Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2434 and GFF2435 overlap by 4 nucleotides GFF2435 and GFF2436 overlap by 1 nucleotides GFF2436 and GFF2437 are separated by 131 nucleotides GFF2437 and GFF2438 overlap by 8 nucleotides
GFF2434 - Molybdopterin molybdenumtransferase, at 134,790 to 136,058
GFF2434
GFF2435 - Molybdenum cofactor guanylyltransferase, at 136,055 to 136,633
GFF2435
GFF2436 - GTP 3',8-cyclase, at 136,633 to 137,643
GFF2436
GFF2437 - hypothetical protein, at 137,775 to 138,254
GFF2437
GFF2438 - hypothetical protein, at 138,247 to 139,812
GFF2438
Position (kb) 136
137
138 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 135.785 kb on + strand, within GFF2434 at 135.866 kb on + strand, within GFF2434 at 135.875 kb on + strand, within GFF2434 at 135.959 kb on - strand at 135.959 kb on - strand at 135.997 kb on + strand at 135.997 kb on + strand at 135.998 kb on - strand at 135.998 kb on - strand at 135.998 kb on - strand at 135.998 kb on - strand at 136.036 kb on - strand at 136.038 kb on + strand at 136.038 kb on + strand at 136.038 kb on + strand at 136.039 kb on - strand at 136.121 kb on + strand, within GFF2435 at 136.121 kb on + strand, within GFF2435 at 136.121 kb on + strand, within GFF2435 at 136.122 kb on - strand, within GFF2435 at 136.464 kb on + strand, within GFF2435 at 136.465 kb on - strand, within GFF2435 at 136.625 kb on - strand at 136.625 kb on - strand at 136.654 kb on - strand at 136.738 kb on + strand, within GFF2436 at 136.739 kb on - strand, within GFF2436 at 136.739 kb on - strand, within GFF2436 at 136.739 kb on - strand, within GFF2436 at 136.813 kb on + strand, within GFF2436 at 136.814 kb on - strand, within GFF2436 at 136.814 kb on - strand, within GFF2436 at 136.819 kb on + strand, within GFF2436 at 136.819 kb on + strand, within GFF2436 at 136.836 kb on + strand, within GFF2436 at 136.876 kb on - strand, within GFF2436 at 136.887 kb on + strand, within GFF2436 at 136.887 kb on + strand, within GFF2436 at 136.887 kb on + strand, within GFF2436 at 136.888 kb on - strand, within GFF2436 at 136.888 kb on - strand, within GFF2436 at 136.888 kb on - strand, within GFF2436 at 136.925 kb on + strand, within GFF2436 at 136.953 kb on + strand, within GFF2436 at 136.954 kb on - strand, within GFF2436 at 136.954 kb on - strand, within GFF2436 at 136.954 kb on - strand, within GFF2436 at 136.975 kb on - strand, within GFF2436 at 136.981 kb on - strand, within GFF2436 at 136.981 kb on - strand, within GFF2436 at 136.981 kb on - strand, within GFF2436 at 137.061 kb on + strand, within GFF2436 at 137.070 kb on + strand, within GFF2436 at 137.070 kb on + strand, within GFF2436 at 137.071 kb on - strand, within GFF2436 at 137.071 kb on - strand, within GFF2436 at 137.074 kb on + strand, within GFF2436 at 137.074 kb