Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2575 and GFF2576 are separated by 156 nucleotides GFF2576 and GFF2577 are separated by 112 nucleotides
GFF2575 - hypothetical protein, at 275,203 to 276,876
GFF2575
GFF2576 - Phosphate regulon transcriptional regulatory protein PhoB, at 277,033 to 277,740
GFF2576
GFF2577 - hypothetical protein, at 277,853 to 279,481
GFF2577
Position (kb) 277
278 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 276.052 kb on - strand, within GFF2575 at 276.070 kb on + strand, within GFF2575 at 276.070 kb on + strand, within GFF2575 at 276.070 kb on + strand, within GFF2575 at 276.070 kb on + strand, within GFF2575 at 276.070 kb on + strand, within GFF2575 at 276.070 kb on + strand, within GFF2575 at 276.071 kb on - strand, within GFF2575 at 276.071 kb on - strand, within GFF2575 at 276.071 kb on - strand, within GFF2575 at 276.071 kb on - strand, within GFF2575 at 276.071 kb on - strand, within GFF2575 at 276.103 kb on + strand, within GFF2575 at 276.104 kb on - strand, within GFF2575 at 276.104 kb on - strand, within GFF2575 at 276.189 kb on - strand, within GFF2575 at 276.280 kb on + strand, within GFF2575 at 276.280 kb on + strand, within GFF2575 at 276.280 kb on + strand, within GFF2575 at 276.281 kb on - strand, within GFF2575 at 276.352 kb on - strand, within GFF2575 at 276.352 kb on - strand, within GFF2575 at 276.352 kb on - strand, within GFF2575 at 276.377 kb on + strand, within GFF2575 at 276.377 kb on + strand, within GFF2575 at 276.377 kb on + strand, within GFF2575 at 276.377 kb on + strand, within GFF2575 at 276.378 kb on - strand, within GFF2575 at 276.382 kb on + strand, within GFF2575 at 276.448 kb on + strand, within GFF2575 at 276.448 kb on + strand, within GFF2575 at 276.448 kb on + strand, within GFF2575 at 276.510 kb on + strand, within GFF2575 at 276.565 kb on + strand, within GFF2575 at 276.565 kb on + strand, within GFF2575 at 276.565 kb on + strand, within GFF2575 at 276.566 kb on - strand, within GFF2575 at 276.582 kb on + strand, within GFF2575 at 276.582 kb on + strand, within GFF2575 at 276.582 kb on + strand, within GFF2575 at 276.584 kb on + strand, within GFF2575 at 276.584 kb on + strand, within GFF2575 at 276.584 kb on + strand, within GFF2575 at 276.584 kb on + strand, within GFF2575 at 276.584 kb on + strand, within GFF2575 at 276.584 kb on + strand, within GFF2575 at 276.584 kb on + strand, within GFF2575 at 276.584 kb on + strand, within GFF2575 at 276.585 kb on - strand, within GFF2575 at 276.585 kb on - strand, within GFF2575 at 276.585 kb on - strand, within GFF2575 at 276.585 kb on - strand, within GFF2575 at 276.585 kb on - strand, within GFF2575 at 276.616 kb on - strand, within GFF2575 at 276.758 kb on + strand at 276.769 kb on + strand at 276.770 kb on - strand at 276.770 kb on - strand at 276.782 kb on - strand at 276.834 kb on + strand at 276.835 kb on - strand at 276.835 kb on - strand at 276.835 kb on - strand at 276.855 kb on + strand at 276.864 kb on + strand at 276.865 kb on - strand at 276.865 kb on - strand at 276.878 kb on + strand at 276.888 kb on - strand at 276.891 kb on + strand at 276.892 kb on - strand at 276.897 kb on + strand at 276.919 kb on + strand at 276.932 kb on + strand at 276.938 kb on + strand at 276.954 kb on + strand at 276.999 kb on + strand at 277.014 kb on - strand at 277.014 kb on - strand at 277.014 kb on - strand at 