Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2189 and GFF2190 are separated by 143 nucleotides GFF2190 and GFF2191 are separated by 289 nucleotides GFF2191 and GFF2192 are separated by 159 nucleotides
GFF2189 - hypothetical protein, at 239,252 to 239,359
GFF2189
GFF2190 - hypothetical protein, at 239,503 to 239,910
GFF2190
GFF2191 - Phosphomethylpyrimidine synthase, at 240,200 to 242,080
GFF2191
GFF2192 - hypothetical protein, at 242,240 to 243,895
GFF2192
Position (kb) 240
241
242
243 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 239.233 kb on + strand at 239.242 kb on + strand at 239.242 kb on + strand at 239.242 kb on + strand at 239.242 kb on + strand at 239.243 kb on - strand at 239.243 kb on - strand at 239.253 kb on + strand at 239.330 kb on + strand, within GFF2189 at 239.331 kb on - strand, within GFF2189 at 239.336 kb on + strand, within GFF2189 at 239.340 kb on - strand, within GFF2189 at 239.340 kb on - strand, within GFF2189 at 239.387 kb on + strand at 239.388 kb on - strand at 239.388 kb on - strand at 239.428 kb on + strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.458 kb on + strand at 239.489 kb on - strand at 239.489 kb on - strand at 239.489 kb on - strand at 239.497 kb on + strand at 239.497 kb on + strand at 239.497 kb on + strand at 239.498 kb on - strand at 239.547 kb on + strand, within GFF2190 at 239.585 kb on + strand, within GFF2190 at 239.585 kb on + strand, within GFF2190 at 239.586 kb on - strand, within GFF2190 at 239.690 kb on + strand, within GFF2190 at 239.690 kb on + strand, within GFF2190 at 239.691 kb on - strand, within GFF2190 at 239.701 kb on + strand, within GFF2190 at 239.701 kb on + strand, within GFF2190 at 239.702 kb on - strand, within GFF2190 at 239.702 kb on - strand, within GFF2190 at 239.751 kb on + strand, within GFF2190 at 239.787 kb on + strand, within GFF2190 at 239.787 kb on + strand, within GFF2190 at 239.787 kb on + strand, within GFF2190 at 239.787 kb on + strand, within GFF2190 at 239.787 kb on + strand, within GFF2190 at 239.787 kb on + strand, within GFF2190 at 239.788 kb on - strand, within GFF2190 at 239.788 kb on - strand, within GFF2190 at 239.788 kb on - strand, within GFF2190 at 239.789 kb on + strand, within GFF2190 at 239.790 kb on - strand, within GFF2190 at 239.812 kb on + strand, within GFF2190 at 239.812 kb on + strand, within GFF2190 at 239.812 kb on + strand, within GFF2190 at 239.812 kb on + strand, within GFF2190 at 239.812 kb on + strand, within GFF2190 at 239.812 kb on + strand, within GFF2190 at 239.813 kb on - strand, within GFF2190 at 239.814 kb on + strand, within GFF2190 at 239.877 kb on + strand at 239.877 kb on + strand at 239.877 kb on + strand at 239.877 kb on - strand at 239.878 kb on - strand at 239.878 kb on - strand at 239.893 kb on + strand at 239.893 kb on + strand at 239.893 kb on + strand at 239.893 kb on + strand at 239.894 kb on - strand at 239.894 kb on - strand at 239.896 kb on + strand at 239.896 kb on + strand at 239.897 kb on - strand at 239.897 kb on - strand at 239.899 kb on + strand at 239.899 kb on + strand at 239.900 kb on - strand at 239.900 kb on - strand at 239.900 kb on - strand at 239.910 kb on + strand at 239.910 kb on + strand at 239.910 kb on + strand at 239.911 kb on - strand at 239.911 kb on - strand at 239.911 kb on - strand at 239.932 kb on - strand at 240.026 kb on + strand at 240.083 kb on + strand at 240.083 kb on + strand at 240.116 kb on + strand at 240.174 kb on + strand at 240.174 kb on + strand at 240.174 kb on + strand at 240.188 kb on + strand at 240.188 kb on + strand at 240.189 kb on - strand at 240.198 kb on + strand at 240.199 kb on - strand at 240.214 kb on + strand at 240.214 kb on + strand at 240.214 kb on + strand at 240.214 kb on + strand at 240.214 kb on + strand at 240.215 kb on - strand at 240.215 kb on - strand at 240.215 kb on - strand at 240.215 kb on - strand at 240.262 kb on + strand at 240.262 kb on + strand at 240.293 kb on + strand at 240.353 kb on - strand at 240.398 kb on + strand, within GFF2191 at 240.398 kb on + strand, within GFF2191 at 240.398 kb on + strand, within GFF2191 at 240.398 kb on + strand, within GFF2191 at 240.398 kb on + strand, within GFF2191 at 240.398 kb on + strand, within GFF2191 at 240.399 kb on - strand, within GFF2191 at 240.399 kb on - strand, within GFF2191 at 240.399 kb on - strand, within GFF2191 at 240.399 kb on - strand, within GFF2191 at 240.416 kb on + strand, within GFF2191 at 240.416 kb on + strand, within GFF2191 at 240.416 kb on + strand, within GFF2191 at 240.416 kb on + strand, within GFF2191 at 240.432 kb on + strand, within GFF2191 at 240.432 kb on + strand, within GFF2191 at 240.433 kb on - strand, within GFF2191 at 240.433 kb on - strand, within GFF2191 at 240.433 kb on - strand, within GFF2191 at 240.498 kb on + strand, within GFF2191 at 240.498 kb on + strand, within GFF2191 at 240.498 kb on + strand, within GFF2191 at 240.499 kb on - strand, within GFF2191 at 240.632 kb on + strand, within GFF2191 at 240.633 kb on - strand, within GFF2191 at 240.743 kb on + strand, within GFF2191 at 240.743 kb on + strand, within GFF2191 at 240.743 kb on + strand, within GFF2191 at 240.743 kb on + strand, within GFF2191 at 240.744 kb on - strand, within GFF2191 at 240.744 kb on - strand, within GFF2191 at 240.814 kb on + strand, within GFF2191 at 240.856 kb on + strand, within GFF2191 at 240.856 kb on + strand, within GFF2191 at 240.857 kb on - strand, within GFF2191 at 240.945 kb on + strand, within GFF2191 at 240.945 kb on + strand, within GFF2191 at 240.945 kb on + strand, within GFF2191 at 240.946 kb on - strand, within GFF2191 at 240.970 kb on + strand, within GFF2191 at 240.994 kb on + strand, within GFF2191 at 241.052 kb on - strand, within GFF2191 at 241.060 kb on + strand, within GFF2191 at 