Strain Fitness in Methylophilus sp. DMC18 around GFF889

Experiment: Methanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Methanol (C)
123,983	-				-0.0
124,066	+				+1.0
124,067	-		GFF888	0.10	-0.0
124,101	-		GFF888	0.13	-0.0
124,109	+		GFF888	0.14	-0.0
124,113	+		GFF888	0.15	-1.0
124,242	+		GFF888	0.28	-0.9
124,242	+		GFF888	0.28	+0.5
124,242	+		GFF888	0.28	+0.6
124,249	-		GFF888	0.28	+0.2
124,249	-		GFF888	0.28	-1.0
124,341	+		GFF888	0.38	-1.2
124,341	+		GFF888	0.38	-1.1
124,341	+		GFF888	0.38	+0.8
124,342	-		GFF888	0.38	-1.4
124,661	+		GFF888	0.70	+0.6
124,710	+		GFF888	0.75	+0.0
124,710	+		GFF888	0.75	-1.2
124,831	-		GFF888	0.87	-0.1
124,831	-		GFF888	0.87	-0.3
124,836	-		GFF888	0.87	-1.4
124,847	-		GFF888	0.88	-0.8
124,892	+				-0.2
124,901	+				-0.0
124,902	-				-1.0
124,902	-				-0.8
124,902	-				-1.6
124,926	-				-0.4
125,380	+		GFF889	0.25	-2.6
125,507	+		GFF889	0.33	-2.2
125,541	+		GFF889	0.35	+0.6
125,678	+		GFF889	0.43	+1.3
125,799	+		GFF889	0.50	-0.0
125,848	+		GFF889	0.53	-1.2
125,848	+		GFF889	0.53	-1.4
125,852	+		GFF889	0.53	+0.2
125,852	+		GFF889	0.53	-0.3
125,852	+		GFF889	0.53	-2.5
125,853	-		GFF889	0.53	-2.0
125,896	-		GFF889	0.56	-1.8
126,432	+		GFF889	0.88	-0.3
126,570	+				-1.8
126,592	-				-2.2
126,672	-				-1.0
126,672	-				-0.7
126,672	-				-2.0
126,678	+				-0.3
126,678	+				+0.3
126,679	-				-0.2
126,679	-				+0.2
126,679	-				+0.3
126,683	+				+0.2
126,683	+				-0.8
126,683	+				-0.3
126,683	+				-1.7
126,684	-				+0.2
126,684	-				-0.1
126,684	-				-0.6
126,688	-				-0.5
126,688	-				-1.8
126,705	+				+0.2
126,706	-				+1.0
126,707	+				-0.3
126,707	+				-0.5
126,709	+				-0.2
126,709	+				+0.2
126,709	+				-1.0
126,731	+				+0.6
126,732	-				+0.6
126,744	+				-0.3
126,753	+				+0.2
126,753	+				+0.7
126,753	+				-0.6
126,753	+				-0.4
126,754	-				-1.0
126,754	-				+0.1
126,754	-				+0.2
126,774	-				-0.6
126,774	-				-0.6
126,774	-				+0.2
126,819	+				+1.2
126,819	+				-0.4
126,819	+				-0.4
126,820	-				-1.5
126,820	-				-0.6
126,820	-				+0.1
126,820	-				+1.0
126,820	-				-0.0
126,823	+				-0.0
126,838	+				-0.5
126,838	+				-0.4
126,839	-				-2.0
126,842	+				+1.0
126,842	+				+0.3
126,843	-				-1.0
126,843	-				+0.4
126,843	-				+0.6
126,843	-				-0.7
126,843	-				-0.6
126,880	-				+1.0
126,899	-				-1.4
126,899	-				-0.0
126,899	-				-0.4
126,915	+		GFF890	0.11	-1.0
126,915	+		GFF890	0.11	-0.0
126,915	+		GFF890	0.11	+1.0
126,915	+		GFF890	0.11	-0.5
126,915	+		GFF890	0.11	-1.7
126,949	+		GFF890	0.15	+0.6
126,949	+		GFF890	0.15	+0.1
