Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF683 and GFF684 are separated by 264 nucleotides GFF684 and GFF685 are separated by 351 nucleotides
GFF683 - tRNA dimethylallyltransferase, at 759,708 to 760,661
GFF683
GFF684 - hypothetical protein, at 760,926 to 762,329
GFF684
GFF685 - hypothetical protein, at 762,681 to 763,826
GFF685
Position (kb) 760
761
762
763 Strain fitness (log2 ratio) -2
-1
0
1 at 760.039 kb on - strand, within GFF683 at 760.162 kb on + strand, within GFF683 at 760.162 kb on + strand, within GFF683 at 760.162 kb on + strand, within GFF683 at 760.163 kb on - strand, within GFF683 at 760.163 kb on - strand, within GFF683 at 760.163 kb on - strand, within GFF683 at 760.163 kb on - strand, within GFF683 at 760.230 kb on + strand, within GFF683 at 760.388 kb on + strand, within GFF683 at 760.419 kb on + strand, within GFF683 at 760.530 kb on + strand, within GFF683 at 760.531 kb on - strand, within GFF683 at 760.570 kb on + strand at 760.571 kb on - strand at 760.577 kb on + strand at 760.588 kb on + strand at 760.588 kb on + strand at 760.588 kb on + strand at 760.589 kb on - strand at 760.589 kb on - strand at 760.597 kb on + strand at 760.597 kb on + strand at 760.597 kb on + strand at 760.686 kb on + strand at 760.686 kb on + strand at 760.686 kb on + strand at 760.687 kb on - strand at 760.707 kb on + strand at 760.707 kb on + strand at 760.708 kb on - strand at 760.708 kb on - strand at 760.770 kb on - strand at 760.772 kb on + strand at 760.773 kb on - strand at 760.824 kb on + strand at 760.825 kb on - strand at 760.839 kb on + strand at 760.839 kb on + strand at 760.839 kb on + strand at 760.840 kb on - strand at 760.840 kb on - strand at 760.840 kb on - strand at 760.858 kb on + strand at 760.858 kb on + strand at 760.859 kb on - strand at 760.859 kb on - strand at 760.859 kb on - strand at 760.867 kb on - strand at 760.901 kb on - strand at 760.924 kb on + strand at 760.925 kb on - strand at 760.925 kb on - strand at 760.925 kb on - strand at 760.931 kb on - strand at 760.985 kb on + strand at 761.015 kb on - strand at 761.026 kb on + strand at 761.027 kb on - strand at 761.027 kb on - strand at 761.048 kb on + strand at 761.049 kb on - strand at 761.073 kb on - strand, within GFF684 at 761.130 kb on - strand, within GFF684 at 761.130 kb on - strand, within GFF684 at 761.132 kb on - strand, within GFF684 at 761.132 kb on - strand, within GFF684 at 761.132 kb on - strand, within GFF684 at 761.351 kb on - strand, within GFF684 at 761.351 kb on - strand, within GFF684 at 761.355 kb on + strand, within GFF684 at 761.355 kb on + strand, within GFF684 at 761.400 kb on - strand, within GFF684 at 761.517 kb on + strand, within GFF684 at 761.518 kb on - strand, within GFF684 at 761.518 kb on - strand, within GFF684 at 761.525 kb on + strand, within GFF684 at 761.548 kb on - strand, within GFF684 at 761.636 kb on + strand, within GFF684 at 761.644 kb on - strand, within GFF684 at 761.697 kb on - strand, within GFF684 at 761.697 kb on - strand, within GFF684 at 761.697 kb on - strand, within GFF684 at 761.699 kb on - strand, within GFF684 at 761.706 kb on - strand, within GFF684 at 761.706 