on + strand, within GFF2436 at 137.075 kb on - strand, within GFF2436 at 137.075 kb on - strand, within GFF2436 at 137.075 kb on - strand, within GFF2436 at 137.075 kb on - strand, within GFF2436 at 137.075 kb on - strand, within GFF2436 at 137.075 kb on - strand, within GFF2436 at 137.156 kb on - strand, within GFF2436 at 137.156 kb on - strand, within GFF2436 at 137.209 kb on + strand, within GFF2436 at 137.209 kb on + strand, within GFF2436 at 137.269 kb on - strand, within GFF2436 at 137.269 kb on - strand, within GFF2436 at 137.269 kb on - strand, within GFF2436 at 137.309 kb on + strand, within GFF2436 at 137.310 kb on - strand, within GFF2436 at 137.310 kb on - strand, within GFF2436 at 137.314 kb on - strand, within GFF2436 at 137.314 kb on - strand, within GFF2436 at 137.338 kb on - strand, within GFF2436 at 137.449 kb on - strand, within GFF2436 at 137.510 kb on - strand, within GFF2436 at 137.538 kb on - strand, within GFF2436 at 137.578 kb on + strand at 137.578 kb on + strand at 137.578 kb on + strand at 137.578 kb on + strand at 137.578 kb on + strand at 137.578 kb on + strand at 137.578 kb on + strand at 137.578 kb on + strand at 137.578 kb on + strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.579 kb on - strand at 137.582 kb on + strand at 137.582 kb on + strand at 137.582 kb on + strand at 137.582 kb on + strand at 137.582 kb on + strand at 137.583 kb on - strand at 137.583 kb on - strand at 137.583 kb on - strand at 137.583 kb on - strand at 137.638 kb on - strand at 137.638 kb on - strand at 137.661 kb on - strand at 137.665 kb on + strand at 137.665 kb on + strand at 137.665 kb on + strand at 137.665 kb on + strand at 137.665 kb on + strand at 137.665 kb on + strand at 137.666 kb on - strand at 137.677 kb on + strand at 137.677 kb on + strand at 137.678 kb on - strand at 137.706 kb on - strand at 137.709 kb on + strand at 137.709 kb on + strand at 137.709 kb on + strand at 137.716 kb on + strand at 137.716 kb on + strand at 137.716 kb on + strand at 137.716 kb on + strand at 137.716 kb on + strand at 137.717 kb on - strand at 137.732 kb on + strand at 137.732 kb on + strand at 137.732 kb on + strand at 137.732 kb on + strand at 137.732 kb on + strand at 137.733 kb on - strand at 137.739 kb on + strand at 137.740 kb on - strand at 137.740 kb on - strand at 137.750 kb on + strand at 137.759 kb on - strand at 137.788 kb on + strand at 137.788 kb on + strand at 137.788 kb on + strand at 137.788 kb on + strand at 137.788 kb on + strand at 137.789 kb on - strand at 137.789 kb on - strand at 137.789 kb on - strand at 137.822 kb on + strand at 137.822 kb on + strand at 137.822 kb on + strand at 137.843 kb on - strand, within GFF2437 at 137.854 kb on + strand, within GFF2437 at 137.855 kb on - strand, within GFF2437 at 137.866 kb on + strand, within GFF2437 at 137.866 kb on + strand, within GFF2437 at 137.866 kb on + strand, within GFF2437 at 137.866 kb on + strand, within GFF2437 at 137.867 kb on - strand, within GFF2437 at 137.867 kb on - strand, within GFF2437 at 137.867 kb on - strand, within GFF2437 at 137.867 kb on - strand, within GFF2437 at 137.867 kb on - strand, within GFF2437 at 137.867 kb on - strand, within GFF2437 at 137.867 kb on - strand, within GFF2437 at 137.892 kb on + strand, within GFF2437 at 137.892 kb on + strand, within GFF2437 at 137.892 kb on + strand, within GFF2437 at 137.910 kb on + strand, within GFF2437 at 137.973 kb on + strand, within GFF2437 at 137.974 kb on - strand, within GFF2437 at 137.974 kb on - strand, within GFF2437 at 138.073 kb on + strand, within GFF2437 at 138.073 kb on + strand, within GFF2437 at 138.073 kb on + strand, within GFF2437 at 138.085 kb on + strand, within GFF2437 at 138.086 kb on - strand, within GFF2437 at 138.096 kb on + strand, within GFF2437 at 138.096 kb on + strand, within GFF2437 at 138.097 kb on - strand, within GFF2437 at 138.141 kb on + strand, within GFF2437 at 138.141 kb on + strand, within GFF2437 at 138.141 kb on + strand, within GFF2437 at 138.142 kb on - strand, within GFF2437 at 138.142 kb on - strand, within GFF2437 at 138.153 kb on - strand, within GFF2437 at 138.176 kb on + strand, within GFF2437 at 138.195 kb on + strand, within GFF2437 at 138.196 kb on - strand, within GFF2437 at 138.196 kb on - strand, within GFF2437 at 138.210 kb on - strand at 138.241 kb on + strand at 138.241 kb on + strand at 138.241 kb on + strand at 138.241 kb on + strand at 138.241 kb on + strand at 138.241 kb on + strand at 138.241 kb on + strand at 138.242 kb on - strand at 138.242 kb on - strand at 138.259 kb on + strand at 138.259 kb on + strand at 138.259 kb on + strand at 138.259 kb on + strand at 138.259 kb on + strand at 138.259 kb on + strand at 138.259 kb on + strand at 138.259 kb on + strand at 138.259 kb on + strand at 138.260 kb on - strand at 138.260 kb on - strand at 138.351 kb on + strand at 138.351 kb on + strand at 138.352 kb on - strand at 138.352 kb on - strand at 138.364 kb on - strand at 138.402 kb on - strand at 138.402 kb on - strand at 138.407 kb on + strand, within GFF2438 at 138.407 kb on + strand, within GFF2438 at 138.408 kb on - strand, within GFF2438 at 138.483 kb on + strand, within GFF2438 at 138.521 kb on + strand, within GFF2438 at 138.521 kb on + strand, within GFF2438 at 138.521 kb on + strand, within GFF2438 at 138.521 kb on + strand, within GFF2438 at 138.521 kb on + strand, within GFF2438 at 138.521 kb on + strand, within GFF2438 at 138.522 kb on - strand, within GFF2438 at 138.522 kb on - strand, within GFF2438 at 138.522 kb on - strand, within GFF2438 at 138.524 kb on - strand, within GFF2438 at 138.524 kb on - strand, within GFF2438 at 138.524 kb on - strand, within GFF2438 at 138.524 kb on - strand, within GFF2438 at 138.619 kb on + strand, within GFF2438 at 138.620 kb on - strand, within GFF2438 at 138.620 kb on - strand, within GFF2438 at 138.620 kb on - strand, within GFF2438