126,949	+		GFF890	0.15	+0.2
126,949	+		GFF890	0.15	-0.8
126,950	-		GFF890	0.15	-0.6
126,950	-		GFF890	0.15	+0.6
126,950	-		GFF890	0.15	-0.8
126,951	+		GFF890	0.15	-1.0
126,951	+		GFF890	0.15	-0.0
126,951	+		GFF890	0.15	-2.0
126,951	+		GFF890	0.15	-0.4
126,990	+		GFF890	0.19	+0.2
126,990	+		GFF890	0.19	-1.7
126,990	+		GFF890	0.19	-0.2
126,991	-		GFF890	0.19	-0.4
127,086	-		GFF890	0.30	-0.6
127,103	+		GFF890	0.32	-3.2
127,124	+		GFF890	0.35	+0.1
127,129	+		GFF890	0.35	-0.9
127,130	-		GFF890	0.36	-1.6
127,130	-		GFF890	0.36	-1.8
127,148	+		GFF890	0.38	-0.9
127,148	+		GFF890	0.38	+0.6
127,149	-		GFF890	0.38	-1.1
127,149	-		GFF890	0.38	-0.6
127,235	+		GFF890	0.48	-0.0
127,236	-		GFF890	0.48	-1.4
127,236	-		GFF890	0.48	-1.7
127,236	-		GFF890	0.48	-1.8
127,236	-		GFF890	0.48	-0.4
127,236	-		GFF890	0.48	+0.7
127,272	+		GFF890	0.52	-1.0
127,272	+		GFF890	0.52	-0.2
127,272	+		GFF890	0.52	-0.1
127,272	+		GFF890	0.52	+1.0
127,272	+		GFF890	0.52	-0.0
127,273	-		GFF890	0.52	-1.8
127,274	+		GFF890	0.52	-0.7
127,278	-		GFF890	0.53	+0.1
127,278	-		GFF890	0.53	+0.3
127,295	+		GFF890	0.55	+0.6
127,295	+		GFF890	0.55	-0.4
127,295	+		GFF890	0.55	-0.4
127,323	+		GFF890	0.58	+0.1
127,323	+		GFF890	0.58	+0.2
127,323	+		GFF890	0.58	-0.6
127,323	+		GFF890	0.58	+0.1
127,324	-		GFF890	0.58	-1.7
127,324	-		GFF890	0.58	-0.0
127,324	-		GFF890	0.58	+0.6
127,324	-		GFF890	0.58	-0.6
127,358	+		GFF890	0.62	-0.8
127,403	+		GFF890	0.67	-0.9
127,404	-		GFF890	0.67	-1.0
127,404	-		GFF890	0.67	-0.0
127,404	-		GFF890	0.67	-0.2
127,448	+		GFF890	0.72	+0.6
127,448	+		GFF890	0.72	-0.5
127,448	+		GFF890	0.72	-2.0
127,448	+		GFF890	0.72	-1.5
127,449	-		GFF890	0.72	-2.4
127,509	+		GFF890	0.79	-1.7
127,510	-		GFF890	0.79	+0.1
127,510	-		GFF890	0.79	+1.0
127,513	+		GFF890	0.80	-1.0
127,513	+		GFF890	0.80	-0.4
127,513	+		GFF890	0.80	-0.4
127,513	+		GFF890	0.80	-0.0
127,514	-		GFF890	0.80	-0.2
127,514	-		GFF890	0.80	+1.8
127,526	+		GFF890	0.81	+0.2
127,526	+		GFF890	0.81	-1.0
127,526	+		GFF890	0.81	-1.4
127,527	-		GFF890	0.81	+0.3
127,527	-		GFF890	0.81	+0.4
127,529	+		GFF890	0.82	+1.0
127,537	+		GFF890	0.82	+0.1
127,537	+		GFF890	0.82	-0.0
127,537	+		GFF890	0.82	-1.8
127,537	+		GFF890	0.82	-0.2
127,538	-		GFF890	0.83	+0.8
127,538	-		GFF890	0.83	-0.3
127,538	-		GFF890	0.83	+0.3
127,538	-		GFF890	0.83	+0.2
127,538	-		GFF890	0.83	-0.4
127,583	+		GFF890	0.88	-0.2
127,613	+				-0.4
127,613	+				-1.0
127,613	+				+0.3
127,622	+				-0.1
127,622	+				-0.6
127,633	+				-2.1
127,634	-				+0.2
127,634	-				-0.4