kb on - strand, within GFF684 at 761.710 kb on - strand, within GFF684 at 761.710 kb on - strand, within GFF684 at 761.710 kb on - strand, within GFF684 at 761.725 kb on - strand, within GFF684 at 761.737 kb on - strand, within GFF684 at 761.746 kb on - strand, within GFF684 at 761.751 kb on - strand, within GFF684 at 761.755 kb on - strand, within GFF684 at 761.755 kb on - strand, within GFF684 at 761.819 kb on + strand, within GFF684 at 761.823 kb on - strand, within GFF684 at 761.823 kb on - strand, within GFF684 at 761.826 kb on - strand, within GFF684 at 761.826 kb on - strand, within GFF684 at 761.834 kb on - strand, within GFF684 at 761.837 kb on - strand, within GFF684 at 761.848 kb on - strand, within GFF684 at 761.888 kb on + strand, within GFF684 at 761.975 kb on + strand, within GFF684 at 761.975 kb on + strand, within GFF684 at 761.975 kb on + strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 762.028 kb on + strand, within GFF684 at 762.029 kb on - strand, within GFF684 at 762.040 kb on + strand, within GFF684 at 762.040 kb on + strand, within GFF684 at 762.041 kb on - strand, within GFF684 at 762.055 kb on - strand, within GFF684 at 762.202 kb on + strand at 762.206 kb on + strand at 762.207 kb on - strand at 762.207 kb on - strand at 762.228 kb on + strand at 762.229 kb on - strand at 762.229 kb on - strand at 762.229 kb on - strand at 762.265 kb on + strand at 762.266 kb on - strand at 762.364 kb on + strand at 762.364 kb on + strand at 762.365 kb on - strand at 762.365 kb on - strand at 762.381 kb on + strand at 762.384 kb on - strand at 762.384 kb on - strand at 762.400 kb on + strand at 762.401 kb on - strand at 762.425 kb on + strand at 762.425 kb on + strand at 762.425 kb on + strand at 762.426 kb on - strand at 762.452 kb on - strand at 762.492 kb on + strand at 762.522 kb on + strand at 762.523 kb on - strand at 762.530 kb on - strand at 762.549 kb on + strand at 762.550 kb on - strand at 762.578 kb on + strand at 762.581 kb on + strand at 762.590 kb on + strand at 762.590 kb on + strand at 762.601 kb on + strand at 762.601 kb on + strand at 762.635 kb on - strand at 762.637 kb on + strand at 762.702 kb on + strand at 762.734 kb on + strand at 762.734 kb on + strand at 762.747 kb on - strand at 762.825 kb on + strand, within GFF685 at 762.825 kb on + strand, within GFF685 at 762.826 kb on - strand, within GFF685 at 762.896 kb on + strand, within GFF685 at 762.930 kb on - strand, within GFF685 at 763.035 kb on - strand, within GFF685 at 763.156 kb on + strand, within GFF685 at 763.215 kb on + strand, within GFF685 at 763.230 kb on - strand, within GFF685 at 763.232 kb on + strand, within GFF685 at 763.232 kb on + strand, within GFF685
