Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1327 and GFF1328 are separated by 596 nucleotides GFF1328 and GFF1329 are separated by 79 nucleotides
GFF1327 - Hydroperoxy fatty acid reductase gpx1, at 586,992 to 587,522
GFF1327
GFF1328 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 588,119 to 588,565
GFF1328
GFF1329 - Chromosome partition protein Smc, at 588,645 to 592,154
GFF1329
Position (kb) 588
589 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.196 kb on + strand, within GFF1327 at 587.197 kb on - strand, within GFF1327 at 587.197 kb on - strand, within GFF1327 at 587.197 kb on - strand, within GFF1327 at 587.197 kb on - strand, within GFF1327 at 587.197 kb on - strand, within GFF1327 at 587.205 kb on + strand, within GFF1327 at 587.205 kb on + strand, within GFF1327 at 587.205 kb on + strand, within GFF1327 at 587.205 kb on + strand, within GFF1327 at 587.205 kb on + strand, within GFF1327 at 587.205 kb on + strand, within GFF1327 at 587.206 kb on - strand, within GFF1327 at 587.206 kb on - strand, within GFF1327 at 587.206 kb on - strand, within GFF1327 at 587.206 kb on - strand, within GFF1327 at 587.207 kb on + strand, within GFF1327 at 587.207 kb on + strand, within GFF1327 at 587.207 kb on + strand, within GFF1327 at 587.207 kb on + strand, within GFF1327 at 587.207 kb on + strand, within GFF1327 at 587.207 kb on + strand, within GFF1327 at 587.207 kb on + strand, within GFF1327 at 587.207 kb on + strand, within GFF1327 at 587.208 kb on - strand, within GFF1327 at 587.213 kb on + strand, within GFF1327 at 587.213 kb on + strand, within GFF1327 at 587.214 kb on - strand, within GFF1327 at 587.304 kb on + strand, within GFF1327 at 587.322 kb on - strand, within GFF1327 at 587.322 kb on - strand, within GFF1327 at 587.368 kb on - strand, within GFF1327 at 587.421 kb on + strand, within GFF1327 at 587.421 kb on + strand, within GFF1327 at 587.421 kb on + strand, within GFF1327 at 587.452 kb on - strand, within GFF1327 at 587.459 kb on + strand, within GFF1327 at 587.459 kb on + strand, within GFF1327 at 587.459 kb on + strand, within GFF1327 at 587.460 kb on - strand, within GFF1327 at 587.465 kb on + strand, within GFF1327 at 587.465 kb on + strand, within GFF1327 at 587.466 kb on - strand, within GFF1327 at 587.520 kb on + strand at 587.520 kb on + strand at 587.520 kb on + strand at 587.521 kb on - strand at 587.576 kb on - strand at 587.588 kb on + strand at 587.589 kb on - strand at 587.589 kb on - strand at 587.589 kb on - strand at 587.590 kb on + strand at 587.612 kb on + strand at 587.712 kb on + strand at 587.712 kb on + strand at 587.712 kb on + strand at 587.712 kb on + strand at 587.770 kb on + strand at 587.964 kb on + strand at 587.970 kb on + strand at 587.970 kb on + strand at 587.979 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.983 kb on + strand at 587.984 kb on - strand at 587.984 kb on - strand at 587.984 kb on - strand at 587.987 kb on + strand at 587.987 kb on + strand at 587.987 kb on + strand at 587.988 kb on - strand at 587.989 kb on + strand at 588.003 kb on + strand at 588.003 kb on + strand at 588.012 kb on + strand at 588.012 kb on + strand at 588.012 kb on + strand at 588.012 kb on + strand at 588.013 kb on - strand at 588.013 kb on - strand at 588.015 kb on + strand