Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF924 and GFF925 are separated by 72 nucleotides GFF925 and GFF926 are separated by 112 nucleotides
GFF924 - Beta-hexosaminidase, at 160,497 to 161,543
GFF924
GFF925 - hypothetical protein, at 161,616 to 162,515
GFF925
GFF926 - Modulator of FtsH protease YccA, at 162,628 to 163,314
GFF926
Position (kb) 161
162
163 Strain fitness (log2 ratio) -2
-1
0
1
2 at 160.646 kb on + strand, within GFF924 at 160.648 kb on + strand, within GFF924 at 160.648 kb on + strand, within GFF924 at 160.648 kb on + strand, within GFF924 at 160.648 kb on + strand, within GFF924 at 160.760 kb on + strand, within GFF924 at 160.761 kb on - strand, within GFF924 at 160.859 kb on + strand, within GFF924 at 160.881 kb on + strand, within GFF924 at 160.881 kb on + strand, within GFF924 at 160.882 kb on - strand, within GFF924 at 160.971 kb on - strand, within GFF924 at 161.090 kb on + strand, within GFF924 at 161.113 kb on + strand, within GFF924 at 161.114 kb on - strand, within GFF924 at 161.155 kb on - strand, within GFF924 at 161.341 kb on + strand, within GFF924 at 161.341 kb on + strand, within GFF924 at 161.408 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.427 kb on - strand, within GFF924 at 161.453 kb on + strand at 161.454 kb on - strand at 161.464 kb on + strand at 161.465 kb on - strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.486 kb on - strand at 161.486 kb on - strand at 161.566 kb on - strand at 161.573 kb on + strand at 161.573 kb on + strand at 161.573 kb on + strand at 161.573 kb on + strand at 161.573 kb on + strand at 161.587 kb on + strand at 161.587 kb on + strand at 161.587 kb on + strand at 161.588 kb on - strand at 161.598 kb on + strand at 161.616 kb on - strand at 161.616 kb on - strand at 161.658 kb on + strand at 161.658 kb on + strand at 161.658 kb on + strand at 161.658 kb on + strand at 161.659 kb on - strand at 161.659 kb on - strand at 161.681 kb on + strand at 161.694 kb on + strand at 161.704 kb on + strand at 161.704 kb on + strand at 161.740 kb on + strand, within GFF925 at 161.746 kb on + strand, within GFF925 at 161.748 kb on + strand, within GFF925 at 161.748 kb on + strand, within GFF925 at 161.748 kb on + strand, within GFF925 at 161.778 kb on + strand, within GFF925 at 161.779 kb on - strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.854 kb on - strand, within GFF925 at 161.854 kb on - strand, within GFF925 at 161.854 kb on - strand, within GFF925 at 161.858 kb on - strand, within GFF925 at 161.909 kb on + strand, within GFF925 at 161.909 kb on + strand, within GFF925 at 161.943 kb on + strand, within GFF925 at 161.944 kb on - strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.955 kb on + strand, within GFF925 at 161.955 kb on + strand, within GFF925 at 161.985 kb on + strand, within GFF925 at 161.985 kb on + strand, within GFF925 at 161.985 kb on + strand, within GFF925 at 161.985 kb on + strand, within GFF925 at 161.986 kb