277.058 kb on - strand at 277.059 kb on - strand at 277.059 kb on - strand at 277.059 kb on - strand at 277.123 kb on - strand, within GFF2576 at 277.160 kb on + strand, within GFF2576 at 277.240 kb on - strand, within GFF2576 at 277.272 kb on + strand, within GFF2576 at 277.273 kb on - strand, within GFF2576 at 277.339 kb on + strand, within GFF2576 at 277.339 kb on + strand, within GFF2576 at 277.339 kb on + strand, within GFF2576 at 277.339 kb on + strand, within GFF2576 at 277.339 kb on + strand, within GFF2576 at 277.340 kb on - strand, within GFF2576 at 277.370 kb on + strand, within GFF2576 at 277.451 kb on + strand, within GFF2576 at 277.482 kb on + strand, within GFF2576 at 277.482 kb on + strand, within GFF2576 at 277.482 kb on + strand, within GFF2576 at 277.482 kb on + strand, within GFF2576 at 277.482 kb on + strand, within GFF2576 at 277.483 kb on - strand, within GFF2576 at 277.483 kb on - strand, within GFF2576 at 277.483 kb on - strand, within GFF2576 at 277.483 kb on - strand, within GFF2576 at 277.483 kb on - strand, within GFF2576 at 277.483 kb on - strand, within GFF2576 at 277.483 kb on - strand, within GFF2576 at 277.629 kb on + strand, within GFF2576 at 277.629 kb on + strand, within GFF2576 at 277.629 kb on + strand, within GFF2576 at 277.630 kb on - strand, within GFF2576 at 277.640 kb on + strand, within GFF2576 at 277.720 kb on - strand at 277.739 kb on - strand at 277.752 kb on + strand at 277.765 kb on + strand at 277.766 kb on - strand at 277.766 kb on - strand at 277.791 kb on + strand at 277.923 kb on + strand at 277.923 kb on + strand at 277.924 kb on - strand at 277.924 kb on - strand at 277.924 kb on - strand at 277.924 kb on - strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.979 kb on + strand at 277.980 kb on - strand at 277.980 kb on - strand at 277.980 kb on - strand at 277.980 kb on - strand at 277.990 kb on + strand at 277.990 kb on + strand at 277.990 kb on + strand at 277.990 kb on + strand at 277.990 kb on + strand at 277.991 kb on - strand at 277.991 kb on - strand at 277.991 kb on - strand at 277.991 kb on - strand at 277.991 kb on - strand at 277.991 kb on - strand at 277.991 kb on - strand at 277.991 kb on - strand at 277.994 kb on + strand at 277.994 kb on + strand at 277.994 kb on + strand at 277.994 kb on + strand at 277.994 kb on + strand at 277.995 kb on - strand at 277.995 kb on - strand at 277.995 kb on - strand at 278.059 kb on + strand, within GFF2577 at 278.059 kb on + strand, within GFF2577 at 278.060 kb on - strand, within GFF2577 at 278.067 kb on - strand, within GFF2577 at 278.072 kb on + strand, within GFF2577 at 278.072 kb on + strand, within GFF2577 at 278.072 kb on + strand, within GFF2577 at 278.072 kb on + strand, within GFF2577 at 278.073 kb on - strand, within GFF2577 at 278.073 kb on - strand, within GFF2577 at 278.092 kb on + strand, within GFF2577 at 278.114 kb on + strand, within GFF2577 at 278.114 kb on + strand, within GFF2577 at 278.114 kb on + strand, within GFF2577 at 278.115 kb on - strand, within GFF2577 at 278.115 kb on - strand, within GFF2577 at 278.208 kb on + strand, within GFF2577 at 278.208 kb on + strand, within GFF2577 at 278.208 kb on + strand, within GFF2577 at 278.287 kb on + strand, within GFF2577 at 278.330 kb on + strand, within GFF2577 at 278.330 kb on + strand, within GFF2577 at 278.331 kb on - strand, within GFF2577 at 278.331 kb on - strand, within GFF2577 at 278.331 kb on - strand, within GFF2577 at 278.331 kb on - strand, within GFF2577 at 278.450 kb on + strand, within GFF2577 at 278.451 kb on - strand, within GFF2577 at 278.451 kb on - strand, within GFF2577 at 278.503 kb on + strand, within GFF2577 at 278.504 kb on - strand, within GFF2577 at 278.531 kb on - strand, within GFF2577 at 278.656 kb on + strand, within GFF2577 at 278.656 kb on + strand, within GFF2577 at 278.656 kb on + strand, within GFF2577 at 278.657 kb on - strand, within GFF2577 at 278.660 kb on - strand, within GFF2577 at 278.660 kb on - strand, within GFF2577 at 278.660 kb on - strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.687 kb on + strand, within GFF2577 at 278.688 kb on - strand, within GFF2577 at 278.688 kb on - strand, within GFF2577 at 278.688 kb on - strand, within GFF2577 at 278.688 kb on - strand, within GFF2577 at 278.689 kb on + strand, within GFF2577 at 278.689 kb on + strand, within GFF2577 at 278.690 kb on - strand, within GFF2577 at 278.714 kb on + strand, within GFF2577 at 278.714 kb on + strand, within GFF2577 at 278.715 kb on - strand, within GFF2577 at 278.715 kb on - strand, within GFF2577 at 278.727 kb on - strand, within GFF2577 at 278.727 kb on - strand, within GFF2577
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 276,052 - GFF2575 0.51 +0.2 276,070 + GFF2575 0.52 -0.0 276,070 + GFF2575 0.52 -0.6 276,070 + GFF2575 0.52 +0.3 276,070 + GFF2575 0.52 +0.6 276,070 + GFF2575 0.52 -0.3 276,070 + GFF2575 0.52 +0.3 276,071 - GFF2575 0.52 -0.3 276,071 - GFF2575 0.52 -0.6 276,071 - GFF2575 0.52 -0.3 276,071 - GFF2575 0.52 -1.2 276,071 - GFF2575 0.52 -0.8 276,103 + GFF2575 0.54 +0.2 276,104 - GFF2575 0.54 -0.8 276,104 - GFF2575 0.54 +0.6 276,189 - GFF2575 0.59 -2.0 276,280 + GFF2575 0.64 -1.6 276,280 + GFF2575 0.64 -0.6 276,280 + GFF2575 0.64 -0.6 276,281 - GFF2575 0.64 +1.2 276,352 - GFF2575 0.69 -1.0 276,352 - GFF2575 0.69 +0.3 276,352 - GFF2575 0.69 +1.2 276,377 + GFF2575 0.70 +0.4 276,377 + GFF2575 0.70 -0.8 276,377 + GFF2575 0.70 -1.8 276,377 + GFF2575 0.70 +0.8 276,378 - GFF2575 0.70 -0.6 276,382 + GFF2575 0.70 -0.6 276,448 + GFF2575 0.74 -1.3 276,448 + GFF2575 0.74 -0.0 276,448 + GFF2575 0.74 +0.7 276,510 + GFF2575 0.78 -0.6 276,565 + GFF2575 0.81 +0.1 276,565 + GFF2575 0.81 -0.9 276,565 + GFF2575 0.81 -1.3 276,566 - GFF2575 0.81 -1.0 276,582 + GFF2575 0.82 -0.7 276,582 + GFF2575 0.82 -1.9 276,582 + GFF2575 0.82 -0.6 276,584 + GFF2575 0.82 -0.6 276,584 + GFF2575 0.82 -0.3 276,584 + GFF2575 0.82 -0.4 276,584 + GFF2575 0.82 -0.4 276,584 + GFF2575 0.82 +0.7 276,584 + GFF2575 0.82 -0.7 276,584 + GFF2575 0.82 -0.6 276,584 + GFF2575 0.82 -1.3 276,585 - GFF2575 0.83 -0.7 276,585 - GFF2575 0.83 +1.3 276,585 - GFF2575 0.83 -2.0 276,585 - GFF2575 0.83 -0.6 276,585 - GFF2575 0.83 -0.0 276,616 - GFF2575 0.84 -0.0 276,758 + -0.7 276,769 + -0.6 276,770 - -0.3 276,770 - -1.2 276,782 - -1.0 276,834 + -0.8 276,835 - -0.2 276,835 - -0.2 276,835 - +0.3 276,855 + +0.3 276,864 + -0.0 276,865 - -0.2 276,865 - +1.7 276,878 + -1.6 276,888 - -0.6 276,891 + +0.7 276,892 - -0.4 276,897 + +0.2 276,919 + +1.3 276,932 + -1.0 276,938 + -0.7 276,954 + -1.0 276,999 + -1.7 277,014 - -0.4 277,014 - -1.0 277,014 - -0.4 277,058 - -3.0 277,059 - -1.1 277,059 - -0.3 277,059 - -0.6 277,123 - GFF2576 0.13 -1.8 277,160 + GFF2576 0.18 -0.8 277,240 - GFF2576 0.29 -1.0 277,272 + GFF2576 0.34 -2.5 277,273 - GFF2576 0.34 -0.2 277,339 + GFF2576 0.43 -0.0 277,339 + GFF2576 0.43 -1.3 277,339 + GFF2576 0.43 -1.8 277,339 + GFF2576 0.43 -1.3 277,339 + GFF2576 0.43 -3.0 277,340 - GFF2576 0.43 -1.6 277,370 + GFF2576 0.48 -0.5 277,451 + GFF2576 0.59 -2.7 277,482 + GFF2576 0.63 -1.0 277,482 + GFF2576 0.63 -1.0 277,482 + GFF2576 0.63 -2.0 277,482 + GFF2576 0.63 +0.3 277,482 + GFF2576 0.63 -1.0 277,483 - GFF2576 0.64 -0.6 277,483 - GFF2576 0.64 -0.7 277,483 - GFF2576 0.64 -0.0 277,483 - GFF2576 0.64 -0.9 277,483 - GFF2576 0.64 -0.6 277,483 - GFF2576 0.64 -1.0 277,483 - GFF2576 0.64 -0.9 277,629 + GFF2576 0.84 -0.3 277,629 + GFF2576 0.84 -1.3 277,629 + GFF2576 0.84 -2.5 277,630 - GFF2576 0.84 -0.8 277,640 + GFF2576 0.86 -0.2 277,720 - -0.3 277,739 - -0.3 277,752 + -0.7 277,765 + -1.0 277,766 - -0.2 277,766 - -0.6 277,791 + -0.6 277,923 + -0.2 277,923 + -0.9 277,924 - -1.6 277,924 - -0.6 277,924 - -0.3 277,924 - -0.0 277,979 + -0.8 277,979 + -1.6 277,979 + -1.0 277,979 + -0.4 277,979 + -1.8 277,979 + -0.2 277,979 + +1.0 277,979 + -0.3 277,979 + -0.8 277,979 + -0.2 277,979 + +0.2 277,979 + +0.3 277,979 + +0.2 277,980 - -0.2 277,980 - -0.0 277,980 - +0.7 277,980 - -1.0 277,990 + -0.5 277,990 + -0.1 277,990 + +0.3 277,990 + +0.6 277,990 + -0.7 277,991 - -0.9 277,991 - -0.1 277,991 - -0.7 277,991 - -1.3 277,991 - -2.1 277,991 - -1.8 277,991 - -1.1 277,991 - -0.3 277,994 + -0.1 277,994 + -1.8 277,994 + +0.2 277,994 + -0.0 277,994 + -0.5 277,995 - -0.3 277,995 - -1.2 277,995 - -1.3 278,059 + GFF2577 0.13 -0.4 278,059 + GFF2577 0.13 -0.6 278,060 - GFF2577 0.13 +0.3 278,067 - GFF2577 0.13 +0.1 278,072 + GFF2577 0.13 -1.7 278,072 + GFF2577 0.13 -0.3 278,072 + GFF2577 0.13 -0.4 278,072 + GFF2577 0.13 +0.7 278,073 - GFF2577 0.14 -1.3 278,073 - GFF2577 0.14 -0.3 278,092 + GFF2577 0.15 +0.4 278,114 + GFF2577 0.16 -1.3 278,114 + GFF2577 0.16 -1.6 278,114 + GFF2577 0.16 -0.3 278,115 - GFF2577 0.16 +1.8 278,115 - GFF2577 0.16 -1.7 278,208 + GFF2577 0.22 -1.0 278,208 + GFF2577 0.22 -0.0 278,208 + GFF2577 0.22 +0.3 278,287 + GFF2577 0.27 -1.0 278,330 + GFF2577 0.29 -1.0 278,330 + GFF2577 0.29 +0.3 278,331 - GFF2577 0.29 -1.2 278,331 - GFF2577 0.29 -0.3 278,331 - GFF2577 0.29 -0.3 278,331 - GFF2577 0.29 -0.3 278,450 + GFF2577 0.37 -1.2 278,451 - GFF2577 0.37 -2.0 278,451 - GFF2577 0.37 -0.4 278,503 + GFF2577 0.40 -1.4 278,504 - GFF2577 0.40 -0.4 278,531 - GFF2577 0.42 -0.0 278,656 + GFF2577 0.49 -1.0 278,656 + GFF2577 0.49 -0.9 278,656 + GFF2577 0.49 -0.1 278,657 - GFF2577 0.49 -1.6 278,660 - GFF2577 0.50 +0.1 278,660 - GFF2577 0.50 -0.0 278,660 - GFF2577 0.50 -0.3 278,687 + GFF2577 0.51 -0.6 278,687 + GFF2577 0.51 +0.6 278,687 + GFF2577 0.51 -0.0 278,687 + GFF2577 0.51 -0.0 278,687 + GFF2577 0.51 +0.1 278,687 + GFF2577 0.51 +0.4 278,687 + GFF2577 0.51 -0.0 278,687 + GFF2577 0.51 -1.0 278,687 + GFF2577 0.51 +0.7 278,687 + GFF2577 0.51 -0.6 278,687 + GFF2577 0.51 -0.7 278,687 + GFF2577 0.51 -0.0 278,687 + GFF2577 0.51 -0.0 278,687 + GFF2577 0.51 +0.2 278,687 + GFF2577 0.51 -1.9 278,688 - GFF2577 0.51 -0.2 278,688 - GFF2577 0.51 +0.2 278,688 - GFF2577 0.51 -1.8 278,688 - GFF2577 0.51 -1.5 278,689 + GFF2577 0.51 -1.8 278,689 + GFF2577 0.51 -1.0 278,690 - GFF2577 0.51 -1.1 278,714 + GFF2577 0.53 -0.3 278,714 + GFF2577 0.53 -0.0 278,715 - GFF2577 0.53 -0.8 278,715 - GFF2577 0.53 +0.6 278,727 - GFF2577 0.54 -0.3 278,727 - GFF2577 0.54 -0.3
Or see this region's nucleotide sequence