Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2735 and GFF2736 are separated by 49 nucleotides GFF2736 and GFF2737 are separated by 47 nucleotides GFF2737 and GFF2738 are separated by 22 nucleotides GFF2738 and GFF2739 overlap by 4 nucleotides
GFF2735 - Elongation factor 4, at 138,393 to 140,192
GFF2735
GFF2736 - Signal peptidase I, at 140,242 to 141,057
GFF2736
GFF2737 - hypothetical protein, at 141,105 to 141,458
GFF2737
GFF2738 - Ribonuclease 3, at 141,481 to 142,152
GFF2738
GFF2739 - GTPase Era, at 142,149 to 143,051
GFF2739
Position (kb) 141
142 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 140.179 kb on + strand at 140.179 kb on + strand at 140.179 kb on + strand at 140.186 kb on + strand at 140.190 kb on + strand at 140.190 kb on + strand at 141.104 kb on + strand at 141.104 kb on + strand at 141.104 kb on + strand at 141.104 kb on + strand at 141.111 kb on + strand at 141.111 kb on + strand at 141.216 kb on + strand, within GFF2737 at 141.216 kb on + strand, within GFF2737 at 141.216 kb on + strand, within GFF2737 at 141.216 kb on + strand, within GFF2737 at 141.216 kb on + strand, within GFF2737 at 141.216 kb on + strand, within GFF2737 at 141.217 kb on - strand, within GFF2737 at 141.218 kb on + strand, within GFF2737 at 141.218 kb on + strand, within GFF2737 at 141.218 kb on + strand, within GFF2737 at 141.225 kb on + strand, within GFF2737 at 141.225 kb on + strand, within GFF2737 at 141.225 kb on + strand, within GFF2737 at 141.326 kb on + strand, within GFF2737 at 141.326 kb on + strand, within GFF2737 at 141.326 kb on + strand, within GFF2737 at 141.330 kb on - strand, within GFF2737 at 141.333 kb on - strand, within GFF2737 at 141.488 kb on + strand at 141.500 kb on + strand at 141.500 kb on + strand at 141.677 kb on + strand, within GFF2738 at 141.677 kb on + strand, within GFF2738 at 141.677 kb on + strand, within GFF2738 at 141.804 kb on + strand, within GFF2738 at 141.914 kb on + strand, within GFF2738 at 141.914 kb on + strand, within GFF2738 at 141.914 kb on + strand, within GFF2738 at 141.914 kb on + strand, within GFF2738
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 140,179 + -0.3 140,179 + +0.0 140,179 + +0.8 140,186 + -0.4 140,190 + -2.2 140,190 + +0.0 141,104 + -0.1 141,104 + -0.3 141,104 + -0.7 141,104 + -0.6 141,111 + +0.3 141,111 + -1.5 141,216 + GFF2737 0.31 -1.0 141,216 + GFF2737 0.31 -0.6 141,216 + GFF2737 0.31 +1.0 141,216 + GFF2737 0.31 -1.6 141,216 + GFF2737 0.31 -0.7 141,216 + GFF2737 0.31 +0.1 141,217 - GFF2737 0.32 -1.0 141,218 + GFF2737 0.32 +0.2 141,218 + GFF2737 0.32 -1.3 141,218 + GFF2737 0.32 -0.7 141,225 + GFF2737 0.34 +0.0 141,225 + GFF2737 0.34 -2.3 141,225 + GFF2737 0.34 -1.0 141,326 + GFF2737 0.62 -1.6 141,326 + GFF2737 0.62 -1.0 141,326 + GFF2737 0.62 -0.7 141,330 - GFF2737 0.64 -1.0 141,333 - GFF2737 0.64 -1.0 141,488 + -0.2 141,500 + +0.6 141,500 + +0.1 141,677 + GFF2738 0.29 -1.0 141,677 + GFF2738 0.29 +1.0 141,677 + GFF2738 0.29 -0.6 141,804 + GFF2738 0.48 -2.4 141,914 + GFF2738 0.64 -1.0 141,914 + GFF2738 0.64 -3.2 141,914 + GFF2738 0.64 -0.8 141,914 + GFF2738 0.64 +0.5
Or see this region's nucleotide sequence