Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF380 and GFF381 are separated by 96 nucleotides GFF381 and GFF382 are separated by 34 nucleotides GFF382 and GFF383 are separated by 218 nucleotides
GFF380 - Metalloprotease TldD, at 417,992 to 419,431
GFF380
GFF381 - Deaminated glutathione amidase, at 419,528 to 420,382
GFF381
GFF382 - hypothetical protein, at 420,417 to 424,268
GFF382
GFF383 - putative ABC transporter ATP-binding protein YheS, at 424,487 to 426,388
GFF383
Position (kb) 420
421
422
423
424
425 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 419.431 kb on + strand at 419.441 kb on - strand at 419.441 kb on - strand at 419.441 kb on - strand at 419.441 kb on - strand at 419.446 kb on - strand at 419.446 kb on - strand at 419.446 kb on - strand at 419.555 kb on - strand at 419.555 kb on - strand at 419.564 kb on + strand at 419.565 kb on - strand at 419.584 kb on + strand at 419.585 kb on - strand at 419.587 kb on + strand at 419.588 kb on - strand at 419.589 kb on + strand at 419.589 kb on + strand at 419.589 kb on + strand at 419.589 kb on + strand at 419.589 kb on + strand at 419.590 kb on - strand at 419.590 kb on - strand at 419.590 kb on - strand at 419.590 kb on - strand at 419.590 kb on - strand at 419.590 kb on - strand at 419.733 kb on + strand, within GFF381 at 419.734 kb on - strand, within GFF381 at 419.734 kb on - strand, within GFF381 at 419.734 kb on - strand, within GFF381 at 419.734 kb on - strand, within GFF381 at 419.734 kb on - strand, within GFF381 at 419.734 kb on - strand, within GFF381 at 419.824 kb on + strand, within GFF381 at 419.825 kb on - strand, within GFF381 at 419.910 kb on - strand, within GFF381 at 419.910 kb on - strand, within GFF381 at 419.955 kb on + strand, within GFF381 at 419.955 kb on + strand, within GFF381 at 420.028 kb on + strand, within GFF381 at 420.030 kb on + strand, within GFF381 at 420.030 kb on + strand, within GFF381 at 420.031 kb on - strand, within GFF381 at 420.031 kb on - strand, within GFF381 at 420.055 kb on + strand, within GFF381 at 420.055 kb on + strand, within GFF381 at 420.143 kb on - strand, within GFF381 at 420.143 kb on - strand, within GFF381 at 420.191 kb on - strand, within GFF381 at 420.211 kb on - strand, within GFF381 at 420.222 kb on - strand, within GFF381 at 420.370 kb on + strand at 420.371 kb on - strand at 420.398 kb on + strand at 420.399 kb on - strand at 420.410 kb on - strand at 420.410 kb on - strand at 420.506 kb on + strand at 420.507 kb on - strand at 420.513 kb on - strand at 420.513 kb on - strand at 420.513 kb on - strand at 420.513 kb on - strand at 420.515 kb on - strand at 420.515 kb on - strand at 420.515 kb on - strand at 420.515 kb on - strand at 420.515 kb on - strand at 420.515 kb on - strand at 420.630 kb on - strand at 420.630 kb on - strand at 420.630 kb on - strand at 420.739 kb on - strand at 420.765 kb on - strand at 420.973 kb on - strand, within GFF382 at 420.973 kb on - strand, within GFF382 at 421.063 kb on - strand, within GFF382 at 421.063 kb on - strand, within GFF382 at 421.245 kb on - strand, within