241.061 kb on - strand, within GFF2191 at 241.065 kb on - strand, within GFF2191 at 241.155 kb on + strand, within GFF2191 at 241.155 kb on + strand, within GFF2191 at 241.155 kb on + strand, within GFF2191 at 241.155 kb on + strand, within GFF2191 at 241.193 kb on + strand, within GFF2191 at 241.193 kb on + strand, within GFF2191 at 241.193 kb on + strand, within GFF2191 at 241.194 kb on - strand, within GFF2191 at 241.194 kb on - strand, within GFF2191 at 241.194 kb on - strand, within GFF2191 at 241.194 kb on - strand, within GFF2191 at 241.194 kb on - strand, within GFF2191 at 241.246 kb on + strand, within GFF2191 at 241.246 kb on + strand, within GFF2191 at 241.247 kb on - strand, within GFF2191 at 241.247 kb on - strand, within GFF2191 at 241.276 kb on + strand, within GFF2191 at 241.276 kb on + strand, within GFF2191 at 241.277 kb on - strand, within GFF2191 at 241.292 kb on + strand, within GFF2191 at 241.292 kb on + strand, within GFF2191 at 241.293 kb on - strand, within GFF2191 at 241.294 kb on + strand, within GFF2191 at 241.295 kb on - strand, within GFF2191 at 241.331 kb on + strand, within GFF2191 at 241.332 kb on - strand, within GFF2191 at 241.332 kb on - strand, within GFF2191 at 241.375 kb on + strand, within GFF2191 at 241.376 kb on - strand, within GFF2191 at 241.379 kb on + strand, within GFF2191 at 241.379 kb on + strand, within GFF2191 at 241.379 kb on + strand, within GFF2191 at 241.379 kb on + strand, within GFF2191 at 241.379 kb on + strand, within GFF2191 at 241.379 kb on + strand, within GFF2191 at 241.380 kb on - strand, within GFF2191 at 241.380 kb on - strand, within GFF2191 at 241.380 kb on - strand, within GFF2191 at 241.380 kb on - strand, within GFF2191 at 241.380 kb on - strand, within GFF2191 at 241.492 kb on + strand, within GFF2191 at 241.492 kb on + strand, within GFF2191 at 241.492 kb on + strand, within GFF2191 at 241.493 kb on - strand, within GFF2191 at 241.493 kb on - strand, within GFF2191 at 241.592 kb on + strand, within GFF2191 at 241.593 kb on - strand, within GFF2191 at 241.603 kb on + strand, within GFF2191 at 241.603 kb on + strand, within GFF2191 at 241.603 kb on + strand, within GFF2191 at 241.603 kb on + strand, within GFF2191 at 241.604 kb on - strand, within GFF2191 at 241.604 kb on - strand, within GFF2191 at 241.637 kb on + strand, within GFF2191 at 241.658 kb on + strand, within GFF2191 at 241.659 kb on - strand, within GFF2191 at 241.659 kb on - strand, within GFF2191 at 241.659 kb on - strand, within GFF2191 at 241.659 kb on - strand, within GFF2191 at 241.720 kb on + strand, within GFF2191 at 241.720 kb on + strand, within GFF2191 at 241.721 kb on - strand, within GFF2191 at 241.725 kb on - strand, within GFF2191 at 241.835 kb on - strand, within GFF2191 at 241.981 kb on + strand at 242.094 kb on + strand at 242.094 kb on + strand at 242.094 kb on + strand at 242.095 kb on - strand at 242.095 