on - strand, within GFF925 at 161.986 kb on - strand, within GFF925 at 161.986 kb on - strand, within GFF925 at 162.090 kb on + strand, within GFF925 at 162.115 kb on + strand, within GFF925 at 162.149 kb on + strand, within GFF925 at 162.149 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.214 kb on - strand, within GFF925 at 162.214 kb on - strand, within GFF925 at 162.214 kb on - strand, within GFF925 at 162.228 kb on + strand, within GFF925 at 162.228 kb on + strand, within GFF925 at 162.229 kb on - strand, within GFF925 at 162.336 kb on - strand, within GFF925 at 162.400 kb on - strand, within GFF925 at 162.487 kb on + strand at 162.513 kb on + strand at 162.513 kb on + strand at 162.580 kb on + strand at 162.580 kb on + strand at 162.580 kb on + strand at 162.580 kb on + strand at 162.580 kb on + strand at 162.580 kb on + strand at 162.580 kb on + strand at 162.584 kb on + strand at 162.599 kb on + strand at 162.599 kb on + strand at 162.599 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.622 kb on + strand at 162.623 kb on - strand at 162.627 kb on + strand at 162.627 kb on + strand at 162.627 kb on + strand at 162.627 kb on + strand at 162.636 kb on + strand at 162.665 kb on + strand at 162.686 kb on + strand at 162.696 kb on + strand at 162.696 kb on + strand at 162.696 kb on + strand at 162.696 kb on + strand at 162.696 kb on + strand at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.700 kb on + strand, within GFF926 at 162.745 kb on + strand, within GFF926 at 162.745 kb on + strand, within GFF926 at 162.745 kb on + strand, within GFF926 at 162.745 kb on + strand, within GFF926 at 162.745 kb on + strand, within GFF926 at 162.745 kb on + strand, within GFF926 at 162.745 kb on + strand, within GFF926 at 162.810 kb on + strand, within GFF926 at 162.810 kb on + strand, within GFF926 at 162.810 kb on + strand, within GFF926 at 162.810 kb on + strand, within GFF926 at 162.828 kb on + strand, within GFF926 at 162.828 kb on + strand, within GFF926 at 162.834 kb on + strand, within GFF926 at 162.834 kb on + strand, within GFF926 at 162.866 kb on + strand, within GFF926 at 162.921 kb on + strand, within GFF926 at 163.001 kb on + strand, within GFF926 at 163.002 kb on - strand, within GFF926 at 163.067 kb on + strand, within GFF926 at 163.067 kb on + strand, within GFF926 at 163.101 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.104 kb on + strand, within GFF926 at 163.108 kb on + strand, within GFF926 at 163.108 kb on + strand, within GFF926 at 163.108 kb on + strand, within GFF926 at 163.108 kb on + strand, within GFF926 at 163.154 kb on + strand, within GFF926 at 163.180 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.219 kb on + strand, within GFF926 at 163.220 kb on - strand, within GFF926 at 163.243 kb on + strand, within GFF926 at 163.255 kb on + strand at 163.255 kb on + strand at 163.255 kb on + strand at 163.255 kb on + strand at 163.255 kb on + strand at 163.255 kb on + strand at 