GFF382 at 421.302 kb on - strand, within GFF382 at 421.359 kb on - strand, within GFF382 at 421.411 kb on - strand, within GFF382 at 421.411 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.486 kb on - strand, within GFF382 at 421.507 kb on - strand, within GFF382 at 421.563 kb on - strand, within GFF382 at 421.563 kb on - strand, within GFF382 at 421.733 kb on - strand, within GFF382 at 421.959 kb on - strand, within GFF382 at 422.062 kb on - strand, within GFF382 at 422.062 kb on - strand, within GFF382 at 422.062 kb on - strand, within GFF382 at 422.062 kb on - strand, within GFF382 at 422.062 kb on - strand, within GFF382 at 422.142 kb on - strand, within GFF382 at 422.142 kb on - strand, within GFF382 at 422.221 kb on - strand, within GFF382 at 422.277 kb on - strand, within GFF382 at 422.361 kb on - strand, within GFF382 at 422.361 kb on - strand, within GFF382 at 422.392 kb on - strand, within GFF382 at 422.594 kb on - strand, within GFF382 at 422.594 kb on - strand, within GFF382 at 422.640 kb on - strand, within GFF382 at 422.708 kb on - strand, within GFF382 at 422.708 kb on - strand, within GFF382 at 422.758 kb on - strand, within GFF382 at 422.758 kb on - strand, within GFF382 at 422.758 kb on - strand, within GFF382 at 422.758 kb on - strand, within GFF382 at 422.758 kb on - strand, within GFF382 at 422.789 kb on - strand, within GFF382 at 422.789 kb on - strand, within GFF382 at 422.801 kb on + strand, within GFF382 at 422.802 kb on - strand, within GFF382 at 422.802 kb on - strand, within GFF382 at 422.802 kb on - strand, within GFF382 at 422.802 kb on - strand, within GFF382 at 422.802 kb on - strand, within GFF382 at 422.881 kb on - strand, within GFF382 at 422.881 kb on - strand, within GFF382 at 422.893 kb on - strand, within GFF382 at 422.893 kb on - strand, within GFF382 at 422.923 kb on - strand, within GFF382 at 423.046 kb on - strand, within GFF382 at 423.046 kb on - strand, within GFF382 at 423.046 kb on - strand, within GFF382 at 423.046 kb on - strand, within GFF382 at 423.046 kb on - strand, within GFF382 at 423.046 kb on - strand, within GFF382 at 423.046 kb on - strand, within GFF382 at 423.046 kb on - strand, within GFF382 at 423.098 kb on - strand, within GFF382 at 423.098 kb on - strand, within GFF382 at 423.098 kb on - strand, within GFF382 at 423.364 kb on - strand, within GFF382 at 423.364 kb on - strand, within GFF382 at 423.364 kb on - strand, within GFF382 at 423.460 kb on - strand, within GFF382 at 423.460 kb on - strand, within GFF382 at 423.610 kb on - strand, within GFF382 at 423.610 kb on - strand, within GFF382 at 423.644 kb on + strand, within GFF382 at 423.645 kb on - strand, within GFF382 at 423.645 kb on - strand, within GFF382 at 423.645 kb on - strand, within GFF382 at 423.645 kb on - strand, within GFF382 at 423.645 kb on - strand, within GFF382 at 423.645 kb on - strand, within GFF382 at 423.645 kb on - strand, within GFF382 at 423.645 kb on - strand, within GFF382 at 423.747 kb on - strand, within GFF382 at 423.805 kb on - strand, within GFF382 at 423.933 