kb on - strand at 242.095 kb on - strand at 242.095 kb on - strand at 242.095 kb on - strand at 242.151 kb on + strand at 242.152 kb on - strand at 242.204 kb on + strand at 242.204 kb on + strand at 242.205 kb on - strand at 242.205 kb on - strand at 242.263 kb on + strand at 242.264 kb on - strand at 242.264 kb on - strand at 242.338 kb on - strand at 242.424 kb on + strand, within GFF2192 at 242.424 kb on + strand, within GFF2192 at 242.424 kb on + strand, within GFF2192 at 242.425 kb on - strand, within GFF2192 at 242.425 kb on - strand, within GFF2192 at 242.425 kb on - strand, within GFF2192 at 242.425 kb on - strand, within GFF2192 at 242.425 kb on - strand, within GFF2192 at 242.458 kb on + strand, within GFF2192 at 242.459 kb on - strand, within GFF2192 at 242.459 kb on - strand, within GFF2192 at 242.602 kb on + strand, within GFF2192 at 242.603 kb on - strand, within GFF2192 at 242.628 kb on + strand, within GFF2192 at 242.628 kb on + strand, within GFF2192 at 242.629 kb on - strand, within GFF2192 at 242.629 kb on - strand, within GFF2192 at 242.630 kb on + strand, within GFF2192 at 242.631 kb on - strand, within GFF2192 at 242.631 kb on - strand, within GFF2192 at 242.644 kb on + strand, within GFF2192 at 242.717 kb on + strand, within GFF2192 at 242.930 kb on + strand, within GFF2192 at 242.931 kb on - strand, within GFF2192 at 242.931 kb on - strand, within GFF2192 at 242.972 kb on + strand, within GFF2192 at 242.996 kb on + strand, within GFF2192 at 242.996 kb on + strand, within GFF2192 at 242.996 kb on + strand, within GFF2192 at 242.997 kb on - strand, within GFF2192 at 243.019 kb on + strand, within GFF2192 at 243.019 kb on + strand, within GFF2192 at 243.019 kb on + strand, within GFF2192 at 243.019 kb on + strand, within GFF2192 at 243.019 kb on + strand, within GFF2192 at 243.020 kb on - strand, within GFF2192 at 243.079 kb on + strand, within GFF2192 at 243.079 kb on + strand, within GFF2192 at 243.079 kb on + strand, within GFF2192 at 243.080 kb on - strand, within GFF2192
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 239,233 + -1.9 239,242 + +1.3 239,242 + -0.9 239,242 + -0.4 239,242 + +0.1 239,243 - -0.2 239,243 - -0.6 239,253 + +0.4 239,330 + GFF2189 0.72 +0.5 239,331 - GFF2189 0.73 -1.2 239,336 + GFF2189 0.78 -0.2 239,340 - GFF2189 0.81 -1.4 239,340 - GFF2189 0.81 -0.1 239,387 + -0.5 239,388 - +0.2 239,388 - -0.4 239,428 + +1.3 239,429 - -0.5 239,429 - -2.1 239,458 + -0.6 239,489 - -1.1 239,489 - +1.5 239,489 - +0.3 239,497 + +0.7 239,497 + -1.3 239,497 + +0.5 239,498 - -0.2 239,547 + GFF2190 0.11 +0.5 239,585 + GFF2190 0.20 -1.4 239,585 + GFF2190 0.20 +0.7 239,586 - GFF2190 0.20 -0.6 239,690 + GFF2190 0.46 -1.9 239,690 + GFF2190 0.46 +0.4 239,691 - GFF2190 0.46 -0.1 239,701 + GFF2190 0.49 +1.9 239,701 + GFF2190 0.49 +0.5 239,702 - GFF2190 0.49 -0.5 239,702 - GFF2190 0.49 -0.2 239,751 + GFF2190 0.61 +0.1 239,787 + GFF2190 0.70 +0.1 239,787 + GFF2190 0.70 -0.1 239,787 + GFF2190 0.70 +0.6 239,787 + GFF2190 0.70 -0.3 239,787 + GFF2190 0.70 -2.4 239,787 + GFF2190 0.70 +0.9 239,788 - GFF2190 0.70 -1.1 239,788 - GFF2190 0.70 +0.1 239,788 - GFF2190 0.70 -0.6 239,789 + GFF2190 0.70 -0.3 239,790 - GFF2190 0.70 -1.1 239,812 + GFF2190 0.76 -0.6 239,812 + GFF2190 0.76 -1.4 239,812 + GFF2190 0.76 -0.1 239,812 + GFF2190 0.76 -0.2 239,812 + GFF2190 0.76 -0.6 239,812 + GFF2190 0.76 -1.5 239,813 - GFF2190 0.76 -1.6 239,814 + GFF2190 0.76 -0.6 239,877 + +0.7 239,877 + -0.2 239,877 + +0.2 239,877 - -0.9 239,878 - +0.9 239,878 - +0.5 239,893 + -0.5 239,893 + -0.1 239,893 + -0.2 239,893 + -0.9 239,894 - +0.9 239,894 - +1.2 239,896 + -1.1 239,896 + -0.6 239,897 - -0.1 239,897 - -1.1 239,899 + +0.9 239,899 + -0.5 239,900 - -0.8 239,900 - -0.4 239,900 - -0.0 239,910 + +0.8 239,910 + -1.2 239,910 + -1.1 239,911 - -0.2 239,911 - -1.2 239,911 - -0.3 239,932 - +0.5 240,026 + -0.5 240,083 + -0.1 240,083 + +0.4 240,116 + +0.4 240,174 + -1.4 240,174 + -0.5 240,174 + -0.2 240,188 + -0.7 240,188 + -1.1 240,189 - +0.2 240,198 + +0.5 240,199 - -1.4 240,214 + +0.6 240,214 + -0.3 240,214 + -1.9 240,214 + -0.2 240,214 + -3.1 240,215 - -3.1 240,215 - -1.1 240,215 - -1.4 240,215 - -1.1 240,262 + -1.2 240,262 + -0.7 240,293 + +0.1 240,353 - -1.1 240,398 + GFF2191 0.11 -1.1 240,398 + GFF2191 0.11 -1.3 240,398 + GFF2191 0.11 -1.1 240,398 + GFF2191 0.11 -1.4 240,398 + GFF2191 0.11 -0.3 240,398 + GFF2191 0.11 +1.3 240,399 - GFF2191 0.11 -0.7 240,399 - GFF2191 0.11 -1.3 240,399 - GFF2191 0.11 -1.1 240,399 - GFF2191 0.11 +0.1 240,416 + GFF2191 0.11 -0.6 240,416 + GFF2191 0.11 +0.4 240,416 + GFF2191 0.11 -0.6 240,416 + GFF2191 0.11 -2.0 240,432 + GFF2191 0.12 -0.8 240,432 + GFF2191 0.12 -1.4 240,433 - GFF2191 0.12 -1.3 240,433 - GFF2191 0.12 -1.9 240,433 - GFF2191 0.12 -2.2 240,498 + GFF2191 0.16 -1.6 240,498 + GFF2191 0.16 -0.5 240,498 + GFF2191 0.16 -2.9 240,499 - GFF2191 0.16 -1.0 240,632 + GFF2191 0.23 -1.7 240,633 - GFF2191 0.23 -0.4 240,743 + GFF2191 0.29 -0.6 240,743 + GFF2191 0.29 -0.4 240,743 + GFF2191 0.29 -1.6 240,743 + GFF2191 0.29 -0.7 240,744 - GFF2191 0.29 -0.0 240,744 - GFF2191 0.29 -1.1 240,814 + GFF2191 0.33 -1.5 240,856 + GFF2191 0.35 -2.4 240,856 + GFF2191 0.35 -1.9 240,857 - GFF2191 0.35 -1.1 240,945 + GFF2191 0.40 -1.5 240,945 + GFF2191 0.40 -2.3 240,945 + GFF2191 0.40 -2.1 240,946 - GFF2191 0.40 -0.3 240,970 + GFF2191 0.41 -0.6 240,994 + GFF2191 0.42 -0.7 241,052 - GFF2191 0.45 -1.1 241,060 + GFF2191 0.46 -1.9 241,061 - GFF2191 0.46 -1.0 241,065 - GFF2191 0.46 -1.7 241,155 + GFF2191 0.51 -3.4 241,155 + GFF2191 0.51 -0.4 241,155 + GFF2191 0.51 +0.4 241,155 + GFF2191 0.51 -0.6 241,193 + GFF2191 0.53 -1.1 241,193 + GFF2191 0.53 -1.2 241,193 + GFF2191 0.53 -0.6 241,194 - GFF2191 0.53 -1.5 241,194 - GFF2191 0.53 -1.2 241,194 - GFF2191 0.53 +0.6 241,194 - GFF2191 0.53 -2.2 241,194 - GFF2191 0.53 -1.1 241,246 + GFF2191 0.56 -0.9 241,246 + GFF2191 0.56 -2.6 241,247 - GFF2191 0.56 -0.4 241,247 - GFF2191 0.56 -0.6 241,276 + GFF2191 0.57 -0.2 241,276 + GFF2191 0.57 -1.9 241,277 - GFF2191 0.57 -1.1 241,292 + GFF2191 0.58 -0.4 241,292 + GFF2191 0.58 -0.4 241,293 - GFF2191 0.58 -1.6 241,294 + GFF2191 0.58 -0.9 241,295 - GFF2191 0.58 -0.6 241,331 + GFF2191 0.60 -1.6 241,332 - GFF2191 0.60 -1.5 241,332 - GFF2191 0.60 -0.1 241,375 + GFF2191 0.62 -2.0 241,376 - GFF2191 0.63 -1.2 241,379 + GFF2191 0.63 +0.2 241,379 + GFF2191 0.63 -0.3 241,379 + GFF2191 0.63 -1.8 241,379 + GFF2191 0.63 +0.4 241,379 + GFF2191 0.63 -0.8 241,379 + GFF2191 0.63 -0.5 241,380 - GFF2191 0.63 -1.1 241,380 - GFF2191 0.63 -2.1 241,380 - GFF2191 0.63 -0.9 241,380 - GFF2191 0.63 -0.9 241,380 - GFF2191 0.63 -1.1 241,492 + GFF2191 0.69 -1.2 241,492 + GFF2191 0.69 -2.9 241,492 + GFF2191 0.69 -1.4 241,493 - GFF2191 0.69 -0.3 241,493 - GFF2191 0.69 -1.2 241,592 + GFF2191 0.74 -1.6 241,593 - GFF2191 0.74 -1.8 241,603 + GFF2191 0.75 -2.8 241,603 + GFF2191 0.75 -0.3 241,603 + GFF2191 0.75 -2.1 241,603 + GFF2191 0.75 -1.4 241,604 - GFF2191 0.75 -2.4 241,604 - GFF2191 0.75 -0.5 241,637 + GFF2191 0.76 -1.1 241,658 + GFF2191 0.78 -1.0 241,659 - GFF2191 0.78 -0.4 241,659 - GFF2191 0.78 -0.6 241,659 - GFF2191 0.78 -1.2 241,659 - GFF2191 0.78 -2.2 241,720 + GFF2191 0.81 -2.1 241,720 + GFF2191 0.81 -0.3 241,721 - GFF2191 0.81 -0.1 241,725 - GFF2191 0.81 -0.8 241,835 - GFF2191 0.87 -1.2 241,981 + -0.1 242,094 + -1.2 242,094 + -0.6 242,094 + +0.2 242,095 - -0.2 242,095 - -0.4 242,095 - -0.1 242,095 - -2.0 242,095 - -0.4 242,151 + -1.6 242,152 - +0.1 242,204 + +0.1 242,204 + +0.2 242,205 - +0.4 242,205 - +0.4 242,263 + -0.2 242,264 - -0.6 242,264 - -0.6 242,338 - -1.3 242,424 + GFF2192 0.11 -0.9 242,424 + GFF2192 0.11 -0.4 242,424 + GFF2192 0.11 -0.6 242,425 - GFF2192 0.11 -1.4 242,425 - GFF2192 0.11 +0.9 242,425 - GFF2192 0.11 -0.2 242,425 - GFF2192 0.11 -1.1 242,425 - GFF2192 0.11 -1.1 242,458 + GFF2192 0.13 -0.1 242,459 - GFF2192 0.13 -0.1 242,459 - GFF2192 0.13 -0.4 242,602 + GFF2192 0.22 -0.9 242,603 - GFF2192 0.22 -1.9 242,628 + GFF2192 0.23 -1.9 242,628 + GFF2192 0.23 +0.3 242,629 - GFF2192 0.23 -0.9 242,629 - GFF2192 0.23 -0.8 242,630 + GFF2192 0.24 +0.8 242,631 - GFF2192 0.24 -2.2 242,631 - GFF2192 0.24 -1.9 242,644 + GFF2192 0.24 -1.6 242,717 + GFF2192 0.29 -2.2 242,930 + GFF2192 0.42 -0.3 242,931 - GFF2192 0.42 +0.5 242,931 - GFF2192 0.42 -2.2 242,972 + GFF2192 0.44 +0.5 242,996 + GFF2192 0.46 +0.9 242,996 + GFF2192 0.46 -1.4 242,996 + GFF2192 0.46 -0.1 242,997 - GFF2192 0.46 -0.1 243,019 + GFF2192 0.47 +0.5 243,019 + GFF2192 0.47 +1.3 243,019 + GFF2192 0.47 -0.1 243,019 + GFF2192 0.47 -1.9 243,019 + GFF2192 0.47 -0.7 243,020 - GFF2192 0.47 +0.6 243,079 + GFF2192 0.51 +0.4 243,079 + GFF2192 0.51 -1.9 243,079 + GFF2192 0.51 +1.1 243,080 - GFF2192 0.51 +0.2
Or see this region's nucleotide sequence