Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF613 and GFF614 are separated by 179 nucleotides GFF614 and GFF615 are separated by 123 nucleotides GFF615 and GFF616 are separated by 8 nucleotides
GFF613 - Aminomethyltransferase, at 678,427 to 680,751
GFF613
GFF614 - hypothetical protein, at 680,931 to 681,347
GFF614
GFF615 - Peroxide operon regulator, at 681,471 to 681,944
GFF615
GFF616 - Protein adenylyltransferase SelO, at 681,953 to 683,539
GFF616
Position (kb) 681
682 Strain fitness (log2 ratio) -2
-1
0
1
2 at 680.486 kb on + strand, within GFF613 at 680.540 kb on - strand at 680.578 kb on - strand at 680.578 kb on - strand at 680.578 kb on - strand at 680.581 kb on + strand at 680.582 kb on - strand at 680.582 kb on - strand at 680.642 kb on + strand at 680.643 kb on - strand at 680.660 kb on + strand at 680.661 kb on - strand at 680.661 kb on - strand at 680.661 kb on - strand at 680.664 kb on + strand at 680.665 kb on - strand at 680.719 kb on + strand at 680.727 kb on + strand at 680.742 kb on - strand at 680.765 kb on + strand at 680.765 kb on + strand at 680.765 kb on + strand at 680.766 kb on - strand at 680.766 kb on - strand at 680.766 kb on - strand at 680.766 kb on - strand at 680.766 kb on - strand at 680.766 kb on - strand at 680.766 kb on - strand at 680.766 kb on - strand at 680.767 kb on + strand at 680.767 kb on + strand at 680.767 kb on + strand at 680.767 kb on + strand at 680.767 kb on + strand at 680.767 kb on + strand at 680.767 kb on + strand at 680.767 kb on + strand at 680.767 kb on + strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.768 kb on - strand at 680.781 kb on + strand at 680.782 kb on - strand at 680.782 kb on - strand at 680.782 kb on - strand at 680.782 kb on - strand at 680.792 kb on - strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.842 kb on + strand at 680.843 kb on - strand at 680.843 kb on - strand at 680.843 kb on - strand at 680.843 kb on - strand at 680.843 kb on - strand at 680.843 kb on - strand at 680.843 kb on - strand at 680.843 kb on - strand at 680.843 kb on - strand at 680.878 kb on - strand at 680.884 kb on + strand at 680.884 kb on + strand at 680.884 kb on + strand at 680.884 kb on + strand at 680.884 kb on + strand at 680.885 kb on - strand at 680.910 kb on - strand at 680.910 kb on - strand at 680.910 kb on - strand at 680.910 kb on - strand at 680.933 kb on - strand at 680.963 kb on + strand at 680.964 kb on - strand at 680.964 kb on - strand at 680.964 kb on - strand at 681.036 kb on - strand, within GFF614 at 681.048 kb on + strand, within GFF614 at 681.048 kb on + strand, within GFF614 at 681.048 kb on + strand, within GFF614 at 681.048 kb on + strand, within GFF614 at 681.048 kb on + strand, within GFF614 at 681.048 kb on + strand, within GFF614 at 681.049 kb on - strand, within GFF614 at 681.051 kb on + strand, within GFF614 at 681.052 kb on - strand, within GFF614 at 681.101 kb on - strand, within GFF614 at 681.101 kb on - strand, within GFF614 at 681.101 kb on - strand, within