Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF288 and GFF289 overlap by 4 nucleotides GFF289 and GFF290 are separated by 29 nucleotides GFF290 and GFF291 are separated by 8 nucleotides
GFF288 - Inner membrane protein YejM, at 306,931 to 308,820
GFF288
GFF289 - Lipopolysaccharide core heptose(I) kinase RfaP, at 308,817 to 309,641
GFF289
GFF290 - hypothetical protein, at 309,671 to 310,333
GFF290
GFF291 - hypothetical protein, at 310,342 to 311,343
GFF291
GFF292 - hypothetical protein, at 311,303 to 312,433
GFF292
Position (kb) 309
310
311 Strain fitness (log2 ratio) -2
-1
0
1 at 309.639 kb on + strand at 309.639 kb on + strand at 309.639 kb on + strand at 309.639 kb on + strand at 309.639 kb on + strand at 309.639 kb on + strand at 309.640 kb on - strand at 309.640 kb on - strand at 309.640 kb on - strand at 309.640 kb on - strand at 309.672 kb on + strand at 309.672 kb on + strand at 309.687 kb on - strand at 309.687 kb on - strand at 309.697 kb on - strand at 309.847 kb on - strand, within GFF290 at 309.964 kb on - strand, within GFF290 at 310.017 kb on - strand, within GFF290 at 310.043 kb on - strand, within GFF290 at 310.043 kb on - strand, within GFF290 at 310.150 kb on - strand, within GFF290 at 310.197 kb on + strand, within GFF290 at 310.197 kb on + strand, within GFF290 at 310.294 kb on + strand at 310.333 kb on + strand at 310.443 kb on + strand, within GFF291 at 310.444 kb on - strand, within GFF291 at 310.444 kb on - strand, within GFF291 at 310.446 kb on - strand, within GFF291 at 310.448 kb on - strand, within GFF291 at 310.693 kb on - strand, within GFF291 at 311.040 kb on - strand, within GFF291 at 311.301 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 309,639 + +0.5 309,639 + -0.7 309,639 + +0.2 309,639 + -0.1 309,639 + -0.4 309,639 + -0.5 309,640 - -0.0 309,640 - -1.0 309,640 - +0.5 309,640 - -1.6 309,672 + -0.1 309,672 + +0.6 309,687 - -1.0 309,687 - -1.0 309,697 - -1.3 309,847 - GFF290 0.27 -0.2 309,964 - GFF290 0.44 -1.0 310,017 - GFF290 0.52 -0.3 310,043 - GFF290 0.56 -0.0 310,043 - GFF290 0.56 -1.3 310,150 - GFF290 0.72 -0.7 310,197 + GFF290 0.79 -0.0 310,197 + GFF290 0.79 -1.0 310,294 + -1.3 310,333 + -1.7 310,443 + GFF291 0.10 -1.0 310,444 - GFF291 0.10 -0.0 310,444 - GFF291 0.10 -2.5 310,446 - GFF291 0.10 -1.3 310,448 - GFF291 0.11 -0.6 310,693 - GFF291 0.35 -1.0 311,040 - GFF291 0.70 -1.3 311,301 - -1.3
Or see this region's nucleotide sequence