Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF86 and GFF87 are separated by 51 nucleotides GFF87 and GFF88 are separated by 89 nucleotides GFF88 and GFF89 are separated by 9 nucleotides GFF89 and GFF90 are separated by 12 nucleotides
GFF86 - hypothetical protein, at 98,302 to 98,781
GFF86
GFF87 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 98,833 to 99,213
GFF87
GFF88 - Response regulator UvrY, at 99,303 to 99,935
GFF88
GFF89 - hypothetical protein, at 99,945 to 100,448
GFF89
GFF90 - hypothetical protein, at 100,461 to 100,877
GFF90
Position (kb) 99
100 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 98.304 kb on - strand at 98.432 kb on + strand, within GFF86 at 98.432 kb on + strand, within GFF86 at 98.432 kb on + strand, within GFF86 at 98.432 kb on + strand, within GFF86 at 98.432 kb on + strand, within GFF86 at 98.432 kb on + strand, within GFF86 at 98.432 kb on + strand, within GFF86 at 98.432 kb on + strand, within GFF86 at 98.433 kb on - strand, within GFF86 at 98.433 kb on - strand, within GFF86 at 98.433 kb on - strand, within GFF86 at 98.433 kb on - strand, within GFF86 at 98.486 kb on + strand, within GFF86 at 98.487 kb on - strand, within GFF86 at 98.499 kb on - strand, within GFF86 at 98.499 kb on - strand, within GFF86 at 98.499 kb on - strand, within GFF86 at 98.499 kb on - strand, within GFF86 at 98.520 kb on + strand, within GFF86 at 98.520 kb on + strand, within GFF86 at 98.521 kb on - strand, within GFF86 at 98.639 kb on + strand, within GFF86 at 98.639 kb on + strand, within GFF86 at 98.640 kb on - strand, within GFF86 at 98.640 kb on - strand, within GFF86 at 98.640 kb on - strand, within GFF86 at 98.643 kb on + strand, within GFF86 at 98.644 kb on - strand, within GFF86 at 98.654 kb on - strand, within GFF86 at 98.660 kb on + strand, within GFF86 at 98.660 kb on + strand, within GFF86 at 98.661 kb on - strand, within GFF86 at 98.661 kb on - strand, within GFF86 at 98.750 kb on + strand at 98.750 kb on + strand at 98.750 kb on + strand at 98.750 kb on + strand at 98.750 kb on + strand at 98.751 kb on - strand at 98.751 kb on - strand at 98.751 kb on - strand at 98.751 kb on - strand at 98.751 kb on - strand at 98.751 kb on - strand at 98.751 kb on - strand at 98.758 kb on + strand at 98.830 kb on + strand at 98.831 kb on - strand at 98.834 kb on + strand at 98.834 kb on + strand at 98.834 kb on + strand at 98.834 kb on + strand at 98.834 kb on + strand at 98.835 kb on - strand at 98.835 kb on - strand at 98.835 kb on - strand at 98.835 kb on - strand at 98.835 kb on - strand at 98.835 kb on - strand at 99.214 kb on - strand at 99.214 kb on - strand at 99.214 kb on - strand at 99.214 kb on - strand at 99.246 kb on - strand at 99.251 kb on - strand at 99.251 kb on - strand at 99.251 kb on - strand at 99.291 kb on - strand at 99.305 kb on - strand at 99.309 kb on - strand at 99.309 kb on - strand at 99.309 kb on - strand at 99.309 kb on - strand at 99.313 kb on - strand at 99.319 kb on + strand at 99.331 kb on + strand at 99.331 kb on + strand at 99.332 kb on - strand at 99.332 kb on - strand at 99.332 kb on - strand at 99.332 kb on - strand at 99.332 kb on - strand at 99.334 kb on + strand at 99.334 kb on + strand at 99.334 kb on + strand at 99.335 kb on - strand at 99.335 kb on - strand at 99.335 kb on - strand at 99.388 kb on + strand, within GFF88 at 99.389 kb on - strand, within GFF88 at 99.408 kb on - strand, within GFF88 at 99.502 kb on - strand, within GFF88 at 99.565 kb on + strand, within GFF88 at 99.634 kb on + strand, within GFF88 at 99.635 kb on - strand, within GFF88 at 99.635 kb on - strand, within GFF88 at 99.635 kb on - strand, within GFF88 at 99.771 kb on + strand, within GFF88 at 99.771 kb on + strand, within GFF88 at 99.772 kb on - strand, within GFF88 at 99.772 kb on - strand, within GFF88 at 99.772 kb on - strand, within GFF88 at 99.773 kb on + strand, within GFF88 at 99.781 kb on - strand, within GFF88 at 99.981 kb on - strand at 