GFF614 at 681.238 kb on - strand, within GFF614 at 681.238 kb on - strand, within GFF614 at 681.239 kb on + strand, within GFF614 at 681.239 kb on + strand, within GFF614 at 681.239 kb on + strand, within GFF614 at 681.240 kb on - strand, within GFF614 at 681.240 kb on - strand, within GFF614 at 681.311 kb on - strand at 681.311 kb on - strand at 681.313 kb on + strand at 681.313 kb on + strand at 681.314 kb on - strand at 681.333 kb on - strand at 681.352 kb on + strand at 681.353 kb on - strand at 681.374 kb on - strand at 681.378 kb on + strand at 681.378 kb on + strand at 681.379 kb on - strand at 681.393 kb on - strand at 681.413 kb on + strand at 681.413 kb on + strand at 681.413 kb on + strand at 681.413 kb on + strand at 681.414 kb on - strand at 681.414 kb on - strand at 681.414 kb on - strand at 681.414 kb on - strand at 681.414 kb on - strand at 681.414 kb on - strand at 681.414 kb on - strand at 681.414 kb on - strand at 681.457 kb on - strand at 681.527 kb on + strand, within GFF615 at 681.528 kb on - strand, within GFF615 at 681.537 kb on - strand, within GFF615 at 681.550 kb on + strand, within GFF615 at 681.550 kb on + strand, within GFF615 at 681.551 kb on - strand, within GFF615 at 681.551 kb on - strand, within GFF615 at 681.551 kb on - strand, within GFF615 at 681.576 kb on - strand, within GFF615 at 681.594 kb on + strand, within GFF615 at 681.594 kb on + strand, within GFF615 at 681.594 kb on + strand, within GFF615 at 681.594 kb on + strand, within GFF615 at 681.595 kb on - strand, within GFF615 at 681.651 kb on - strand, within GFF615 at 681.713 kb on - strand, within GFF615 at 681.784 kb on + strand, within GFF615 at 681.819 kb on + strand, within GFF615 at 681.819 kb on + strand, within GFF615 at 681.919 kb on - strand at 681.919 kb on - strand at 681.919 kb on - strand at 681.919 kb on - strand at 681.955 kb on - strand at 681.961 kb on + strand at 681.962 kb on - strand at 681.962 kb on - strand at 682.045 kb on + strand at 682.046 kb on - strand at 682.046 kb on - strand at 682.046 kb on - strand at 682.046 kb on - strand at 682.047 kb on + strand at 682.047 kb on + strand at 682.048 kb on - strand at 682.061 kb on + strand at 682.061 kb on + strand at 682.062 kb on - strand at 682.062 kb on - strand at 682.107 kb on - strand at 682.132 kb on - strand, within GFF616 at 682.146 kb on + strand, within GFF616 at 682.146 kb on + strand, within GFF616 at 682.146 kb on + strand, within GFF616 at 682.147 kb on - strand, within GFF616 at 682.147 kb on - strand, within GFF616 at 682.187 kb on + strand, within GFF616 at 682.188 kb on - strand, within GFF616 at 682.188 kb on - strand, within GFF616 at 682.221 kb on + strand, within GFF616 at 682.470 kb on + strand, within GFF616 at 682.470 kb on + strand, within GFF616 at 682.471 kb on - strand, within GFF616 at 682.471 kb on - strand, within GFF616 at 682.471 kb on - strand, within GFF616 at 682.482 kb on + strand, within GFF616 at 682.482 kb on + strand, within GFF616 at 682.482 kb on + strand, within