at 588.015 kb on + strand at 588.015 kb on + strand at 588.016 kb on - strand at 588.022 kb on + strand at 588.038 kb on + strand at 588.039 kb on - strand at 588.128 kb on + strand at 588.128 kb on + strand at 588.129 kb on - strand at 588.129 kb on - strand at 588.129 kb on - strand at 588.129 kb on - strand at 588.130 kb on + strand at 588.130 kb on + strand at 588.130 kb on + strand at 588.130 kb on + strand at 588.130 kb on + strand at 588.131 kb on - strand at 588.133 kb on + strand at 588.133 kb on + strand at 588.133 kb on + strand at 588.133 kb on + strand at 588.134 kb on - strand at 588.134 kb on - strand at 588.134 kb on - strand at 588.134 kb on - strand at 588.134 kb on - strand at 588.282 kb on - strand, within GFF1328 at 588.348 kb on + strand, within GFF1328 at 588.348 kb on + strand, within GFF1328 at 588.348 kb on + strand, within GFF1328 at 588.348 kb on + strand, within GFF1328 at 588.355 kb on + strand, within GFF1328 at 588.377 kb on + strand, within GFF1328 at 588.377 kb on + strand, within GFF1328 at 588.391 kb on + strand, within GFF1328 at 588.391 kb on + strand, within GFF1328 at 588.392 kb on - strand, within GFF1328 at 588.392 kb on - strand, within GFF1328 at 588.393 kb on + strand, within GFF1328 at 588.393 kb on + strand, within GFF1328 at 588.394 kb on - strand, within GFF1328 at 588.394 kb on - strand, within GFF1328 at 588.402 kb on + strand, within GFF1328 at 588.402 kb on + strand, within GFF1328 at 588.403 kb on - strand, within GFF1328 at 588.403 kb on - strand, within GFF1328 at 588.403 kb on - strand, within GFF1328 at 588.403 kb on - strand, within GFF1328 at 588.404 kb on + strand, within GFF1328 at 588.404 kb on + strand, within GFF1328 at 588.405 kb on - strand, within GFF1328 at 588.551 kb on + strand at 588.551 kb on + strand at 588.552 kb on - strand at 588.552 kb on - strand at 588.552 kb on - strand at 588.552 kb on - strand at 588.597 kb on + strand at 588.597 kb on + strand at 588.598 kb on - strand at 588.598 kb on - strand at 588.598 kb on - strand at 588.598 kb on - strand at 588.598 kb on - strand at 588.598 kb on - strand at 588.598 kb on - strand at 588.598 kb on - strand at 588.598 kb on - strand at 588.600 kb on - strand at 588.600 kb on - strand at 588.600 kb on - strand at 588.628 kb on + strand at 588.628 kb on + strand at 588.629 kb on - strand at 588.629 kb on - strand at 588.629 kb on - strand at 588.641 kb on + strand at 588.641 kb on + strand at 588.641 kb on + strand at 588.641 kb on + strand at 588.641 kb on + strand at 588.642 kb on - strand at 588.642 kb on - strand at 588.642 kb on - strand at 588.759 kb on - strand at 588.866 kb on + strand at 588.867 kb on - strand at 588.867 kb on - strand at 588.867 kb on - strand at 588.961 kb on + strand at 588.987 kb on + strand at 588.987 kb on + strand at 588.987 kb on + strand at 588.987 kb on + strand at 588.987 kb on + strand at 588.987 kb on + strand at 588.988 kb on - strand at 588.988 kb on - strand at 588.988 kb on - strand at 588.988 kb on - strand at 588.988 kb on - strand at 588.988 kb on - strand at 588.990 kb on + strand at 588.990 kb on + strand at 588.991 kb on - strand at 588.991 kb on - strand at 588.992 kb on + strand at 588.992 kb on + strand at 588.992 kb on + strand at 588.992 kb on + strand at 