261	0.37	-1.2
1,314,006	-		MPMX19_01261	0.37	+1.3
1,314,006	-		MPMX19_01261	0.37	+0.3
1,314,006	-		MPMX19_01261	0.37	+0.6
1,314,006	-		MPMX19_01261	0.37	-0.0
1,314,006	-		MPMX19_01261	0.37	-0.8
1,314,006	-		MPMX19_01261	0.37	-0.7
1,314,006	-		MPMX19_01261	0.37	-0.4
1,314,008	+		MPMX19_01261	0.37	+1.6
1,314,008	+		MPMX19_01261	0.37	+0.7
1,314,008	+		MPMX19_01261	0.37	+0.6
1,314,009	-		MPMX19_01261	0.38	-1.3
1,314,009	-		MPMX19_01261	0.38	+0.8
1,314,009	-		MPMX19_01261	0.38	+0.1
1,314,009	-		MPMX19_01261	0.38	+0.4
1,314,009	-		MPMX19_01261	0.38	-1.2
1,314,009	-		MPMX19_01261	0.38	-1.0
1,314,023	+		MPMX19_01261	0.39	-0.2
1,314,023	+		MPMX19_01261	0.39	+0.3
1,314,023	+		MPMX19_01261	0.39	+0.1
1,314,023	+		MPMX19_01261	0.39	+1.3
1,314,024	-		MPMX19_01261	0.39	-0.1
1,314,024	-		MPMX19_01261	0.39	-1.3
1,314,024	-		MPMX19_01261	0.39	-1.0
1,314,024	-		MPMX19_01261	0.39	+1.0
1,314,024	-		MPMX19_01261	0.39	+1.6
1,314,024	-		MPMX19_01261	0.39	+0.9
1,314,024	-		MPMX19_01261	0.39	-1.9
1,314,243	+		MPMX19_01261	0.62	+1.0
1,314,243	+		MPMX19_01261	0.62	-1.0
1,314,243	+		MPMX19_01261	0.62	+0.1
1,314,243	+		MPMX19_01261	0.62	+1.1
1,314,243	+		MPMX19_01261	0.62	-0.1
1,314,243	+		MPMX19_01261	0.62	-0.4
1,314,243	+		MPMX19_01261	0.62	-1.3
1,314,243	+		MPMX19_01261	0.62	+0.2
1,314,243	+		MPMX19_01261	0.62	-0.9
1,314,243	+		MPMX19_01261	0.62	+0.8
1,314,243	+		MPMX19_01261	0.62	-0.0
1,314,243	+		MPMX19_01261	0.62	-1.0
1,314,243	+		MPMX19_01261	0.62	+0.9
1,314,244	-		MPMX19_01261	0.62	-1.4
1,314,244	-		MPMX19_01261	0.62	+1.9
1,314,244	-		MPMX19_01261	0.62	-0.1
1,314,244	-		MPMX19_01261	0.62	+0.1
1,314,244	-		MPMX19_01261	0.62	+0.8
1,314,371	+		MPMX19_01261	0.75	-0.4
1,314,371	+		MPMX19_01261	0.75	+2.0
1,314,372	-		MPMX19_01261	0.75	+0.3
1,314,372	-		MPMX19_01261	0.75	-0.2
1,314,455	+		MPMX19_01261	0.84	-0.6
1,314,455	+		MPMX19_01261	0.84	-1.6
1,314,455	+		MPMX19_01261	0.84	-0.2
1,314,455	+		MPMX19_01261	0.84	+0.9
1,314,456	-		MPMX19_01261	0.84	-0.4
1,314,456	-		MPMX19_01261	0.84	+0.6
1,314,456	-		MPMX19_01261	0.84	-1.4
1,314,456	-		MPMX19_01261	0.84	+1.6
1,314,456	-		MPMX19_01261	0.84	+0.4
1,314,664	+				-0.0
1,314,664	+				-0.4