GFF616 at 682.483 kb on - strand, within GFF616 at 682.483 kb on - strand, within GFF616 at 682.483 kb on - strand, within GFF616 at 682.483 kb on - strand, within GFF616 at 682.483 kb on - strand, within GFF616 at 682.521 kb on - strand, within GFF616 at 682.521 kb on - strand, within GFF616 at 682.521 kb on - strand, within GFF616 at 682.645 kb on + strand, within GFF616 at 682.646 kb on - strand, within GFF616 at 682.646 kb on - strand, within GFF616 at 682.646 kb on - strand, within GFF616 at 682.649 kb on + strand, within GFF616 at 682.649 kb on + strand, within GFF616 at 682.650 kb on - strand, within GFF616 at 682.660 kb on - strand, within GFF616 at 682.669 kb on - strand, within GFF616 at 682.673 kb on + strand, within GFF616 at 682.673 kb on + strand, within GFF616 at 682.674 kb on - strand, within GFF616 at 682.674 kb on - strand, within GFF616 at 682.674 kb on - strand, within GFF616 at 682.674 kb on - strand, within GFF616 at 682.674 kb on - strand, within GFF616 at 682.691 kb on - strand, within GFF616 at 682.691 kb on - strand, within GFF616 at 682.696 kb on + strand, within GFF616 at 682.696 kb on + strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616 at 682.697 kb on - strand, within GFF616
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 680,486 + GFF613 0.89 +0.3 680,540 - -0.5 680,578 - -0.1 680,578 - -0.4 680,578 - -1.0 680,581 + -0.8 680,582 - -0.7 680,582 - +0.6 680,642 + -1.2 680,643 - -2.3 680,660 + -0.2 680,661 - -1.6 680,661 - +0.6 680,661 - -0.3 680,664 + -1.0 680,665 - -1.3 680,719 + -0.0 680,727 + -0.4 680,742 - -2.6 680,765 + -0.7 680,765 + +0.1 680,765 + -2.2 680,766 - -1.0 680,766 - +0.8 680,766 - -1.3 680,766 - -0.9 680,766 - +0.2 680,766 - -2.2 680,766 - -0.7 680,766 - -1.0 680,767 + -2.5 680,767 + +0.3 680,767 + +0.7 680,767 + +0.8 680,767 + -1.3 680,767 + -0.1 680,767 + -1.1 680,767 + -0.1 680,767 + -0.0 680,768 - +0.4 680,768 - -0.3 680,768 - +0.4 680,768 - +1.0 680,768 - +0.6 680,768 - -1.2 680,768 - -0.0 680,768 - +1.2 680,768 - -1.6 680,768 - +0.6 680,768 - -0.6 680,768 - -0.2 680,768 - -0.3 680,781 + -0.6 680,782 - -0.0 680,782 - -0.3 680,782 - -0.1 680,782 - -1.6 680,792 - +0.2 680,842 + -0.2 680,842 + +1.0 680,842 + -1.3 680,842 + -1.1 680,842 + -0.4 680,842 + -0.9 680,842 + +0.4 680,842 + -1.0 680,842 + -0.7 680,842 + -1.0 680,842 + -1.0 680,843 - -0.2 680,843 - +0.7 680,843 - -1.4 680,843 - -1.3 680,843 - -1.2 680,843 - -2.0 680,843 - -1.3 680,843 - +0.4 680,843 - -1.3 680,878 - -1.0 680,884 + +0.1 680,884 + +0.1 680,884 + +0.3 680,884 + -2.2 680,884 + -0.6 680,885 - +0.4 680,910 - +0.5 680,910 - +0.2 680,910 - +0.2 680,910 - -0.0 680,933 - -1.6 680,963 + -0.3 680,964 - -0.9 680,964 - +1.6 680,964 - +0.3 681,036 - GFF614 0.25 -0.7 681,048 + GFF614 0.28 +1.8 681,048 + GFF614 0.28 -0.0 681,048 + GFF614 0.28 -2.2 681,048 + GFF614 0.28 -1.2 681,048 + GFF614 0.28 -0.8 681,048 + GFF614 0.28 +0.4 681,049 - GFF614 0.28 -2.6 681,051 + GFF614 0.29 -1.3 681,052 - GFF614 0.29 -0.0 681,101 - GFF614 0.41 -0.9 681,101 - GFF614 