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 760,039 - GFF683 0.35 -0.3 760,162 + GFF683 0.48 -0.0 760,162 + GFF683 0.48 -1.6 760,162 + GFF683 0.48 -2.2 760,163 - GFF683 0.48 -2.2 760,163 - GFF683 0.48 -1.5 760,163 - GFF683 0.48 -0.0 760,163 - GFF683 0.48 -1.6 760,230 + GFF683 0.55 -0.9 760,388 + GFF683 0.71 -1.0 760,419 + GFF683 0.75 -2.2 760,530 + GFF683 0.86 -1.1 760,531 - GFF683 0.86 -1.0 760,570 + -1.3 760,571 - -1.0 760,577 + -0.9 760,588 + -0.6 760,588 + -1.5 760,588 + -1.0 760,589 - -2.5 760,589 - -1.3 760,597 + -0.4 760,597 + -1.6 760,597 + -0.0 760,686 + -0.4 760,686 + -1.0 760,686 + +0.4 760,687 - +1.4 760,707 + +1.3 760,707 + -0.1 760,708 - +0.3 760,708 - -1.4 760,770 - -0.0 760,772 + +0.7 760,773 - -1.3 760,824 + -0.7 760,825 - -0.8 760,839 + -0.0 760,839 + -0.2 760,839 + -2.3 760,840 - +1.0 760,840 - -1.1 760,840 - +0.3 760,858 + +0.3 760,858 + -0.0 760,859 - +0.6 760,859 - +0.4 760,859 - -1.0 760,867 - -2.2 760,901 - -0.2 760,924 + -2.0 760,925 - +0.3 760,925 - -1.6 760,925 - -0.6 760,931 - +0.3 760,985 + -1.3 761,015 - -0.0 761,026 + +1.0 761,027 - -0.2 761,027 - -0.0 761,048 + -0.6 761,049 - +0.6 761,073 - GFF684 0.10 -0.3 761,130 - GFF684 0.15 -1.0 761,130 - GFF684 0.15 -0.3 761,132 - GFF684 0.15 -1.3 761,132 - GFF684 0.15 -0.6 761,132 - GFF684 0.15 +0.3 761,351 - GFF684 0.30 -0.0 761,351 - GFF684 0.30 -1.0 761,355 + GFF684 0.31 -1.3 761,355 + GFF684 0.31 -1.0 761,400 - GFF684 0.34 -0.7 761,517 + GFF684 0.42 -1.0 761,518 - GFF684 0.42 -0.8 761,518 - GFF684 0.42 -1.2 761,525 + GFF684 0.43 +1.0 761,548 - GFF684 0.44 +1.0 761,636 + GFF684 0.51 -1.0 761,644 - GFF684 0.51 -0.6 761,697 - GFF684 0.55 -0.0 761,697 - GFF684 0.55 +0.3 761,697 - GFF684 0.55 -1.3 761,699 - GFF684 0.55 -0.0 761,706 - GFF684 0.56 +0.6 761,706 - GFF684 0.56 -0.3 761,710 - GFF684 0.56 -1.0 761,710 - GFF684 0.56 -0.8 761,710 - GFF684 0.56 -0.0 761,725 - GFF684 0.57 +0.6 761,737 - GFF684 0.58 -1.0 761,746 - GFF684 0.58 -0.0 761,751 - GFF684 0.59 +0.6 761,755 - GFF684 0.59 -0.0 761,755 - GFF684 0.59 -0.0 761,819 + GFF684 0.64 -0.6 761,823 - GFF684 0.64 -2.5 761,823 - GFF684 0.64 -1.0 761,826 - GFF684 0.64 -0.1 761,826 - GFF684 0.64 -0.6 761,834 - GFF684 0.65 -0.1 761,837 - GFF684 0.65 -1.6 761,848 - GFF684 0.66 -1.3 761,888 + GFF684 0.69 -1.8 761,975 + GFF684 0.75 +0.3 761,975 + GFF684 0.75 -1.0 761,975 + GFF684 0.75 -1.0 761,976 - GFF684 0.75 +0.3 761,976 - GFF684 0.75 -1.0 761,976 - GFF684 0.75 -0.3 761,976 - GFF684 0.75 -0.3 761,976 - GFF684 0.75 -0.0 762,028 + GFF684 0.78 -1.3 762,029 - GFF684 0.79 -1.0 762,040 + GFF684 0.79 -1.6 762,040 + GFF684 0.79 -1.0 762,041 - GFF684 0.79 -0.2 762,055 - GFF684 0.80 +0.1 762,202 + -1.6 762,206 + -0.8 762,207 - -1.6 762,207 - -0.6 762,228 + -1.3 762,229 - -0.0 762,229 - -1.0 762,229 - -0.0 762,265 + -1.0 762,266 - -0.0 762,364 + -0.3 762,364 + -0.0 762,365 - -1.5 762,365 - +0.1 762,381 + -1.2 762,384 - -1.0 762,384 - -2.5 762,400 + -0.0 762,401 - -2.0 762,425 + +0.2 762,425 + -1.2 762,425 + -0.6 762,426 - +0.2 762,452 - +0.3 762,492 + -0.6 762,522 + -1.0 762,523 - +0.3 762,530 - -2.0 762,549 + -1.0 762,550 - -0.0 762,578 + +0.8 762,581 + -2.0 762,590 + -2.6 762,590 + +0.6 762,601 + -0.7 762,601 + -1.1 762,635 - -1.6 762,637 + -1.3 762,702 + -1.0 762,734 + -1.3 762,734 + -0.0 762,747 - -1.0 762,825 + GFF685 0.13 -1.0 762,825 + GFF685 0.13 -0.3 762,826 - GFF685 0.13 -1.6 762,896 + GFF685 0.19 -0.0 762,930 - GFF685 0.22 -1.0 763,035 - GFF685 0.31 -0.3 763,156 + GFF685 0.41 -1.8 763,215 + GFF685 0.47 +0.3 763,230 - GFF685 0.48 -1.3 763,232 + GFF685 0.48 -0.8 763,232 + GFF685 0.48 -0.6
Or see this region's nucleotide sequence