1,314,664	+				+0.8
1,314,665	-				-2.1
1,314,665	-				-0.2
1,314,665	-				-0.2
1,314,677	+				+0.7
1,314,677	+				-1.4
1,314,677	+				+0.2
1,314,677	+				+1.1
1,314,677	+				-0.6
1,314,677	+				+0.6
1,314,678	-				-0.9
1,314,678	-				-0.6
1,314,678	-				+0.8
1,314,678	-				-0.2
1,314,678	-				-0.8
1,314,678	-				+1.1
1,314,678	-				-0.8
1,314,678	-				-0.8
1,314,678	-				+0.1
1,314,678	-				-0.0
1,314,678	-				-0.0
1,314,742	+		MPMX19_01262	0.14	-0.9
1,314,742	+		MPMX19_01262	0.14	+1.3
1,314,742	+		MPMX19_01262	0.14	-0.0
1,314,743	-		MPMX19_01262	0.14	-0.0
1,314,743	-		MPMX19_01262	0.14	+0.2
1,314,743	-		MPMX19_01262	0.14	-1.6
1,314,743	-		MPMX19_01262	0.14	-1.1
1,314,743	-		MPMX19_01262	0.14	+0.6
1,314,743	-		MPMX19_01262	0.14	+0.2
1,314,778	+		MPMX19_01262	0.17	-1.0
1,314,778	+		MPMX19_01262	0.17	-0.8
1,314,778	+		MPMX19_01262	0.17	-0.3
1,314,778	+		MPMX19_01262	0.17	+0.6
1,314,778	+		MPMX19_01262	0.17	-0.9
1,314,779	-		MPMX19_01262	0.17	-1.6
1,314,779	-		MPMX19_01262	0.17	-0.8
1,314,779	-		MPMX19_01262	0.17	-0.9
1,314,779	-		MPMX19_01262	0.17	+0.8
1,314,946	+		MPMX19_01262	0.31	-0.5
1,314,946	+		MPMX19_01262	0.31	+0.1
1,314,946	+		MPMX19_01262	0.31	-0.4
1,314,946	+		MPMX19_01262	0.31	-0.2
1,314,946	+		MPMX19_01262	0.31	-0.3
1,314,946	+		MPMX19_01262	0.31	+0.6
1,314,946	+		MPMX19_01262	0.31	-1.3
1,314,946	+		MPMX19_01262	0.31	+0.2
1,314,947	-		MPMX19_01262	0.31	+0.9
1,314,947	-		MPMX19_01262	0.31	+0.2
1,314,947	-		MPMX19_01262	0.31	-0.5
1,314,947	-		MPMX19_01262	0.31	+0.1
1,314,947	-		MPMX19_01262	0.31	-0.8
1,314,947	-		MPMX19_01262	0.31	-1.4
1,314,947	-		MPMX19_01262	0.31	-0.1
1,314,947	-		MPMX19_01262	0.31	-1.7
1,314,947	-		MPMX19_01262	0.31	-2.5
1,314,982	+		MPMX19_01262	0.34	+0.2
1,314,982	+		MPMX19_01262	0.34	-1.6
1,314,982	+		MPMX19_01262	0.34	-0.1
1,314,982	+		MPMX19_01262	0.34	-0.9
1,314,982	+		MPMX19_01262	0.34	-0.6
1,314,982	+		MPMX19_01262	0.34	-0.2
1,314,982	+		MPMX19_01262	0.34	+0.3
1,314,982	+		MPMX19_01262	0.34	-1.1
1,314,982	+		MPMX19_01262	0.34	-1.4
1,314,982	+		MPMX19_01262	0.34	-1.2
1,314,982	+		MPMX19_01262	0.34	+0.2
1,314,982	+		MPMX19_01262	0.34	+0.8
1,314,982	+		MPMX19_01262	0.34	-0.6