0.41 -1.2 681,101 - GFF614 0.41 -0.1 681,238 - GFF614 0.74 +0.7 681,238 - GFF614 0.74 -0.9 681,239 + GFF614 0.74 -1.0 681,239 + GFF614 0.74 -0.0 681,239 + GFF614 0.74 -0.2 681,240 - GFF614 0.74 -0.0 681,240 - GFF614 0.74 -0.0 681,311 - -1.6 681,311 - +0.2 681,313 + -1.2 681,313 + -0.9 681,314 - -0.0 681,333 - -0.0 681,352 + +1.3 681,353 - -0.2 681,374 - +0.1 681,378 + -1.0 681,378 + -0.6 681,379 - +0.5 681,393 - -1.3 681,413 + -0.8 681,413 + -1.3 681,413 + +0.6 681,413 + -1.0 681,414 - +0.3 681,414 - -0.5 681,414 - -0.0 681,414 - +0.1 681,414 - -0.6 681,414 - -0.1 681,414 - -1.6 681,414 - -0.0 681,457 - -0.2 681,527 + GFF615 0.12 +0.6 681,528 - GFF615 0.12 -0.3 681,537 - GFF615 0.14 -1.0 681,550 + GFF615 0.17 -1.6 681,550 + GFF615 0.17 -1.3 681,551 - GFF615 0.17 -0.8 681,551 - GFF615 0.17 -1.3 681,551 - GFF615 0.17 -0.4 681,576 - GFF615 0.22 -1.0 681,594 + GFF615 0.26 -1.6 681,594 + GFF615 0.26 -0.8 681,594 + GFF615 0.26 -0.0 681,594 + GFF615 0.26 -1.2 681,595 - GFF615 0.26 -1.0 681,651 - GFF615 0.38 -2.2 681,713 - GFF615 0.51 -1.3 681,784 + GFF615 0.66 -0.0 681,819 + GFF615 0.73 -1.0 681,819 + GFF615 0.73 -0.0 681,919 - -1.6 681,919 - -1.3 681,919 - -0.6 681,919 - +0.4 681,955 - -0.0 681,961 + -0.0 681,962 - -1.9 681,962 - +0.7 682,045 + +0.3 682,046 - +1.0 682,046 - +0.6 682,046 - +0.1 682,046 - -0.7 682,047 + -0.0 682,047 + +0.2 682,048 - +0.2 682,061 + -0.9 682,061 + -0.5 682,062 - -0.3 682,062 - +0.4 682,107 - -0.0 682,132 - GFF616 0.11 -0.2 682,146 + GFF616 0.12 -0.1 682,146 + GFF616 0.12 -0.0 682,146 + GFF616 0.12 -0.8 682,147 - GFF616 0.12 +0.1 682,147 - GFF616 0.12 -0.0 682,187 + GFF616 0.15 -1.6 682,188 - GFF616 0.15 +0.1 682,188 - GFF616 0.15 -0.2 682,221 + GFF616 0.17 -0.2 682,470 + GFF616 0.33 -0.6 682,470 + GFF616 0.33 -0.8 682,471 - GFF616 0.33 +0.3 682,471 - GFF616 0.33 -0.4 682,471 - GFF616 0.33 -0.2 682,482 + GFF616 0.33 -0.0 682,482 + GFF616 0.33 -1.7 682,482 + GFF616 0.33 +0.6 682,483 - GFF616 0.33 -0.5 682,483 - GFF616 0.33 -1.5 682,483 - GFF616 0.33 -0.3 682,483 - GFF616 0.33 -0.6 682,483 - GFF616 0.33 -0.1 682,521 - GFF616 0.36 -0.4 682,521 - GFF616 0.36 -1.3 682,521 - GFF616 0.36 +0.1 682,645 + GFF616 0.44 -0.2 682,646 - GFF616 0.44 -0.3 682,646 - GFF616 0.44 +0.1 682,646 - GFF616 0.44 +0.3 682,649 + GFF616 0.44 -0.2 682,649 + GFF616 0.44 -0.3 682,650 - GFF616 0.44 -0.2 682,660 - GFF616 0.45 +0.2 682,669 - GFF616 0.45 +0.3 682,673 + GFF616 0.45 -0.7 682,673 + GFF616 0.45 -1.0 682,674 - GFF616 0.45 +0.6 682,674 - GFF616 0.45 -0.0 682,674 - GFF616 0.45 -0.9 682,674 - GFF616 0.45 -1.6 682,674 - GFF616 0.45 -0.3 682,691 - GFF616 0.47 -1.9 682,691 - GFF616 0.47 +0.2 682,696 + GFF616 0.47 -1.3 682,696 + GFF616 0.47 -0.6 682,697 - GFF616 0.47 +1.0 682,697 - GFF616 0.47 +0.3 682,697 - GFF616 0.47 +0.6 682,697 - GFF616 0.47 +0.1 682,697 - GFF616 0.47 -1.6 682,697 - GFF616 0.47 -0.2 682,697 - GFF616 0.47 -0.0 682,697 - GFF616 0.47 -0.3 682,697 - GFF616 0.47 -0.0 682,697 - GFF616 0.47 -1.6 682,697 - GFF616 0.47 -1.1
Or see this region's nucleotide sequence