Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF307 and GFF308 are separated by 71 nucleotides GFF308 and GFF309 are separated by 25 nucleotides GFF309 and GFF310 are separated by 45 nucleotides
GFF307 - hypothetical protein, at 325,782 to 326,339
GFF307
GFF308 - Ferric uptake regulation protein, at 326,411 to 326,833
GFF308
GFF309 - Outer membrane protein assembly factor BamE, at 326,859 to 329,342
GFF309
GFF310 - 4-hydroxy-tetrahydrodipicolinate reductase, at 329,388 to 330,194
GFF310
Position (kb) 326
327
328
329
330 Strain fitness (log2 ratio) -2
-1
0
1 at 325.933 kb on - strand, within GFF307 at 325.950 kb on - strand, within GFF307 at 325.976 kb on + strand, within GFF307 at 325.977 kb on - strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.985 kb on + strand, within GFF307 at 325.986 kb on - strand, within GFF307 at 325.986 kb on - strand, within GFF307 at 325.992 kb on + strand, within GFF307 at 325.992 kb on + strand, within GFF307 at 325.992 kb on + strand, within GFF307 at 325.993 kb on - strand, within GFF307 at 325.993 kb on - strand, within GFF307 at 325.993 kb on - strand, within GFF307 at 325.993 kb on - strand, within GFF307 at 326.013 kb on + strand, within GFF307 at 326.013 kb on + strand, within GFF307 at 326.025 kb on - strand, within GFF307 at 326.147 kb on - strand, within GFF307 at 326.173 kb on - strand, within GFF307 at 326.173 kb on - strand, within GFF307 at 326.215 kb on + strand, within GFF307 at 326.215 kb on + strand, within GFF307 at 326.215 kb on + strand, within GFF307 at 326.215 kb on + strand, within GFF307 at 326.215 kb on + strand, within GFF307 at 326.216 kb on - strand, within GFF307 at 326.216 kb on - strand, within GFF307 at 326.218 kb on + strand, within GFF307 at 326.218 kb on + strand, within GFF307 at 326.218 kb on + strand, within GFF307 at 326.218 kb on + strand, within GFF307 at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.291 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.312 kb on + strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.313 kb on - strand at 326.334 kb on + strand at 326.334 kb on + strand at 326.334 kb on + strand at 326.334 kb on + strand at 326.334 kb on + strand at 326.334 kb on + strand at 326.335 kb on - strand at 326.335 kb on - strand at 326.335 kb on - strand at 326.335 kb on - strand at 326.335 kb on - strand at 326.335 kb on - strand at 326.335 kb on - strand at 326.335 kb on - strand at 326.368 kb on + strand at 326.384 kb on - strand at 326.395 kb on - strand at 326.423 kb on - strand at 326.438 kb on - strand at 326.438 kb on - strand at 326.438 kb on - strand at 326.856 kb on - strand at 326.859 kb on - strand at 326.859 kb on - strand at 326.859 kb on - strand at 326.859 kb on - strand at 328.360 kb on + strand, within GFF309 at 328.397 kb on + strand, within GFF309 at 328.460 kb on + strand, within GFF309 at 328.499 kb on + strand, within GFF309 at 328.508 kb on + strand, within GFF309 at 328.515 kb on + strand, within GFF309 at 328.634 kb on + strand, within GFF309 at 328.637 kb on + strand, within GFF309 at 328.704 kb on + strand, within GFF309 at 328.704 kb on + strand, within GFF309 at 328.721 kb on + strand, within GFF309 at 328.721 kb on + strand, within GFF309 at 328.740 kb on + strand, within GFF309 at 328.765 kb on + strand, within GFF309 at 328.765 kb on + strand, within GFF309 at 328.769 kb on + strand, within GFF309 at 328.918 kb on + strand, within GFF309 at 328.918 kb on + strand, within GFF309 at 328.918 kb on + strand, within GFF309 at 328.918 kb on + strand, within GFF309 at 328.986 kb on + strand, within