1,314,982	+		MPMX19_01262	0.34	-0.0
1,314,982	+		MPMX19_01262	0.34	-1.4
1,314,982	+		MPMX19_01262	0.34	+0.2
1,314,982	+		MPMX19_01262	0.34	-1.3
1,314,982	+		MPMX19_01262	0.34	-1.4
1,314,982	+		MPMX19_01262	0.34	+0.7
1,314,982	+		MPMX19_01262	0.34	-1.2
1,314,982	+		MPMX19_01262	0.34	-0.8
1,314,982	+		MPMX19_01262	0.34	-2.3
1,314,982	+		MPMX19_01262	0.34	+0.7
1,314,982	+		MPMX19_01262	0.34	+1.6
1,314,982	+		MPMX19_01262	0.34	-1.6
1,314,982	+		MPMX19_01262	0.34	-1.0
1,314,982	+		MPMX19_01262	0.34	-2.1
1,314,982	+		MPMX19_01262	0.34	+0.6
1,314,982	+		MPMX19_01262	0.34	-1.2
1,314,982	+		MPMX19_01262	0.34	+1.0
1,314,982	+		MPMX19_01262	0.34	-1.1
1,314,983	-		MPMX19_01262	0.34	-0.4
1,314,983	-		MPMX19_01262	0.34	-0.4
1,314,983	-		MPMX19_01262	0.34	-0.3
1,314,983	-		MPMX19_01262	0.34	-0.7
1,314,983	-		MPMX19_01262	0.34	-0.8
1,314,983	-		MPMX19_01262	0.34	-1.2
1,314,983	-		MPMX19_01262	0.34	+0.1
1,314,983	-		MPMX19_01262	0.34	-0.3
1,314,983	-		MPMX19_01262	0.34	-0.0
1,314,983	-		MPMX19_01262	0.34	-0.3
1,314,983	-		MPMX19_01262	0.34	-1.0
1,314,983	-		MPMX19_01262	0.34	-0.6
1,314,983	-		MPMX19_01262	0.34	-0.7
1,314,983	-		MPMX19_01262	0.34	-0.0
1,314,983	-		MPMX19_01262	0.34	+0.4
1,314,983	-		MPMX19_01262	0.34	-0.7
1,314,983	-		MPMX19_01262	0.34	+0.6
1,314,983	-		MPMX19_01262	0.34	-0.4
1,314,983	-		MPMX19_01262	0.34	-0.9
1,314,983	-		MPMX19_01262	0.34	+0.2
1,314,983	-		MPMX19_01262	0.34	-1.2
1,314,983	-		MPMX19_01262	0.34	-0.3
1,314,983	-		MPMX19_01262	0.34	-0.8
1,314,983	-		MPMX19_01262	0.34	+0.1
1,314,983	-		MPMX19_01262	0.34	-0.5
1,314,983	-		MPMX19_01262	0.34	+0.4
1,314,983	-		MPMX19_01262	0.34	-1.1
1,314,983	-		MPMX19_01262	0.34	+0.6
1,314,983	-		MPMX19_01262	0.34	-1.2
1,314,983	-		MPMX19_01262	0.34	+0.1
1,314,983	-		MPMX19_01262	0.34	+0.2
1,314,983	-		MPMX19_01262	0.34	-0.4
1,314,983	-		MPMX19_01262	0.34	-0.4
1,314,983	-		MPMX19_01262	0.34	-0.9
1,314,983	-		MPMX19_01262	0.34	-1.0
1,314,983	-		MPMX19_01262	0.34	-0.2
1,314,983	-		MPMX19_01262	0.34	-0.3
1,314,983	-		MPMX19_01262	0.34	+0.1
1,314,983	-		MPMX19_01262	0.34	-0.8
1,315,044	+		MPMX19_01262	0.39	-1.0
1,315,044	+		MPMX19_01262	0.39	-1.1
