Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF861 and GFF862 are separated by 71 nucleotides GFF862 and GFF863 overlap by 1 nucleotides GFF863 and GFF864 are separated by 18 nucleotides
GFF861 - Ribonuclease G, at 97,140 to 98,612
GFF861
GFF862 - hypothetical protein, at 98,684 to 99,232
GFF862
GFF863 - Pyrroline-5-carboxylate reductase, at 99,232 to 100,062
GFF863
GFF864 - Pyridoxal phosphate homeostasis protein, at 100,081 to 100,785
GFF864
Position (kb) 98
99
100 Strain fitness (log2 ratio) -2
-1
0
1 at 97.701 kb on + strand, within GFF861 at 97.701 kb on + strand, within GFF861 at 97.702 kb on - strand, within GFF861 at 97.702 kb on - strand, within GFF861 at 97.702 kb on - strand, within GFF861 at 97.702 kb on - strand, within GFF861 at 97.702 kb on - strand, within GFF861 at 97.884 kb on + strand, within GFF861 at 97.885 kb on - strand, within GFF861 at 97.947 kb on + strand, within GFF861 at 97.947 kb on + strand, within GFF861 at 98.057 kb on + strand, within GFF861 at 98.078 kb on + strand, within GFF861 at 98.078 kb on + strand, within GFF861 at 98.143 kb on + strand, within GFF861 at 98.143 kb on + strand, within GFF861 at 98.171 kb on + strand, within GFF861 at 98.171 kb on + strand, within GFF861 at 98.172 kb on - strand, within GFF861 at 98.189 kb on + strand, within GFF861 at 98.264 kb on + strand, within GFF861 at 98.265 kb on - strand, within GFF861 at 98.265 kb on - strand, within GFF861 at 98.339 kb on - strand, within GFF861 at 98.339 kb on - strand, within GFF861 at 98.339 kb on - strand, within GFF861 at 98.403 kb on + strand, within GFF861 at 98.492 kb on + strand at 98.492 kb on + strand at 98.493 kb on - strand at 98.493 kb on - strand at 98.578 kb on - strand at 98.598 kb on - strand at 98.645 kb on + strand at 98.645 kb on + strand at 98.645 kb on + strand at 98.646 kb on - strand at 98.646 kb on - strand at 98.676 kb on + strand at 98.676 kb on + strand at 98.685 kb on + strand at 98.686 kb on - strand at 98.686 kb on - strand at 98.795 kb on - strand, within GFF862 at 98.842 kb on - strand, within GFF862 at 98.853 kb on + strand, within GFF862 at 98.854 kb on - strand, within GFF862 at 98.871 kb on - strand, within GFF862 at 98.999 kb on + strand, within GFF862 at 99.000 kb on - strand, within GFF862 at 99.000 kb on - strand, within GFF862 at 99.011 kb on + strand, within GFF862 at 99.012 kb on - strand, within GFF862 at 99.012 kb on - strand, within GFF862 at 99.038 kb on + strand, within GFF862 at 99.038 kb on + strand, within GFF862 at 99.039 kb on - strand, within GFF862 at 99.088 kb on + strand, within GFF862 at 99.167 kb on + strand, within GFF862 at 99.168 kb on - strand, within GFF862 at 99.233 kb on + strand at 99.233 kb on + strand at 99.233 kb on + strand at 99.234 kb on - strand at 99.234 kb on - strand at 99.234 kb on - strand at 99.234 kb on - strand at 100.202 kb on + strand, within GFF864 at 100.204 kb on - strand, within GFF864
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 97,701 + GFF861 0.38 -0.6 97,701 + GFF861 0.38 -1.0 97,702 - GFF861 0.38 +0.0 97,702 - GFF861 0.38 -1.6 97,702 - GFF861 0.38 -0.7 97,702 - GFF861 0.38 -0.9 97,702 - GFF861 0.38 -0.0 97,884 + GFF861 0.51 +0.2 97,885 - GFF861 0.51 -0.4 97,947 + GFF861 0.55 +0.5 97,947 + GFF861 0.55 -0.6 98,057 + GFF861 0.62 +1.0 98,078 + GFF861 0.64 -0.4 98,078 + GFF861 0.64 -1.0 98,143 + GFF861 0.68 -0.0 98,143 + GFF861 0.68 +1.0 98,171 + GFF861 0.70 +0.1 98,171 + GFF861 0.70 -1.8 98,172 - GFF861 0.70 +0.6 98,189 + GFF861 0.71 -1.6 98,264 + GFF861 0.76 +0.1 98,265 - GFF861 0.76 -1.6 98,265 - GFF861 0.76 -0.0 98,339 - GFF861 0.81 -1.0 98,339 - GFF861 0.81 -0.2 98,339 - GFF861 0.81 +0.7 98,403 + GFF861 0.86 -0.6 98,492 + +0.2 98,492 + -0.1 98,493 - -1.6 98,493 - -1.1 98,578 - -0.4 98,598 - -0.7 98,645 + -0.5 98,645 + -0.0 98,645 + +0.2 98,646 - +0.2 98,646 - -0.0 98,676 + -0.3 98,676 + +1.0 98,685 + -0.8 98,686 - -0.3 98,686 - -1.6 98,795 - GFF862 0.20 +0.7 98,842 - GFF862 0.29 +1.0 98,853 + GFF862 0.31 -0.4 98,854 - GFF862 0.31 +1.0 98,871 - GFF862 0.34 -0.6 98,999 + GFF862 0.57 -2.0 99,000 - GFF862 0.58 -0.1 99,000 - GFF862 0.58 +0.5 99,011 + GFF862 0.60 -1.0 99,012 - GFF862 0.60 +1.2 99,012 - GFF862 0.60 -1.4 99,038 + GFF862 0.64 -0.4 99,038 + GFF862 0.64 -1.4 99,039 - GFF862 0.65 +1.0 99,088 + GFF862 0.74 -0.9 99,167 + GFF862 0.88 -1.6 99,168 - GFF862 0.88 -0.3 99,233 + -0.4 99,233 + +1.0 99,233 + -1.0 99,234 - +0.4 99,234 - -1.1 99,234 - -0.6 99,234 - -0.7 100,202 + GFF864 0.17 -0.0 100,204 - GFF864 0.17 -1.8
Or see this region's nucleotide sequence