GFF309 at 329.018 kb on + strand, within GFF309 at 329.120 kb on + strand at 329.148 kb on + strand at 329.148 kb on + strand at 329.148 kb on + strand at 329.148 kb on + strand at 329.148 kb on + strand at 329.163 kb on + strand at 329.210 kb on + strand at 329.210 kb on + strand at 330.199 kb on + strand at 330.199 kb on + strand at 330.199 kb on + strand at 330.251 kb on + strand at 330.251 kb on + strand at 330.342 kb on + strand at 330.342 kb on + strand at 330.342 kb on + strand at 330.342 kb on + strand at 330.342 kb on + strand at 330.342 kb on + strand at 330.342 kb on + strand at 330.342 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 325,933 - GFF307 0.27 -1.0 325,950 - GFF307 0.30 -0.2 325,976 + GFF307 0.35 -1.0 325,977 - GFF307 0.35 -0.4 325,985 + GFF307 0.36 -0.8 325,985 + GFF307 0.36 -0.3 325,985 + GFF307 0.36 +0.0 325,985 + GFF307 0.36 -0.5 325,985 + GFF307 0.36 -0.4 325,985 + GFF307 0.36 -1.5 325,985 + GFF307 0.36 +0.6 325,985 + GFF307 0.36 -1.4 325,985 + GFF307 0.36 +0.1 325,986 - GFF307 0.37 -0.0 325,986 - GFF307 0.37 -1.1 325,992 + GFF307 0.38 -0.5 325,992 + GFF307 0.38 +0.7 325,992 + GFF307 0.38 -0.2 325,993 - GFF307 0.38 +0.3 325,993 - GFF307 0.38 -0.9 325,993 - GFF307 0.38 -0.3 325,993 - GFF307 0.38 +0.2 326,013 + GFF307 0.41 +1.0 326,013 + GFF307 0.41 -1.0 326,025 - GFF307 0.44 -1.8 326,147 - GFF307 0.65 +1.0 326,173 - GFF307 0.70 -0.0 326,173 - GFF307 0.70 -0.1 326,215 + GFF307 0.78 -0.6 326,215 + GFF307 0.78 -1.0 326,215 + GFF307 0.78 -1.6 326,215 + GFF307 0.78 -1.3 326,215 + GFF307 0.78 -0.7 326,216 - GFF307 0.78 +0.2 326,216 - GFF307 0.78 -0.3 326,218 + GFF307 0.78 -0.6 326,218 + GFF307 0.78 -0.6 326,218 + GFF307 0.78 -1.8 326,218 + GFF307 0.78 +1.3 326,291 + -0.8 326,291 + -1.0 326,291 + -0.2 326,291 + -1.3 326,291 + -0.3 326,291 + +0.4 326,291 + -0.3 326,291 + +0.3 326,291 + -1.3 326,291 + -1.4 326,291 + -0.9 326,312 + -0.1 326,312 + -1.0 326,312 + +0.2 326,312 + -2.3 326,312 + +0.2 326,312 + -0.0 326,312 + -2.0 326,312 + -1.0 326,312 + -0.2 326,312 + +0.6 326,312 + +0.1 326,312 + +0.6 326,312 + -1.0 326,312 + +1.4 326,313 - -1.0 326,313 - +0.1 326,313 - +0.2 326,313 - -0.8 326,313 - -0.1 326,313 - -0.6 326,313 - +1.0 326,313 - -1.6 326,313 - -0.6 326,313 - -0.2 326,334 + -1.0 326,334 + -0.0 326,334 + +0.3 326,334 + -1.9 326,334 + -0.8 326,334 + -1.2 326,335 - -0.5 326,335 - -2.0 326,335 - +0.7 326,335 - +0.6 326,335 - +1.6 326,335 - -0.3 326,335 - -1.6 326,335 - -0.3 326,368 + -1.6 326,384 - +1.0 326,395 - +0.1 326,423 - -1.0 326,438 - -0.0 326,438 - -1.8 326,438 - -0.6 326,856 - -1.6 326,859 - -0.2 326,859 - -1.6 326,859 - +0.0 326,859 - +1.2 328,360 + GFF309 0.60 -1.6 328,397 + GFF309 0.62 -0.8 328,460 + GFF309 0.64 -1.0 328,499 + GFF309 0.66 -1.1 328,508 + GFF309 0.66 -1.3 328,515 + GFF309 0.67 -0.9 328,634 + GFF309 0.71 -1.8 328,637 + GFF309 0.72 -0.4 328,704 + GFF309 0.74 -2.0 328,704 + GFF309 0.74 -2.0 328,721 + GFF309 0.75 -0.6 328,721 + GFF309 0.75 -1.1 328,740 + GFF309 0.76 -1.0 328,765 + GFF309 0.77 -0.6 328,765 + GFF309 0.77 -2.0 328,769 + GFF309 0.77 -0.6 328,918 + GFF309 0.83 -0.2 328,918 + GFF309 0.83 -0.8 328,918 + GFF309 0.83 -0.0 328,918 + GFF309 0.83 -1.8 328,986 + GFF309 0.86 -0.2 329,018 + GFF309 0.87 -1.2 329,120 + +0.2 329,148 + -0.0 329,148 + -1.6 329,148 + -0.6 329,148 + -1.3 329,148 + -1.8 329,163 + -1.8 329,210 + +0.4 329,210 + -0.5 330,199 + -1.0 330,199 + -0.0 330,199 + -0.0 330,251 + -0.3 330,251 + -0.6 330,342 + -0.3 330,342 + -1.3 330,342 + +0.6 330,342 + -1.0 330,342 + -0.5 330,342 + -0.1 330,342 + -0.5 330,342 + -1.0
Or see this region's nucleotide sequence