1,315,044	+		MPMX19_01262	0.39	-0.7
1,315,045	-		MPMX19_01262	0.39	-0.8
1,315,249	+		MPMX19_01262	0.56	-0.1
1,315,250	-		MPMX19_01262	0.56	-1.7
1,315,345	+		MPMX19_01262	0.64	-0.7
1,315,345	+		MPMX19_01262	0.64	-1.6
1,315,345	+		MPMX19_01262	0.64	-0.5
1,315,345	+		MPMX19_01262	0.64	+0.0
1,315,345	+		MPMX19_01262	0.64	-1.0
1,315,345	+		MPMX19_01262	0.64	+0.9
1,315,345	+		MPMX19_01262	0.64	-1.2
1,315,345	+		MPMX19_01262	0.64	-2.5
1,315,345	+		MPMX19_01262	0.64	-1.8
1,315,345	+		MPMX19_01262	0.64	-0.4
1,315,345	+		MPMX19_01262	0.64	-2.8
1,315,345	+		MPMX19_01262	0.64	-1.6
1,315,345	+		MPMX19_01262	0.64	-1.2
1,315,345	+		MPMX19_01262	0.64	-2.1
1,315,345	+		MPMX19_01262	0.64	-0.8
1,315,345	+		MPMX19_01262	0.64	-0.8
1,315,345	+		MPMX19_01262	0.64	-0.2
1,315,345	+		MPMX19_01262	0.64	-1.0
1,315,345	+		MPMX19_01262	0.64	-2.9
1,315,346	-		MPMX19_01262	0.64	+0.4
1,315,346	-		MPMX19_01262	0.64	-0.2
1,315,346	-		MPMX19_01262	0.64	-0.3
1,315,346	-		MPMX19_01262	0.64	+0.2
1,315,346	-		MPMX19_01262	0.64	-1.2
1,315,346	-		MPMX19_01262	0.64	+1.3
1,315,346	-		MPMX19_01262	0.64	-0.6
1,315,346	-		MPMX19_01262	0.64	-0.6
1,315,346	-		MPMX19_01262	0.64	-0.6
1,315,346	-		MPMX19_01262	0.64	+1.2
1,315,346	-		MPMX19_01262	0.64	-1.2
1,315,346	-		MPMX19_01262	0.64	+0.2
1,315,346	-		MPMX19_01262	0.64	+0.7
1,315,346	-		MPMX19_01262	0.64	-1.0
1,315,346	-		MPMX19_01262	0.64	+0.3
1,315,405	+		MPMX19_01262	0.69	-2.0
1,315,405	+		MPMX19_01262	0.69	-0.5
1,315,405	+		MPMX19_01262	0.69	-0.3
1,315,405	+		MPMX19_01262	0.69	-0.2
1,315,405	+		MPMX19_01262	0.69	-1.0
1,315,405	+		MPMX19_01262	0.69	+1.6
1,315,405	+		MPMX19_01262	0.69	-0.2
1,315,405	+		MPMX19_01262	0.69	+1.2
1,315,405	+		MPMX19_01262	0.69	-0.9
1,315,405	+		MPMX19_01262	0.69	-0.2
1,315,405	+		MPMX19_01262	0.69	-0.6
1,315,406	-		MPMX19_01262	0.69	-0.9
1,315,406	-		MPMX19_01262	0.69	+0.2
1,315,406	-		MPMX19_01262	0.69	+0.6
1,315,406	-		MPMX19_01262	0.69	+0.6
1,315,406	-		MPMX19_01262	0.69	+1.2
1,315,406	-		MPMX19_01262	0.69	+0.1
1,315,406	-		MPMX19_01262	0.69	-0.6
1,315,406	-		MPMX19_01262	0.69	+0.2
1,315,406	-		MPMX19_01262	0.69	-1.7
1,315,406	-		MPMX19_01262	0.69	-1.2
1,315,406	-		MPMX19_01262	0.69	+0.6