163.255 kb on + strand at 163.282 kb on - strand at 163.295 kb on + strand at 163.295 kb on + strand at 163.295 kb on + strand at 163.298 kb on + strand at 163.312 kb on + strand at 163.313 kb on - strand at 163.432 kb on + strand at 163.432 kb on + strand at 163.433 kb on - strand at 163.433 kb on - strand at 163.481 kb on - strand at 163.508 kb on + strand at 163.509 kb on - strand at 163.513 kb on - strand at 163.513 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 160,646 + GFF924 0.14 -0.8 160,648 + GFF924 0.14 -1.4 160,648 + GFF924 0.14 -0.6 160,648 + GFF924 0.14 -0.8 160,648 + GFF924 0.14 -1.4 160,760 + GFF924 0.25 -1.8 160,761 - GFF924 0.25 -0.4 160,859 + GFF924 0.35 +0.6 160,881 + GFF924 0.37 -0.0 160,881 + GFF924 0.37 -1.0 160,882 - GFF924 0.37 -1.0 160,971 - GFF924 0.45 -1.4 161,090 + GFF924 0.57 -0.4 161,113 + GFF924 0.59 -1.6 161,114 - GFF924 0.59 +0.2 161,155 - GFF924 0.63 -0.6 161,341 + GFF924 0.81 -1.4 161,341 + GFF924 0.81 -0.4 161,408 + GFF924 0.87 +0.6 161,426 + GFF924 0.89 -1.0 161,426 + GFF924 0.89 -1.0 161,426 + GFF924 0.89 -1.0 161,426 + GFF924 0.89 +0.2 161,426 + GFF924 0.89 -1.5 161,427 - GFF924 0.89 +0.4 161,453 + -0.0 161,454 - -0.4 161,464 + +0.4 161,465 - -1.4 161,485 + +1.0 161,485 + -0.9 161,485 + -1.5 161,485 + -0.3 161,485 + -0.6 161,485 + -0.6 161,485 + -1.0 161,486 - -1.6 161,486 - +0.2 161,566 - -0.8 161,573 + -1.6 161,573 + -1.8 161,573 + -1.0 161,573 + +0.1 161,573 + +0.6 161,587 + -0.4 161,587 + +0.1 161,587 + -0.6 161,588 - -0.4 161,598 + +0.7 161,616 - -2.0 161,616 - -1.6 161,658 + +0.3 161,658 + -0.0 161,658 + -0.5 161,658 + +0.6 161,659 - +0.6 161,659 - -0.0 161,681 + -0.8 161,694 + -0.6 161,704 + -1.8 161,704 + -0.0 161,740 + GFF925 0.14 -1.0 161,746 + GFF925 0.14 -0.4 161,748 + GFF925 0.15 -1.4 161,748 + GFF925 0.15 +0.6 161,748 + GFF925 0.15 -0.8 161,778 + GFF925 0.18 -0.6 161,779 - GFF925 0.18 -2.0 161,853 + GFF925 0.26 -0.6 161,853 + GFF925 0.26 -2.0 161,853 + GFF925 0.26 +1.0 161,853 + GFF925 0.26 -0.4 161,853 + GFF925 0.26 -1.0 161,853 + GFF925 0.26 -1.1 161,854 - GFF925 0.26 -1.5 161,854 - GFF925 0.26 -2.0 161,854 - GFF925 0.26 -0.1 161,858 - GFF925 0.27 -0.8 161,909 + GFF925 0.33 -0.4 161,909 + GFF925 0.33 -0.4 161,943 + GFF925 0.36 -0.0 161,944 - GFF925 0.36 -0.0 161,948 + GFF925 0.37 -0.0 161,948 + GFF925 0.37 -0.3 161,948 + GFF925 0.37 -1.4 161,948 + GFF925 0.37 -0.3 161,948 + GFF925 0.37 -0.7 161,948 + GFF925 0.37 +0.6 161,955 + GFF925 0.38 -0.4 161,955 + GFF925 0.38 -0.8 161,985 + GFF925 0.41 -2.2 161,985 + GFF925 0.41 -0.0 161,985 + GFF925 0.41 -0.1 161,985 + GFF925 0.41 -0.4 161,986 - GFF925 0.41 -1.4 161,986 - GFF925 0.41 -0.5 161,986 - GFF925 0.41 +0.6 162,090 + GFF925 0.53 -0.0 162,115 + GFF925 0.55 -0.4 162,149 + GFF925 0.59 -2.4 162,149 + GFF925 0.59 -1.0 162,213 + GFF925 0.66 +0.5 162,213 + GFF925 0.66 -1.7 162,213 + GFF925 0.66 -0.4 162,213 + GFF925 0.66 -0.3 162,213 + GFF925 0.66 -0.4 162,213 + GFF925 0.66 +0.1 162,214 - GFF925 0.66 +1.0 162,214 - GFF925 0.66 -1.6 162,214 - GFF925 0.66 -0.6 162,228 + GFF925 0.68 -0.6 162,228 + GFF925 0.68 +0.6 162,229 - GFF925 0.68 -1.4 162,336 - GFF925 0.80 -0.4 162,400 - GFF925 0.87 -1.6 162,487 + -1.0 162,513 + -1.0 162,513 + +0.3 162,580 + -0.3 162,580 + -1.6 162,580 + +1.1 162,580 + +0.2 162,580 + -0.5 162,580 + -0.0 162,580 + -1.4 162,584 + -0.6 162,599 + -0.4 162,599 + -0.7 162,599 + +0.2 162,622 + -0.0 162,622 + -0.0 162,622 + -0.4 162,622 + +0.2 162,622 + -1.0 162,622 + -1.0 162,622 + +0.7 162,622 + -1.1 162,622 + -0.1 162,622 + -1.0 162,622 + -0.6 162,622 + +0.2 162,622 + -0.2 162,622 + -1.0 162,622 + -1.8 162,623 - +0.6 162,627 + +0.2 162,627 + +0.4 162,627 + +0.1 162,627 + +1.0 162,636 + +0.2 162,665 + -0.7 162,686 + -1.8 162,696 + -1.0 162,696 + -0.9 162,696 + -0.2 162,696 + -0.0 162,696 + +0.2 162,700 + GFF926 0.10 -0.8 162,700 + GFF926 0.10 +0.2 162,700 + GFF926 0.10 +0.1 162,700 + GFF926 0.10 -2.3 162,700 + GFF926 0.10 +0.1 162,700 + GFF926 0.10 -0.8 162,700 + GFF926 0.10 -0.6 162,700 + GFF926 0.10 +0.2 162,700 + GFF926 0.10 +0.5 162,700 + GFF926 0.10 -1.6 162,700 + GFF926 0.10 -1.3 162,700 + GFF926 0.10 +1.0 162,700 + GFF926 0.10 -0.6 162,700 + GFF926 0.10 +1.0 162,700 + GFF926 0.10 +0.2 162,745 + GFF926 0.17 -0.4 162,745 + GFF926 0.17 +0.2 162,745 + GFF926 0.17 -0.3 162,745 + GFF926 0.17 -1.4 162,745 + GFF926 0.17 +0.5 162,745 + GFF926 0.17 -2.4 162,745 + GFF926 0.17 -0.8 162,810 + GFF926 0.26 -0.7 162,810 + GFF926 0.26 +2.0 162,810 + GFF926 0.26 +0.2 162,810 + GFF926 0.26 -0.4 162,828 + GFF926 0.29 -1.4 162,828 + GFF926 0.29 -0.4 162,834 + GFF926 0.30 -1.5 162,834 + GFF926 0.30 -0.4 162,866 + GFF926 0.35 -0.9 162,921 + GFF926 0.43 -0.1 163,001 + GFF926 0.54 -1.2 163,002 - GFF926 0.54 -0.9 163,067 + GFF926 0.64 -0.0 163,067 + GFF926 0.64 +0.2 163,101 + GFF926 0.69 -0.3 163,104 + GFF926 0.69 -0.0 163,104 + GFF926 0.69 -1.0 163,104 + GFF926 0.69 -0.4 163,104 + GFF926 0.69 -0.0 163,104 + GFF926 0.69 -0.4 163,104 + GFF926 0.69 -0.6 163,104 + GFF926 0.69 -1.1 163,104 + GFF926 0.69 -0.8 163,104 + GFF926 0.69 +0.1 163,104 + GFF926 0.69 -0.0 163,104 + GFF926 0.69 -0.5 163,108 + GFF926 0.70 -0.3 163,108 + GFF926 0.70 +0.6 163,108 + GFF926 0.70 +0.5 163,108 + GFF926 0.70 -0.6 163,154 + GFF926 0.77 -0.8 163,180 + GFF926 0.80 -0.9 163,219 + GFF926 0.86 -0.5 163,219 + GFF926 0.86 -0.3 163,219 + GFF926 0.86 -0.0 163,219 + GFF926 0.86 -0.2 163,219 + GFF926 0.86 -2.0 163,219 + GFF926 0.86 -0.6 163,219 + GFF926 0.86 -0.2 163,219 + GFF926 0.86 -0.4 163,219 + GFF926 0.86 -0.0 163,219 + GFF926 0.86 -0.5 163,220 - GFF926 0.86 -2.0 163,243 + GFF926 0.90 -1.5 163,255 + -0.8 163,255 + -0.8 163,255 + -0.8 163,255 + -0.3 163,255 + -0.6 163,255 + -0.5 163,255 + -0.8 163,282 - -1.2 163,295 + +0.2 163,295 + +0.1 163,295 + -1.0 163,298 + -0.0 163,312 + +1.0 163,313 - -1.0 163,432 + -1.0 163,432 + +1.0 163,433 - -0.0 163,433 - -0.2 163,481 - +0.1 163,508 + -0.6 163,509 - -0.3 163,513 - -0.6 163,513 - -0.4
Or see this region's nucleotide sequence