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.034 kb on - strand at 424.036 kb on - strand at 424.090 kb on - strand at 424.269 kb on - strand at 424.301 kb on - strand at 424.301 kb on - strand at 424.301 kb on - strand at 424.301 kb on - strand at 424.301 kb on - strand at 424.304 kb on + strand at 424.305 kb on - strand at 424.305 kb on - strand at 424.305 kb on - strand at 424.317 kb on - strand at 424.317 kb on - strand at 424.352 kb on + strand at 424.353 kb on - strand at 424.358 kb on + strand at 424.359 kb on - strand at 424.364 kb on - strand at 424.364 kb on - strand at 424.373 kb on + strand at 424.373 kb on + strand at 424.374 kb on - strand at 424.413 kb on + strand at 424.414 kb on - strand at 424.439 kb on + strand at 424.439 kb on + strand at 424.473 kb on - strand at 424.499 kb on - strand at 424.659 kb on + strand at 424.733 kb on + strand, within GFF383 at 424.733 kb on + strand, within GFF383 at 424.774 kb on - strand, within GFF383 at 424.815 kb on + strand, within GFF383 at 424.859 kb on + strand, within GFF383 at 424.860 kb on - strand, within GFF383 at 424.860 kb on - strand, within GFF383 at 424.907 kb on - strand, within GFF383 at 425.146 kb on + strand, within GFF383 at 425.147 kb on - strand, within GFF383 at 425.147 kb on - strand, within GFF383 at 425.237 kb on + strand, within GFF383
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 419,431 + +0.1 419,441 - -0.5 419,441 - -0.0 419,441 - -0.0 419,441 - -0.0 419,446 - -1.7 419,446 - +0.7 419,446 - -0.1 419,555 - -0.0 419,555 - -0.3 419,564 + -0.8 419,565 - +1.3 419,584 + -1.5 419,585 - -1.0 419,587 + +0.2 419,588 - -1.6 419,589 + -1.3 419,589 + +0.2 419,589 + -0.6 419,589 + -1.4 419,589 + -1.6 419,590 - -0.3 419,590 - +1.0 419,590 - -0.5 419,590 - -1.8 419,590 - -0.2 419,590 - -0.0 419,733 + GFF381 0.24 -0.0 419,734 - GFF381 0.24 -0.0 419,734 - GFF381 0.24 -0.8 419,734 - GFF381 0.24 -1.0 419,734 - GFF381 0.24 -0.2 419,734 - GFF381 0.24 -0.4 419,734 - GFF381 0.24 -1.2 419,824 + GFF381 0.35 +0.2 419,825 - GFF381 0.35 -1.3 419,910 - GFF381 0.45 +0.2 419,910 - GFF381 0.45 +0.2 419,955 + GFF381 0.50 -0.3 419,955 + GFF381 0.50 -0.1 420,028 + GFF381 0.58 +0.1 420,030 + GFF381 0.59 -0.8 420,030 + GFF381 0.59 +0.7 420,031 - GFF381 0.59 -1.4 420,031 - GFF381 0.59 -2.0 420,055 + GFF381 0.62 +0.2 420,055 + GFF381 0.62 -0.9 420,143 - GFF381 0.72 -0.8 420,143 - GFF381 0.72 -0.5 420,191 - GFF381 0.78 -1.2 420,211 - GFF381 0.80 +1.9 420,222 - GFF381 0.81 +0.5 420,370 + -0.3 420,371 - -1.4 420,398 + -0.7 420,399 - -1.6 420,410 - -2.2 420,410 - -0.8 420,506 + +1.0 420,507 - -0.2 420,513 - +0.6 420,513 - -1.6 420,513 - -1.0 420,513 - -0.0 420,515 - +0.3 420,515 - -0.9 420,515 - -0.3 420,515 - -0.3 420,515 - -0.2 420,515 - -0.2 420,630 - -0.5 420,630 - -1.8 420,630 - -1.2 420,739 - +0.2 420,765 - -1.6 420,973 - GFF382 0.14 -2.7 420,973 - GFF382 0.14 -1.0 421,063 - GFF382 0.17 -1.0 421,063 - GFF382 0.17 -2.3 421,245 - GFF382 0.21 -1.3 421,302 - GFF382 0.23 -0.2 421,359 - GFF382 0.24 -0.8 421,411 - GFF382 0.26 -0.0 421,411 - GFF382 0.26 -0.8 421,486 - GFF382 0.28 -0.5 421,486 - GFF382 0.28 -0.5 421,486 - GFF382 0.28 -2.6 421,486 - GFF382 0.28 -2.3 421,486 - GFF382 0.28 -1.0 421,486 - GFF382 0.28 -3.0 421,486 - GFF382 0.28 -1.0 421,486 - GFF382 0.28 -2.3 421,486 - GFF382 0.28 -0.3 421,486 - GFF382 0.28 -0.7 421,507 - GFF382 0.28 -0.3 421,563 - GFF382 0.30 -1.6 421,563 - GFF382 0.30 -1.8 421,733 - GFF382 0.34 -1.2 421,959 - GFF382 0.40 +0.2 422,062 - GFF382 0.43 -1.8 422,062 - GFF382 0.43 -0.5 422,062 - GFF382 0.43 -1.1 422,062 - GFF382 0.43 -1.9 422,062 - GFF382 0.43 -1.0 422,142 - GFF382 0.45 -1.8 422,142 - GFF382 0.45 -0.0 422,221 - GFF382 0.47 -1.4 422,277 - GFF382 0.48 -1.0 422,361 - GFF382 0.50 -1.0 422,361 - GFF382 0.50 -0.6 422,392 - GFF382 0.51 -1.6 422,594 - GFF382 0.57 -2.3 422,594 - GFF382 0.57 -0.3 422,640 - GFF382 0.58 -1.0 422,708 - GFF382 0.59 -1.5 422,708 - GFF382 0.59 -0.0 422,758 - GFF382 0.61 +0.1 422,758 - GFF382 0.61 -2.2 422,758 - GFF382 0.61 -2.3 422,758 - GFF382 0.61 -1.3 422,758 - GFF382 0.61 -1.1 422,789 - GFF382 0.62 -0.3 422,789 - GFF382 0.62 -1.0 422,801 + GFF382 0.62 -0.9 422,802 - GFF382 0.62 -1.0 422,802 - GFF382 0.62 -1.0 422,802 - GFF382 0.62 -2.2 422,802 - GFF382 0.62 -1.2 422,802 - GFF382 0.62 -0.6 422,881 - GFF382 0.64 -0.2 422,881 - GFF382 0.64 -0.3 422,893 - GFF382 0.64 -1.3 422,893 - GFF382 0.64 -1.8 422,923 - GFF382 0.65 -1.3 423,046 - GFF382 0.68 -1.7 423,046 - GFF382 0.68 +0.3 423,046 - GFF382 0.68 -1.0 423,046 - GFF382 0.68 -0.6 423,046 - GFF382 0.68 -2.1 423,046 - GFF382 0.68 -1.3 423,046 - GFF382 0.68 +0.2 423,046 - GFF382 0.68 -0.0 423,098 - GFF382 0.70 -2.5 423,098 - GFF382 0.70 +0.6 423,098 - GFF382 0.70 -3.3 423,364 - GFF382 0.77 -1.3 423,364 - GFF382 0.77 -2.0 423,364 - GFF382 0.77 -1.3 423,460 - GFF382 0.79 -2.0 423,460 - GFF382 0.79 -2.3 423,610 - GFF382 0.83 -1.8 423,610 - GFF382 0.83 -1.8 423,644 + GFF382 0.84 -1.3 423,645 - GFF382 0.84 -0.3 423,645 - GFF382 0.84 -1.8 423,645 - GFF382 0.84 -0.6 423,645 - GFF382 0.84 -0.6 423,645 - GFF382 0.84 -1.6 423,645 - GFF382 0.84 -1.3 423,645 - GFF382 0.84 -1.3 423,645 - GFF382 0.84 -1.1 423,747 - GFF382 0.86 -1.4 423,805 - GFF382 0.88 -2.0 423,933 - -2.1 424,034 - -2.0 424,034 - -1.0 424,034 - -0.2 424,034 - -0.4 424,034 - -2.2 424,034 - -1.2 424,034 - -0.8 424,034 - -1.3 424,034 - -2.3 424,034 - -1.4 424,034 - -3.1 424,036 - -1.0 424,090 - -0.8 424,269 - -1.0 424,301 - -1.6 424,301 - +1.2 424,301 - -0.0 424,301 - -0.9 424,301 - -0.2 424,304 + +0.4 424,305 - +0.0 424,305 - -0.2 424,305 - -0.7 424,317 - -1.8 424,317 - -2.2 424,352 + +0.7 424,353 - +0.7 424,358 + -0.0 424,359 - +0.2 424,364 - +0.3 424,364 - +0.7 424,373 + -1.0 424,373 + -0.6 424,374 - -0.5 424,413 + -0.4 424,414 - -0.5 424,439 + -0.8 424,439 + +0.2 424,473 - -0.8 424,499 - +0.2 424,659 + +0.7 424,733 + GFF383 0.13 -1.3 424,733 + GFF383 0.13 -1.6 424,774 - GFF383 0.15 -0.9 424,815 + GFF383 0.17 -0.0 424,859 + GFF383 0.20 -1.8 424,860 - GFF383 0.20 -0.9 424,860 - GFF383 0.20 -0.9 424,907 - GFF383 0.22 -1.0 425,146 + GFF383 0.35 +0.9 425,147 - GFF383 0.35 -0.7 425,147 - GFF383 0.35 +0.7 425,237 + GFF383 0.39 -1.0
Or see this region's nucleotide sequence