Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF588 and GFF589 are separated by 162 nucleotides GFF589 and GFF590 are separated by 276 nucleotides
GFF588 - Ribosome biogenesis GTPase A, at 648,399 to 649,334
GFF588
GFF589 - hypothetical protein, at 649,497 to 650,579
GFF589
GFF590 - hypothetical protein, at 650,856 to 651,686
GFF590
Position (kb) 649
650
651 Strain fitness (log2 ratio) -2
-1
0
1 at 649.352 kb on - strand at 649.352 kb on - strand at 649.352 kb on - strand at 649.447 kb on - strand at 649.447 kb on - strand at 649.458 kb on + strand at 649.459 kb on - strand at 649.474 kb on - strand at 649.477 kb on + strand at 649.477 kb on + strand at 649.478 kb on - strand at 649.478 kb on - strand at 649.478 kb on - strand at 649.478 kb on - strand at 649.499 kb on - strand at 649.573 kb on + strand at 649.574 kb on - strand at 649.577 kb on + strand at 649.577 kb on + strand at 649.577 kb on + strand at 649.577 kb on + strand at 649.577 kb on + strand at 649.578 kb on - strand at 649.578 kb on - strand at 649.578 kb on - strand at 649.579 kb on + strand at 649.580 kb on - strand at 649.642 kb on + strand, within GFF589 at 649.675 kb on + strand, within GFF589 at 649.676 kb on - strand, within GFF589 at 649.676 kb on - strand, within GFF589 at 649.724 kb on - strand, within GFF589 at 649.732 kb on + strand, within GFF589 at 649.781 kb on - strand, within GFF589 at 649.798 kb on + strand, within GFF589 at 649.799 kb on - strand, within GFF589 at 649.799 kb on - strand, within GFF589 at 649.870 kb on + strand, within GFF589 at 649.871 kb on - strand, within GFF589 at 649.878 kb on - strand, within GFF589 at 649.960 kb on + strand, within GFF589 at 649.983 kb on - strand, within GFF589 at 650.018 kb on - strand, within GFF589 at 650.021 kb on - strand, within GFF589 at 650.038 kb on + strand, within GFF589 at 650.096 kb on + strand, within GFF589 at 650.097 kb on - strand, within GFF589 at 650.102 kb on + strand, within GFF589 at 650.259 kb on - strand, within GFF589 at 650.265 kb on + strand, within GFF589 at 650.312 kb on + strand, within GFF589 at 650.358 kb on - strand, within GFF589 at 650.371 kb on + strand, within GFF589 at 650.372 kb on - strand, within GFF589 at 650.491 kb on - strand at 650.537 kb on - strand at 650.542 kb on - strand at 650.579 kb on + strand at 650.583 kb on + strand at 650.583 kb on + strand at 650.584 kb on - strand at 650.584 kb on - strand at 650.691 kb on + strand at 650.692 kb on - strand at 650.692 kb on - strand at 650.746 kb on + strand at 650.746 kb on + strand at 650.759 kb on + strand at 650.760 kb on - strand at 650.760 kb on - strand at 650.760 kb on - strand at 650.760 kb on - strand at 650.760 kb on - strand at 650.820 kb on - strand at 650.830 kb on - strand at 650.830 kb on - strand at 650.830 kb on - strand at 650.830 kb on - strand at 650.832 kb on + strand at 650.840 kb on + strand at 650.841 kb on - strand at 650.841 kb on - strand at 650.841 kb on - strand at 650.920 kb on + strand at 650.920 kb on + strand at 650.920 kb on + strand at 650.920 kb on + strand at 650.920 kb on + strand at 650.920 kb on + strand at 650.921 kb on - strand at 650.921 kb on - strand at 650.921 kb on - strand at 650.921 kb on - strand at 650.924 kb on + strand at 650.925 kb on - strand at 650.982 kb on + strand, within GFF590 at 650.983 kb on - strand, within GFF590 at 651.075 kb on + strand, within GFF590 at 651.076 kb on - strand, within GFF590 at 651.086 kb on + strand, within