Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2582 and GFF2583 are separated by 2 nucleotides GFF2583 and GFF2584 overlap by 4 nucleotides
GFF2582 - Cobalt-zinc-cadmium resistance protein CzcA, at 283,712 to 286,786
GFF2582
GFF2583 - Nickel and cobalt resistance protein CnrB, at 286,789 to 287,877
GFF2583
GFF2584 - hypothetical protein, at 287,874 to 289,166
GFF2584
Position (kb) 286
287
288 Strain fitness (log2 ratio) -2
-1
0
1 at 285.791 kb on + strand, within GFF2582 at 285.811 kb on + strand, within GFF2582 at 285.812 kb on - strand, within GFF2582 at 285.823 kb on - strand, within GFF2582 at 285.836 kb on - strand, within GFF2582 at 285.884 kb on + strand, within GFF2582 at 285.885 kb on - strand, within GFF2582 at 286.025 kb on + strand, within GFF2582 at 286.025 kb on + strand, within GFF2582 at 286.026 kb on - strand, within GFF2582 at 286.100 kb on + strand, within GFF2582 at 286.101 kb on - strand, within GFF2582 at 286.355 kb on + strand, within GFF2582 at 286.476 kb on + strand, within GFF2582 at 286.476 kb on - strand, within GFF2582 at 286.477 kb on - strand, within GFF2582 at 286.477 kb on - strand, within GFF2582 at 286.477 kb on - strand, within GFF2582 at 286.477 kb on - strand, within GFF2582 at 286.524 kb on + strand at 286.525 kb on - strand at 286.541 kb on + strand at 286.542 kb on - strand at 286.591 kb on + strand at 286.591 kb on + strand at 286.639 kb on + strand at 286.790 kb on + strand at 286.790 kb on + strand at 286.790 kb on + strand at 286.791 kb on - strand at 286.791 kb on - strand at 286.823 kb on - strand at 286.878 kb on + strand at 286.879 kb on - strand at 287.016 kb on + strand, within GFF2583 at 287.016 kb on + strand, within GFF2583 at 287.017 kb on - strand, within GFF2583 at 287.272 kb on - strand, within GFF2583 at 287.323 kb on - strand, within GFF2583 at 287.487 kb on + strand, within GFF2583 at 287.488 kb on - strand, within GFF2583 at 287.564 kb on + strand, within GFF2583 at 287.726 kb on + strand, within GFF2583 at 287.727 kb on - strand, within GFF2583 at 287.861 kb on - strand at 287.902 kb on + strand at 287.903 kb on - strand at 287.903 kb on - strand at 287.903 kb on - strand at 287.982 kb on + strand at 287.982 kb on + strand at 287.985 kb on + strand at 287.986 kb on - strand at 288.017 kb on - strand, within GFF2584 at 288.241 kb on + strand, within GFF2584 at 288.241 kb on + strand, within GFF2584 at 288.242 kb on - strand, within GFF2584 at 288.242 kb on - strand, within GFF2584 at 288.242 kb on - strand, within GFF2584 at 288.285 kb on + strand, within GFF2584 at 288.285 kb on + strand, within GFF2584 at 288.285 kb on + strand, within GFF2584 at 288.285 kb on + strand, within GFF2584 at 288.286 kb on - strand, within GFF2584 at 288.286 kb on - strand, within GFF2584 at 288.286 kb on - strand, within GFF2584 at 288.286 kb on - strand, within GFF2584 at 288.286 kb on - strand, within GFF2584 at 288.286 kb on - strand, within GFF2584 at 288.296 kb on + strand, within GFF2584 at 288.297 kb on - strand, within GFF2584 at 288.331 kb on - strand, within GFF2584 at 288.331 kb on - strand, within GFF2584 at 288.405 kb on - strand, within GFF2584 at 288.406 kb on + strand, within GFF2584 at 288.651 kb on + strand, within GFF2584 at 288.652 kb on - strand, within GFF2584 at 288.652 kb on - strand, within GFF2584 at 288.652 kb on - strand, within GFF2584 at 288.652 kb on - strand, within GFF2584
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 285,791 + GFF2582 0.68 +0.7 285,811 + GFF2582 0.68 -0.3 285,812 - GFF2582 0.68 -0.8 285,823 - GFF2582 0.69 +0.1 285,836 - GFF2582 0.69 -0.3 285,884 + GFF2582 0.71 -0.5 285,885 - GFF2582 0.71 -0.7 286,025 + GFF2582 0.75 -0.0 286,025 + GFF2582 0.75 -0.4 286,026 - GFF2582 0.75 -0.0 286,100 + GFF2582 0.78 -1.8 286,101 - GFF2582 0.78 -1.0 286,355 + GFF2582 0.86 -0.0 286,476 + GFF2582 0.90 +0.5 286,476 - GFF2582 0.90 +0.1 286,477 - GFF2582 0.90 -0.5 286,477 - GFF2582 0.90 +0.5 286,477 - GFF2582 0.90 +0.3 286,477 - GFF2582 0.90 -0.0 286,524 + -1.6 286,525 - -0.3 286,541 + -0.2 286,542 - -0.0 286,591 + -1.5 286,591 + -0.8 286,639 + -0.4 286,790 + -0.0 286,790 + -1.5 286,790 + -1.5 286,791 - -0.4 286,791 - -0.4 286,823 - -0.8 286,878 + -1.3 286,879 - +0.5 287,016 + GFF2583 0.21 -1.0 287,016 + GFF2583 0.21 -1.6 287,017 - GFF2583 0.21 +0.6 287,272 - GFF2583 0.44 +0.4 287,323 - GFF2583 0.49 -0.7 287,487 + GFF2583 0.64 -0.6 287,488 - GFF2583 0.64 -1.3 287,564 + GFF2583 0.71 -1.8 287,726 + GFF2583 0.86 -1.3 287,727 - GFF2583 0.86 -0.3 287,861 - +0.6 287,902 + -0.4 287,903 - -0.6 287,903 - -0.7 287,903 - -0.6 287,982 + -1.8 287,982 + -1.3 287,985 + -0.4 287,986 - -0.7 288,017 - GFF2584 0.11 +0.4 288,241 + GFF2584 0.28 -1.6 288,241 + GFF2584 0.28 +0.8 288,242 - GFF2584 0.28 -0.1 288,242 - GFF2584 0.28 -1.0 288,242 - GFF2584 0.28 +0.3 288,285 + GFF2584 0.32 +0.7 288,285 + GFF2584 0.32 -0.0 288,285 + GFF2584 0.32 +0.7 288,285 + GFF2584 0.32 +0.7 288,286 - GFF2584 0.32 -1.3 288,286 - GFF2584 0.32 +0.1 288,286 - GFF2584 0.32 +0.5 288,286 - GFF2584 0.32 -2.0 288,286 - GFF2584 0.32 -2.5 288,286 - GFF2584 0.32 +0.3 288,296 + GFF2584 0.33 -1.0 288,297 - GFF2584 0.33 -0.0 288,331 - GFF2584 0.35 -0.5 288,331 - GFF2584 0.35 -1.0 288,405 - GFF2584 0.41 +0.1 288,406 + GFF2584 0.41 -0.0 288,651 + GFF2584 0.60 -0.2 288,652 - GFF2584 0.60 -1.2 288,652 - GFF2584 0.60 -0.4 288,652 - GFF2584 0.60 -0.3 288,652 - GFF2584 0.60 -0.3
Or see this region's nucleotide sequence