Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF794 and GFF795 are separated by 120 nucleotides GFF795 and GFF796 are separated by 74 nucleotides
GFF794 - Transcriptional activator protein NhaR, at 32,227 to 33,120
GFF794
GFF795 - hypothetical protein, at 33,241 to 33,456
GFF795
GFF796 - NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic, at 33,531 to 35,066
GFF796
Position (kb) 33
34 Strain fitness (log2 ratio) -2
-1
0
1
2 at 32.249 kb on - strand at 32.426 kb on - strand, within GFF794 at 32.476 kb on + strand, within GFF794 at 32.477 kb on - strand, within GFF794 at 32.477 kb on - strand, within GFF794 at 32.477 kb on - strand, within GFF794 at 32.549 kb on + strand, within GFF794 at 32.549 kb on + strand, within GFF794 at 32.549 kb on + strand, within GFF794 at 32.550 kb on - strand, within GFF794 at 32.558 kb on + strand, within GFF794 at 32.558 kb on + strand, within GFF794 at 32.558 kb on + strand, within GFF794 at 32.558 kb on + strand, within GFF794 at 32.558 kb on + strand, within GFF794 at 32.559 kb on - strand, within GFF794 at 32.635 kb on - strand, within GFF794 at 32.635 kb on - strand, within GFF794 at 32.635 kb on - strand, within GFF794 at 32.656 kb on - strand, within GFF794 at 32.656 kb on - strand, within GFF794 at 32.693 kb on - strand, within GFF794 at 32.774 kb on - strand, within GFF794 at 32.814 kb on + strand, within GFF794 at 32.856 kb on + strand, within GFF794 at 32.857 kb on - strand, within GFF794 at 32.885 kb on - strand, within GFF794 at 32.885 kb on - strand, within GFF794 at 32.885 kb on - strand, within GFF794 at 32.928 kb on + strand, within GFF794 at 33.034 kb on - strand at 33.034 kb on - strand at 33.034 kb on - strand at 33.090 kb on - strand at 33.104 kb on + strand at 33.104 kb on + strand at 33.104 kb on + strand at 33.105 kb on - strand at 33.121 kb on - strand at 33.218 kb on - strand at 33.219 kb on + strand at 33.219 kb on + strand at 33.220 kb on - strand at 33.220 kb on - strand at 33.220 kb on - strand at 33.220 kb on - strand at 33.220 kb on - strand at 33.223 kb on + strand at 33.223 kb on + strand at 33.223 kb on + strand at 33.224 kb on - strand at 33.224 kb on - strand at 33.227 kb on + strand at 33.227 kb on + strand at 33.228 kb on - strand at 33.228 kb on - strand at 33.302 kb on + strand, within GFF795 at 33.347 kb on + strand, within GFF795 at 33.371 kb on + strand, within GFF795 at 33.445 kb on - strand at 33.461 kb on + strand at 33.471 kb on + strand at 33.504 kb on - strand at 33.601 kb on + strand at 33.601 kb on + strand at 33.602 kb on - strand at 33.605 kb on - strand at 33.638 kb on + strand at 33.674 kb on + strand at 33.674 kb on + strand at 33.674 kb on + strand at 33.674 kb on + strand at 33.675 kb on - strand at 33.675 kb on - strand at 33.822 kb on + strand, within GFF796 at 33.822 kb on + strand, within GFF796 at 33.823 kb on - strand, within GFF796 at 33.865 kb on + strand, within GFF796 at 33.866 kb on - strand, within GFF796 at 33.866 kb on - strand, within GFF796 at 34.118 kb on + strand, within GFF796 at 34.145 kb