100.047 kb on + strand, within GFF89 at 100.048 kb on - strand, within GFF89 at 100.346 kb on - strand, within GFF89 at 100.380 kb on - strand, within GFF89 at 100.380 kb on - strand, within GFF89 at 100.408 kb on - strand at 100.408 kb on - strand at 100.440 kb on + strand at 100.441 kb on - strand at 100.448 kb on + strand at 100.448 kb on + strand at 100.459 kb on - strand at 100.463 kb on - strand at 100.524 kb on + strand, within GFF90 at 100.525 kb on - strand, within GFF90 at 100.583 kb on - strand, within GFF90 at 100.583 kb on - strand, within GFF90 at 100.583 kb on - strand, within GFF90 at 100.587 kb on - strand, within GFF90 at 100.587 kb on - strand, within GFF90 at 100.587 kb on - strand, within GFF90 at 100.689 kb on - strand, within GFF90 at 100.844 kb on + strand at 100.845 kb on - strand at 100.845 kb on - strand at 100.902 kb on - strand at 100.902 kb on - strand at 100.930 kb on + strand at 100.931 kb on - strand at 100.931 kb on - strand at 100.931 kb on - strand at 100.931 kb on - strand at 100.932 kb on + strand at 100.933 kb on - strand at 100.933 kb on - strand at 100.933 kb on - strand at 100.933 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 98,304 - -0.4 98,432 + GFF86 0.27 +0.4 98,432 + GFF86 0.27 -1.8 98,432 + GFF86 0.27 -0.3 98,432 + GFF86 0.27 +0.2 98,432 + GFF86 0.27 +1.0 98,432 + GFF86 0.27 -0.3 98,432 + GFF86 0.27 +1.0 98,432 + GFF86 0.27 +0.3 98,433 - GFF86 0.27 -0.5 98,433 - GFF86 0.27 -0.7 98,433 - GFF86 0.27 -0.2 98,433 - GFF86 0.27 -0.5 98,486 + GFF86 0.38 +0.1 98,487 - GFF86 0.39 -1.0 98,499 - GFF86 0.41 -0.4 98,499 - GFF86 0.41 -1.6 98,499 - GFF86 0.41 +0.7 98,499 - GFF86 0.41 -1.4 98,520 + GFF86 0.45 -0.1 98,520 + GFF86 0.45 -1.3 98,521 - GFF86 0.46 -1.0 98,639 + GFF86 0.70 -1.4 98,639 + GFF86 0.70 -2.5 98,640 - GFF86 0.70 -0.8 98,640 - GFF86 0.70 -1.2 98,640 - GFF86 0.70 -0.8 98,643 + GFF86 0.71 -0.6 98,644 - GFF86 0.71 +0.3 98,654 - GFF86 0.73 -0.8 98,660 + GFF86 0.75 -1.3 98,660 + GFF86 0.75 -2.3 98,661 - GFF86 0.75 -0.1 98,661 - GFF86 0.75 +0.7 98,750 + +0.2 98,750 + -0.8 98,750 + +0.0 98,750 + +0.6 98,750 + -0.6 98,751 - +0.3 98,751 - -1.0 98,751 - -0.4 98,751 - +0.0 98,751 - -1.6 98,751 - -1.3 98,751 - +2.0 98,758 + -1.3 98,830 + -1.3 98,831 - -0.2 98,834 + -0.1 98,834 + -0.4 98,834 + +1.0 98,834 + -0.9 98,834 + +0.7 98,835 - +0.8 98,835 - +0.3 98,835 - +0.0 98,835 - -0.2 98,835 - +0.3 98,835 - -0.2 99,214 - -0.4 99,214 - +0.5 99,214 - +0.0 99,214 - -0.1 99,246 - -0.9 99,251 - -1.7 99,251 - -0.5 99,251 - -0.6 99,291 - -1.0 99,305 - -0.3 99,309 - -1.3 99,309 - -1.6 99,309 - -3.1 99,309 - -0.9 99,313 - -0.9 99,319 + +0.0 99,331 + +0.0 99,331 + +0.0 99,332 - -1.0 99,332 - +1.0 99,332 - +0.0 99,332 - -2.2 99,332 - +0.0 99,334 + -2.0 99,334 + -1.2 99,334 + -1.3 99,335 - -1.0 99,335 - -1.0 99,335 - +0.3 99,388 + GFF88 0.13 -0.6 99,389 - GFF88 0.14 +0.6 99,408 - GFF88 0.17 -1.6 99,502 - GFF88 0.31 +0.0 99,565 + GFF88 0.41 -0.3 99,634 + GFF88 0.52 -1.6 99,635 - GFF88 0.52 +0.6 99,635 - GFF88 0.52 -0.7 99,635 - GFF88 0.52 -1.0 99,771 + GFF88 0.74 +0.0 99,771 + GFF88 0.74 -1.3 99,772 - GFF88 0.74 +0.0 99,772 - GFF88 0.74 -2.0 99,772 - GFF88 0.74 +0.0 99,773 + GFF88 0.74 -0.3 99,781 - GFF88 0.76 -0.3 99,981 - +0.0 100,047 + GFF89 0.20 -1.6 100,048 - GFF89 0.20 -0.2 100,346 - GFF89 0.80 -1.3 100,380 - GFF89 0.86 +0.0 100,380 - GFF89 0.86 +0.6 100,408 - -0.6 100,408 - -0.6 100,440 + +0.3 100,441 - -1.3 100,448 + +1.4 100,448 + +0.0 100,459 - -0.7 100,463 - +1.0 100,524 + GFF90 0.15 -1.3 100,525 - GFF90 0.15 -0.6 100,583 - GFF90 0.29 +0.0 100,583 - GFF90 0.29 +0.5 100,583 - GFF90 0.29 -1.0 100,587 - GFF90 0.30 -0.5 100,587 - GFF90 0.30 -1.6 100,587 - GFF90 0.30 +0.0 100,689 - GFF90 0.55 -1.0 100,844 + -0.7 100,845 - -1.2 100,845 - -1.3 100,902 - +0.2 100,902 - +0.3 100,930 + -0.3 100,931 - -0.9 100,931 - +0.4 100,931 - -0.6 100,931 - -1.0 100,932 + -0.2 100,933 - -0.6 100,933 - +1.0 100,933 - +1.0 100,933 - -2.2
Or see this region's nucleotide sequence