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 135,785 + GFF2434 0.78 -1.6 135,866 + GFF2434 0.85 +0.4 135,875 + GFF2434 0.86 -0.0 135,959 - -1.3 135,959 - -1.2 135,997 + -1.0 135,997 + -0.0 135,998 - -2.0 135,998 - -0.6 135,998 - -1.8 135,998 - -0.7 136,036 - -1.0 136,038 + -1.4 136,038 + -1.7 136,038 + -0.3 136,039 - -0.9 136,121 + GFF2435 0.11 -0.6 136,121 + GFF2435 0.11 -2.0 136,121 + GFF2435 0.11 -0.6 136,122 - GFF2435 0.12 -0.2 136,464 + GFF2435 0.71 -0.7 136,465 - GFF2435 0.71 -0.9 136,625 - +1.0 136,625 - -1.0 136,654 - -0.9 136,738 + GFF2436 0.10 -0.0 136,739 - GFF2436 0.10 -1.3 136,739 - GFF2436 0.10 -1.2 136,739 - GFF2436 0.10 -1.3 136,813 + GFF2436 0.18 -1.5 136,814 - GFF2436 0.18 +0.4 136,814 - GFF2436 0.18 -2.2 136,819 + GFF2436 0.18 -1.8 136,819 + GFF2436 0.18 -1.8 136,836 + GFF2436 0.20 -0.8 136,876 - GFF2436 0.24 -1.3 136,887 + GFF2436 0.25 -0.8 136,887 + GFF2436 0.25 -0.3 136,887 + GFF2436 0.25 -0.3 136,888 - GFF2436 0.25 -1.6 136,888 - GFF2436 0.25 +0.7 136,888 - GFF2436 0.25 +0.3 136,925 + GFF2436 0.29 +0.7 136,953 + GFF2436 0.32 +0.3 136,954 - GFF2436 0.32 -1.2 136,954 - GFF2436 0.32 -2.0 136,954 - GFF2436 0.32 -1.0 136,975 - GFF2436 0.34 -1.1 136,981 - GFF2436 0.34 -0.5 136,981 - GFF2436 0.34 +0.4 136,981 - GFF2436 0.34 -1.5 137,061 + GFF2436 0.42 -1.6 137,070 + GFF2436 0.43 +0.3 137,070 + GFF2436 0.43 +0.3 137,071 - GFF2436 0.43 -0.4 137,071 - GFF2436 0.43 -0.1 137,074 + GFF2436 0.44 -0.8 137,074 + GFF2436 0.44 +1.0 137,075 - GFF2436 0.44 -1.0 137,075 - GFF2436 0.44 -0.4 137,075 - GFF2436 0.44 +0.6 137,075 - GFF2436 0.44 -1.0 137,075 - GFF2436 0.44 -1.3 137,075 - GFF2436 0.44 -0.7 137,156 - GFF2436 0.52 -0.6 137,156 - GFF2436 0.52 -1.0 137,209 + GFF2436 0.57 -1.9 137,209 + GFF2436 0.57 -0.7 137,269 - GFF2436 0.63 -0.6 137,269 - GFF2436 0.63 -2.0 137,269 - GFF2436 0.63 -1.6 137,309 + GFF2436 0.67 -1.0 137,310 - GFF2436 0.67 -2.6 137,310 - GFF2436 0.67 -1.4 137,314 - GFF2436 0.67 -3.3 137,314 - GFF2436 0.67 -0.0 137,338 - GFF2436 0.70 +0.3 137,449 - GFF2436 0.81 -1.1 137,510 - GFF2436 0.87 -1.8 137,538 - GFF2436 0.90 -2.1 137,578 + +1.0 137,578 + -1.0 137,578 + -1.4 137,578 + -2.0 137,578 + -1.0 137,578 + -0.0 137,578 + +0.2 137,578 + -2.0 137,578 + -1.8 137,579 - +0.2 137,579 - -0.3 137,579 - -0.4 137,579 - -0.4 137,579 - -1.5 137,579 - +0.3 137,579 - -0.3 137,579 - -1.9 137,579 - -0.6 137,579 - -1.0 137,582 + -1.0 137,582 + -1.0 137,582 + -1.0 137,582 + -2.2 137,582 + +1.6 137,583 - +0.4 137,583 - -0.2 137,583 - -0.3 137,583 - -2.0 137,638 - -0.5 137,638 - -1.2 137,661 - +0.2 137,665 + -0.4 137,665 + -0.2 137,665 + +0.7 137,665 + -0.4 137,665 + -0.4 137,665 + -2.3 137,666 - +0.1 137,677 + +0.6 137,677 + -1.2 137,678 - -0.9 137,706 - -1.5 137,709 + -0.9 137,709 + +1.0 137,709 + -2.3 137,716 + -0.6 137,716 + -0.0 137,716 + -0.0 137,716 + -2.0 137,716 + +0.4 137,717 - -1.4 137,732 + -0.1 137,732 + -0.3 137,732 + +0.2 137,732 + -0.5 137,732 + -0.4 137,733 - -0.4 137,739 + -1.3 137,740 - -0.2 137,740 - +1.0 137,750 + +0.3 137,759 - -0.5 137,788 + -1.8 137,788 + -0.5 137,788 + -2.6 137,788 + +1.4 137,788 + +0.3 137,789 - -0.9 137,789 - -0.1 137,789 - +0.2 137,822 + -2.2 137,822 + -0.0 137,822 + -1.6 137,843 - GFF2437 0.14 -0.1 137,854 + GFF2437 0.16 +1.0 137,855 - GFF2437 0.17 -0.3 137,866 + GFF2437 0.19 +0.1 137,866 + GFF2437 0.19 -1.0 137,866 + GFF2437 0.19 -0.0 137,866 + GFF2437 0.19 +0.2 137,867 - GFF2437 0.19 -1.3 137,867 - GFF2437 0.19 +0.6 137,867 - GFF2437 0.19 -0.0 137,867 - GFF2437 0.19 +1.0 137,867 - GFF2437 0.19 -0.9 137,867 - GFF2437 0.19 -0.9 137,867 - GFF2437 0.19 -0.2 137,892 + GFF2437 0.24 -0.3 137,892 + GFF2437 0.24 -0.2 137,892 + GFF2437 0.24 -0.4 137,910 + GFF2437 0.28 -1.3 137,973 + GFF2437 0.41 -2.5 137,974 - GFF2437 0.41 -0.7 137,974 - GFF2437 0.41 -0.2 138,073 + GFF2437 0.62 +0.6 138,073 + GFF2437 0.62 -0.6 138,073 + GFF2437 0.62 -0.3 138,085 + GFF2437 0.65 -1.4 138,086 - GFF2437 0.65 -0.1 138,096 + GFF2437 0.67 +0.1 138,096 + GFF2437 0.67 -0.6 138,097 - GFF2437 0.67 -0.0 138,141 + GFF2437 0.76 -0.5 138,141 + GFF2437 0.76 +0.7 138,141 + GFF2437 0.76 -1.0 138,142 - GFF2437 0.76 -0.0 138,142 - GFF2437 0.76 +0.6 138,153 - GFF2437 0.79 -1.0 138,176 + GFF2437 0.84 -0.0 138,195 + GFF2437 0.88 -1.0 138,196 - GFF2437 0.88 -2.3 138,196 - GFF2437 0.88 +0.1 138,210 - -0.2 138,241 + +0.8 138,241 + -2.2 138,241 + -0.9 138,241 + -1.0 138,241 + -1.0 138,241 + -1.0 138,241 + -1.5 138,242 - +1.3 138,242 - +0.7 138,259 + +1.6 138,259 + -0.0 138,259 + -0.3 138,259 + -1.6 138,259 + +0.2 138,259 + -0.0 138,259 + +0.7 138,259 + +0.7 138,259 + -0.1 138,260 - -0.0 138,260 - +0.3 138,351 + -0.6 138,351 + -1.0 138,352 - -1.6 138,352 - +0.6 138,364 - -1.2 138,402 - -1.0 138,402 - +0.2 138,407 + GFF2438 0.10 -0.0 138,407 + GFF2438 0.10 +0.4 138,408 - GFF2438 0.10 -1.3 138,483 + GFF2438 0.15 -0.0 138,521 + GFF2438 0.17 +1.3 138,521 + GFF2438 0.17 +0.2 138,521 + GFF2438 0.17 +0.2 138,521 + GFF2438 0.17 -0.5 138,521 + GFF2438 0.17 +0.1 138,521 + GFF2438 0.17 -0.5 138,522 - GFF2438 0.18 -0.0 138,522 - GFF2438 0.18 -0.8 138,522 - GFF2438 0.18 +0.6 138,524 - GFF2438 0.18 +0.3 138,524 - GFF2438 0.18 -0.6 138,524 - GFF2438 0.18 -1.0 138,524 - GFF2438 0.18 -0.4 138,619 + GFF2438 0.24 -0.4 138,620 - GFF2438 0.24 -1.8 138,620 - GFF2438 0.24 +0.8 138,620 - GFF2438 0.24 -1.6
Or see this region's nucleotide sequence