Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1683 and GFF1684 overlap by 4 nucleotides GFF1684 and GFF1685 are separated by 0 nucleotides GFF1685 and GFF1686 overlap by 1 nucleotides GFF1686 and GFF1687 are separated by 0 nucleotides
GFF1683 - 8-amino-7-oxononanoate synthase, at 319,570 to 320,754
GFF1683
GFF1684 - Pimeloyl-[acyl-carrier protein] methyl ester esterase, at 320,751 to 321,542
GFF1684
GFF1685 - Malonyl-[acyl-carrier protein] O-methyltransferase, at 321,543 to 322,421
GFF1685
GFF1686 - ATP-dependent dethiobiotin synthetase BioD 1, at 322,421 to 323,065
GFF1686
GFF1687 - Rhomboid protease GluP, at 323,066 to 324,118
GFF1687
Position (kb) 321
322
323 Strain fitness (log2 ratio) -2
-1
0
1 at 320.732 kb on + strand at 322.330 kb on + strand, within GFF1685 at 322.330 kb on + strand, within GFF1685 at 322.330 kb on + strand, within GFF1685 at 322.330 kb on + strand, within GFF1685 at 322.330 kb on + strand, within GFF1685 at 322.331 kb on - strand, within GFF1685 at 323.063 kb on + strand at 323.200 kb on + strand, within GFF1687 at 323.200 kb on + strand, within GFF1687 at 323.200 kb on + strand, within GFF1687 at 323.205 kb on + strand, within GFF1687 at 323.205 kb on + strand, within GFF1687 at 323.205 kb on + strand, within GFF1687 at 323.205 kb on + strand, within GFF1687 at 323.283 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.314 kb on + strand, within GFF1687 at 323.315 kb on - strand, within GFF1687 at 323.315 kb on - strand, within GFF1687 at 323.315 kb on - strand, within GFF1687 at 323.315 kb on - strand, within GFF1687 at 323.315 kb on - strand, within GFF1687 at 323.315 kb on - strand, within GFF1687 at 323.315 kb on - strand, within GFF1687 at 323.384 kb on + strand, within GFF1687 at 323.385 kb on - strand, within GFF1687 at 323.385 kb on - strand, within GFF1687 at 323.398 kb on + strand, within GFF1687 at 323.400 kb on + strand, within GFF1687 at 323.400 kb on + strand, within GFF1687 at 323.400 kb on + strand, within GFF1687 at 323.401 kb on - strand, within GFF1687
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 320,732 + -0.2 322,330 + GFF1685 0.90 -1.4 322,330 + GFF1685 0.90 -0.9 322,330 + GFF1685 0.90 -1.4 322,330 + GFF1685 0.90 -1.6 322,330 + GFF1685 0.90 -1.7 322,331 - GFF1685 0.90 -1.4 323,063 + +0.1 323,200 + GFF1687 0.13 -0.9 323,200 + GFF1687 0.13 -1.2 323,200 + GFF1687 0.13 -1.3 323,205 + GFF1687 0.13 -1.0 323,205 + GFF1687 0.13 +0.5 323,205 + GFF1687 0.13 -0.5 323,205 + GFF1687 0.13 +1.1 323,283 + GFF1687 0.21 -1.0 323,314 + GFF1687 0.24 +1.0 323,314 + GFF1687 0.24 +0.1 323,314 + GFF1687 0.24 -1.0 323,314 + GFF1687 0.24 +0.4 323,314 + GFF1687 0.24 +0.2 323,314 + GFF1687 0.24 -0.5 323,314 + GFF1687 0.24 -0.4 323,314 + GFF1687 0.24 +0.4 323,314 + GFF1687 0.24 -0.3 323,314 + GFF1687 0.24 -0.6 323,314 + GFF1687 0.24 -0.9 323,315 - GFF1687 0.24 -0.5 323,315 - GFF1687 0.24 +0.4 323,315 - GFF1687 0.24 -1.9 323,315 - GFF1687 0.24 -0.3 323,315 - GFF1687 0.24 -0.3 323,315 - GFF1687 0.24 +0.3 323,315 - GFF1687 0.24 -0.6 323,384 + GFF1687 0.30 -0.8 323,385 - GFF1687 0.30 -1.0 323,385 - GFF1687 0.30 -1.6 323,398 + GFF1687 0.32 +0.4 323,400 + GFF1687 0.32 -0.4 323,400 + GFF1687 0.32 +0.4 323,400 + GFF1687 0.32 +0.4 323,401 - GFF1687 0.32 -0.6
Or see this region's nucleotide sequence