GFF590 at 651.086 kb on + strand, within GFF590 at 651.086 kb on + strand, within GFF590 at 651.086 kb on + strand, within GFF590 at 651.086 kb on + strand, within GFF590 at 651.093 kb on + strand, within GFF590 at 651.226 kb on + strand, within GFF590 at 651.269 kb on + strand, within GFF590 at 651.269 kb on + strand, within GFF590 at 651.348 kb on - strand, within GFF590 at 651.352 kb on + strand, within GFF590 at 651.401 kb on + strand, within GFF590 at 651.401 kb on + strand, within GFF590 at 651.401 kb on + strand, within GFF590 at 651.401 kb on + strand, within GFF590 at 651.402 kb on - strand, within GFF590 at 651.416 kb on - strand, within GFF590 at 651.452 kb on + strand, within GFF590 at 651.458 kb on + strand, within GFF590 at 651.458 kb on + strand, within GFF590 at 651.459 kb on - strand, within GFF590 at 651.548 kb on - strand, within GFF590 at 651.564 kb on - strand, within GFF590
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 649,352 - -0.2 649,352 - -0.2 649,352 - -0.0 649,447 - +0.3 649,447 - +0.3 649,458 + -2.3 649,459 - -0.6 649,474 - -0.0 649,477 + +0.1 649,477 + -0.6 649,478 - -1.0 649,478 - -0.1 649,478 - -0.2 649,478 - -0.3 649,499 - +0.5 649,573 + -1.3 649,574 - -1.7 649,577 + -0.0 649,577 + -0.3 649,577 + -1.0 649,577 + -1.3 649,577 + -1.3 649,578 - -1.3 649,578 - -0.0 649,578 - +0.3 649,579 + -1.0 649,580 - -1.3 649,642 + GFF589 0.13 -0.0 649,675 + GFF589 0.16 -1.0 649,676 - GFF589 0.17 -0.0 649,676 - GFF589 0.17 -1.0 649,724 - GFF589 0.21 -1.0 649,732 + GFF589 0.22 -1.3 649,781 - GFF589 0.26 -0.6 649,798 + GFF589 0.28 -1.3 649,799 - GFF589 0.28 -0.0 649,799 - GFF589 0.28 -1.0 649,870 + GFF589 0.34 -0.6 649,871 - GFF589 0.35 -1.3 649,878 - GFF589 0.35 -1.8 649,960 + GFF589 0.43 -1.0 649,983 - GFF589 0.45 -1.3 650,018 - GFF589 0.48 -1.0 650,021 - GFF589 0.48 -1.8 650,038 + GFF589 0.50 -1.0 650,096 + GFF589 0.55 -1.3 650,097 - GFF589 0.55 -2.2 650,102 + GFF589 0.56 -1.0 650,259 - GFF589 0.70 -1.8 650,265 + GFF589 0.71 -1.3 650,312 + GFF589 0.75 -1.0 650,358 - GFF589 0.80 -0.6 650,371 + GFF589 0.81 -1.3 650,372 - GFF589 0.81 -1.0 650,491 - -1.0 650,537 - -1.3 650,542 - -2.2 650,579 + -0.8 650,583 + -0.2 650,583 + -1.6 650,584 - -1.0 650,584 - -1.3 650,691 + -0.6 650,692 - -1.0 650,692 - +0.4 650,746 + -0.0 650,746 + -0.0 650,759 + -0.6 650,760 - +0.4 650,760 - -0.6 650,760 - +1.0 650,760 - -1.0 650,760 - -0.3 650,820 - -1.3 650,830 - +1.0 650,830 - +0.5 650,830 - -0.0 650,830 - -0.0 650,832 + +0.7 650,840 + +0.3 650,841 - -0.6 650,841 - +0.8 650,841 - -0.4 650,920 + -0.4 650,920 + -0.2 650,920 + -0.2 650,920 + -0.2 650,920 + -0.2 650,920 + -0.8 650,921 - -1.0 650,921 - +0.7 650,921 - -0.4 650,921 - -1.0 650,924 + -1.0 650,925 - -0.9 650,982 + GFF590 0.15 -0.9 650,983 - GFF590 0.15 -0.6 651,075 + GFF590 0.26 +0.3 651,076 - GFF590 0.26 -0.3 651,086 + GFF590 0.28 -1.6 651,086 + GFF590 0.28 -0.3 651,086 + GFF590 0.28 -1.2 651,086 + GFF590 0.28 -1.0 651,086 + GFF590 0.28 -0.5 651,093 + GFF590 0.29 -0.3 651,226 + GFF590 0.45 -0.2 651,269 + GFF590 0.50 -1.4 651,269 + GFF590 0.50 +0.6 651,348 - GFF590 0.59 -0.0 651,352 + GFF590 0.60 +0.2 651,401 + GFF590 0.66 -1.6 651,401 + GFF590 0.66 -0.0 651,401 + GFF590 0.66 +0.3 651,401 + GFF590 0.66 -0.0 651,402 - GFF590 0.66 -0.0 651,416 - GFF590 0.67 +0.3 651,452 + GFF590 0.72 +1.0 651,458 + GFF590 0.72 +0.7 651,458 + GFF590 0.72 -0.5 651,459 - GFF590 0.73 +1.3 651,548 - GFF590 0.83 +0.7 651,564 - GFF590 0.85 -1.3
Or see this region's nucleotide sequence