Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2747 and GFF2748 are separated by 124 nucleotides GFF2748 and GFF2749 are separated by 154 nucleotides
GFF2747 - Fructose-bisphosphate aldolase, at 149,674 to 150,708
GFF2747
GFF2748 - Bifunctional PGK/TIM, at 150,833 to 151,663
GFF2748
GFF2749 - (6-4) photolyase, at 151,818 to 153,362
GFF2749
Position (kb) 150
151
152 Strain fitness (log2 ratio) -2
-1
0
1 at 149.910 kb on + strand, within GFF2747 at 150.031 kb on + strand, within GFF2747 at 150.415 kb on + strand, within GFF2747 at 150.426 kb on + strand, within GFF2747 at 150.546 kb on + strand, within GFF2747 at 150.699 kb on + strand at 150.704 kb on - strand at 150.772 kb on + strand at 150.773 kb on - strand at 150.820 kb on + strand at 150.962 kb on + strand, within GFF2748 at 151.040 kb on - strand, within GFF2748 at 151.054 kb on + strand, within GFF2748 at 151.168 kb on + strand, within GFF2748 at 151.286 kb on + strand, within GFF2748 at 151.286 kb on + strand, within GFF2748 at 151.286 kb on + strand, within GFF2748 at 151.620 kb on + strand at 151.620 kb on + strand at 151.624 kb on + strand at 151.624 kb on + strand at 151.694 kb on + strand at 151.694 kb on + strand at 151.694 kb on + strand at 151.694 kb on + strand at 151.695 kb on - strand at 151.740 kb on + strand at 151.752 kb on + strand at 151.774 kb on + strand at 151.774 kb on + strand at 151.774 kb on + strand at 151.775 kb on - strand at 151.835 kb on + strand at 151.901 kb on + strand at 151.901 kb on + strand at 151.901 kb on + strand at 151.901 kb on + strand at 151.902 kb on - strand at 151.906 kb on + strand at 151.906 kb on + strand at 151.931 kb on + strand at 151.931 kb on + strand at 151.931 kb on + strand at 152.028 kb on + strand, within GFF2749 at 152.028 kb on + strand, within GFF2749 at 152.028 kb on + strand, within GFF2749 at 152.029 kb on - strand, within GFF2749 at 152.053 kb on - strand, within GFF2749 at 152.116 kb on + strand, within GFF2749 at 152.152 kb on + strand, within GFF2749 at 152.152 kb on + strand, within GFF2749 at 152.152 kb on + strand, within GFF2749 at 152.153 kb on - strand, within GFF2749 at 152.153 kb on - strand, within GFF2749 at 152.210 kb on + strand, within GFF2749 at 152.210 kb on + strand, within GFF2749 at 152.210 kb on + strand, within GFF2749 at 152.211 kb on - strand, within GFF2749 at 152.211 kb on - strand, within GFF2749 at 152.251 kb on - strand, within GFF2749 at 152.311 kb on - strand, within GFF2749 at 152.358 kb on + strand, within GFF2749 at 152.358 kb on + strand, within GFF2749 at 152.358 kb on + strand, within GFF2749 at 152.358 kb on + strand, within GFF2749 at 152.358 kb on + strand, within GFF2749 at 152.358 kb on + strand, within GFF2749 at 152.358 kb on + strand, within GFF2749 at 152.359 kb on - strand, within GFF2749 at 152.359 kb on - strand, within GFF2749 at 152.469 kb on - strand, within GFF2749 at 152.469 kb on - strand, within GFF2749 at 152.586 kb on + strand, within GFF2749 at 152.616 kb on + strand, within GFF2749 at 152.616 kb on + strand, within GFF2749 at 152.616 kb on + strand, within GFF2749 at 152.616 kb on + strand, within GFF2749 at 152.617 kb on - strand, within GFF2749
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 149,910 + GFF2747 0.23 +0.0 150,031 + GFF2747 0.34 -1.3 150,415 + GFF2747 0.72 -1.3 150,426 + GFF2747 0.73 +0.0 150,546 + GFF2747 0.84 +1.0 150,699 + -0.2 150,704 - -0.3 150,772 + -1.0 150,773 - -1.6 150,820 + -1.2 150,962 + GFF2748 0.16 -0.6 151,040 - GFF2748 0.25 +1.0 151,054 + GFF2748 0.27 -1.3 151,168 + GFF2748 0.40 -2.0 151,286 + GFF2748 0.55 +0.0 151,286 + GFF2748 0.55 -1.3 151,286 + GFF2748 0.55 +0.0 151,620 + -1.2 151,620 + -0.4 151,624 + +0.0 151,624 + +1.3 151,694 + -0.4 151,694 + -2.0 151,694 + +0.4 151,694 + -0.2 151,695 - -0.4 151,740 + -1.0 151,752 + -0.2 151,774 + +0.0 151,774 + -0.3 151,774 + -1.6 151,775 - +0.0 151,835 + -0.8 151,901 + -0.5 151,901 + -1.7 151,901 + -0.6 151,901 + +0.4 151,902 - -0.9 151,906 + -0.1 151,906 + -1.1 151,931 + -0.4 151,931 + -0.1 151,931 + -0.3 152,028 + GFF2749 0.14 -0.9 152,028 + GFF2749 0.14 +1.0 152,028 + GFF2749 0.14 -1.2 152,029 - GFF2749 0.14 +0.2 152,053 - GFF2749 0.15 +0.0 152,116 + GFF2749 0.19 -0.9 152,152 + GFF2749 0.22 -1.1 152,152 + GFF2749 0.22 -1.2 152,152 + GFF2749 0.22 -0.5 152,153 - GFF2749 0.22 -0.3 152,153 - GFF2749 0.22 +0.6 152,210 + GFF2749 0.25 +0.8 152,210 + GFF2749 0.25 -0.6 152,210 + GFF2749 0.25 -0.2 152,211 - GFF2749 0.25 +0.6 152,211 - GFF2749 0.25 +0.6 152,251 - GFF2749 0.28 -0.3 152,311 - GFF2749 0.32 +0.6 152,358 + GFF2749 0.35 -0.9 152,358 + GFF2749 0.35 -1.8 152,358 + GFF2749 0.35 +0.3 152,358 + GFF2749 0.35 -0.2 152,358 + GFF2749 0.35 +0.8 152,358 + GFF2749 0.35 -1.0 152,358 + GFF2749 0.35 -0.7 152,359 - GFF2749 0.35 -0.6 152,359 - GFF2749 0.35 -1.2 152,469 - GFF2749 0.42 +0.0 152,469 - GFF2749 0.42 +1.3 152,586 + GFF2749 0.50 -1.3 152,616 + GFF2749 0.52 +0.1 152,616 + GFF2749 0.52 -0.4 152,616 + GFF2749 0.52 -1.8 152,616 + GFF2749 0.52 -0.4 152,617 - GFF2749 0.52 -2.4
Or see this region's nucleotide sequence