on + strand, within GFF796 at 34.145 kb on + strand, within GFF796 at 34.146 kb on - strand, within GFF796 at 34.195 kb on + strand, within GFF796 at 34.195 kb on + strand, within GFF796 at 34.196 kb on - strand, within GFF796 at 34.258 kb on + strand, within GFF796 at 34.259 kb on - strand, within GFF796 at 34.259 kb on - strand, within GFF796 at 34.259 kb on - strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.342 kb on + strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796 at 34.343 kb on - strand, within GFF796
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 32,249 - +0.2 32,426 - GFF794 0.22 -1.7 32,476 + GFF794 0.28 -2.0 32,477 - GFF794 0.28 -1.4 32,477 - GFF794 0.28 +1.0 32,477 - GFF794 0.28 -0.7 32,549 + GFF794 0.36 -0.4 32,549 + GFF794 0.36 -1.0 32,549 + GFF794 0.36 -1.0 32,550 - GFF794 0.36 -0.6 32,558 + GFF794 0.37 +1.0 32,558 + GFF794 0.37 -1.6 32,558 + GFF794 0.37 -1.0 32,558 + GFF794 0.37 +0.4 32,558 + GFF794 0.37 +0.6 32,559 - GFF794 0.37 +0.6 32,635 - GFF794 0.46 -0.4 32,635 - GFF794 0.46 -1.7 32,635 - GFF794 0.46 -0.8 32,656 - GFF794 0.48 +1.4 32,656 - GFF794 0.48 +0.6 32,693 - GFF794 0.52 -1.5 32,774 - GFF794 0.61 -0.2 32,814 + GFF794 0.66 -1.0 32,856 + GFF794 0.70 +1.3 32,857 - GFF794 0.70 -0.7 32,885 - GFF794 0.74 -1.2 32,885 - GFF794 0.74 +0.8 32,885 - GFF794 0.74 -1.3 32,928 + GFF794 0.78 -0.4 33,034 - +0.6 33,034 - -1.0 33,034 - -0.0 33,090 - +0.3 33,104 + -1.0 33,104 + +0.6 33,104 + -0.0 33,105 - -0.4 33,121 - +0.6 33,218 - -0.4 33,219 + -1.0 33,219 + -0.8 33,220 - -0.9 33,220 - -2.6 33,220 - +0.6 33,220 - -0.6 33,220 - -1.2 33,223 + +0.1 33,223 + -0.0 33,223 + -2.0 33,224 - +2.1 33,224 - -1.8 33,227 + -1.2 33,227 + +0.4 33,228 - -0.9 33,228 - -0.6 33,302 + GFF795 0.28 -1.0 33,347 + GFF795 0.49 -0.8 33,371 + GFF795 0.60 -0.5 33,445 - -0.9 33,461 + -0.4 33,471 + -0.5 33,504 - -0.9 33,601 + -0.6 33,601 + -0.0 33,602 - -1.4 33,605 - +0.1 33,638 + -0.0 33,674 + -1.8 33,674 + -1.2 33,674 + -0.0 33,674 + -0.5 33,675 - -0.4 33,675 - -2.6 33,822 + GFF796 0.19 -0.7 33,822 + GFF796 0.19 -0.2 33,823 - GFF796 0.19 -0.3 33,865 + GFF796 0.22 +1.1 33,866 - GFF796 0.22 +0.1 33,866 - GFF796 0.22 -1.0 34,118 + GFF796 0.38 -0.8 34,145 + GFF796 0.40 -1.0 34,145 + GFF796 0.40 -1.6 34,146 - GFF796 0.40 -0.9 34,195 + GFF796 0.43 -0.8 34,195 + GFF796 0.43 +1.0 34,196 - GFF796 0.43 -0.7 34,258 + GFF796 0.47 +0.6 34,259 - GFF796 0.47 -0.1 34,259 - GFF796 0.47 +1.5 34,259 - GFF796 0.47 -0.3 34,342 + GFF796 0.53 -0.4 34,342 + GFF796 0.53 -0.4 34,342 + GFF796 0.53 -0.1 34,342 + GFF796 0.53 -0.0 34,342 + GFF796 0.53 -1.0 34,342 + GFF796 0.53 -1.2 34,342 + GFF796 0.53 -0.2 34,342 + GFF796 0.53 -0.4 34,342 + GFF796 0.53 -0.0 34,342 + GFF796 0.53 -0.3 34,342 + GFF796 0.53 -1.7 34,343 - GFF796 0.53 +0.6 34,343 - GFF796 0.53 +0.1 34,343 - GFF796 0.53 -0.0 34,343 - GFF796 0.53 -0.1 34,343 - GFF796 0.53 +0.1 34,343 - GFF796 0.53 -0.4 34,343 - GFF796 0.53 -0.7 34,343 - GFF796 0.53 -1.0 34,343 - GFF796 0.53 -0.4 34,343 - GFF796 0.53 -0.2 34,343 - GFF796 0.53 +0.2
Or see this region's nucleotide sequence