588.992 kb on + strand at 588.992 kb on + strand at 588.992 kb on + strand at 588.992 kb on + strand at 588.993 kb on - strand at 588.993 kb on - strand at 588.993 kb on - strand at 588.995 kb on + strand at 588.995 kb on + strand at 588.995 kb on + strand at 588.996 kb on - strand, within GFF1329 at 588.996 kb on - strand, within GFF1329 at 588.996 kb on - strand, within GFF1329 at 588.996 kb on - strand, within GFF1329 at 588.996 kb on - strand, within GFF1329 at 588.996 kb on - strand, within GFF1329 at 588.998 kb on + strand, within GFF1329 at 588.998 kb on + strand, within GFF1329 at 588.999 kb on - strand, within GFF1329 at 588.999 kb on - strand, within GFF1329 at 589.097 kb on + strand, within GFF1329 at 589.098 kb on - strand, within GFF1329 at 589.130 kb on - strand, within GFF1329 at 589.161 kb on + strand, within GFF1329 at 589.161 kb on + strand, within GFF1329 at 589.163 kb on + strand, within GFF1329 at 589.163 kb on + strand, within GFF1329 at 589.202 kb on + strand, within GFF1329 at 589.202 kb on + strand, within GFF1329 at 589.202 kb on + strand, within GFF1329 at 589.202 kb on + strand, within GFF1329 at 589.203 kb on - strand, within GFF1329 at 589.203 kb on - strand, within GFF1329 at 589.203 kb on - strand, within GFF1329 at 589.233 kb on - strand, within GFF1329 at 589.296 kb on + strand, within GFF1329 at 589.317 kb on + strand, within GFF1329 at 589.375 kb on - strand, within GFF1329 at 589.558 kb on + strand, within GFF1329 at 589.558 kb on + strand, within GFF1329 at 589.559 kb on - strand, within GFF1329
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 587,196 + GFF1327 0.38 +0.6 587,196 + GFF1327 0.38 -0.6 587,196 + GFF1327 0.38 +0.3 587,196 + GFF1327 0.38 +0.3 587,196 + GFF1327 0.38 +0.4 587,196 + GFF1327 0.38 +0.9 587,196 + GFF1327 0.38 -0.4 587,196 + GFF1327 0.38 +0.4 587,196 + GFF1327 0.38 +0.4 587,196 + GFF1327 0.38 +0.4 587,196 + GFF1327 0.38 +1.0 587,196 + GFF1327 0.38 -0.5 587,196 + GFF1327 0.38 +1.5 587,196 + GFF1327 0.38 +0.4 587,196 + GFF1327 0.38 +0.3 587,196 + GFF1327 0.38 +0.2 587,197 - GFF1327 0.39 +0.9 587,197 - GFF1327 0.39 +0.4 587,197 - GFF1327 0.39 +0.2 587,197 - GFF1327 0.39 -0.4 587,197 - GFF1327 0.39 -0.1 587,205 + GFF1327 0.40 +0.4 587,205 + GFF1327 0.40 +0.6 587,205 + GFF1327 0.40 +0.2 587,205 + GFF1327 0.40 +1.1 587,205 + GFF1327 0.40 +0.9 587,205 + GFF1327 0.40 +1.2 587,206 - GFF1327 0.40 -0.3 587,206 - GFF1327 0.40 +0.6 587,206 - GFF1327 0.40 +0.8 587,206 - GFF1327 0.40 +1.0 587,207 + GFF1327 0.40 +1.2 587,207 + GFF1327 0.40 +0.6 587,207 + GFF1327 0.40 +0.5 587,207 + GFF1327 0.40 +0.8 587,207 + GFF1327 0.40 +0.2 587,207 + GFF1327 0.40 -0.8 587,207 + GFF1327 0.40 +0.7 587,207 + GFF1327 0.40 +0.1 587,208 - GFF1327 0.41 +0.8 587,213 + GFF1327 0.42 +0.8 587,213 + GFF1327 0.42 +0.1 587,214 - GFF1327 0.42 +0.6 587,304 + GFF1327 0.59 +0.8 587,322 - GFF1327 0.62 +0.9 587,322 - GFF1327 0.62 +0.2 587,368 - GFF1327 0.71 +0.3 587,421 + GFF1327 0.81 +0.7 587,421 + GFF1327 0.81 +0.5 587,421 + GFF1327 0.81 +0.4 587,452 - GFF1327 0.87 +1.0 587,459 + GFF1327 0.88 +0.4 587,459 + GFF1327 0.88 +1.3 587,459 + GFF1327 0.88 +0.0 587,460 - GFF1327 0.88 +0.1 587,465 + GFF1327 0.89 +1.6 587,465 + GFF1327 0.89 +0.2 587,466 - GFF1327 0.89 +1.0 587,520 + +0.1 587,520 + -0.3 587,520 + +0.5 587,521 - +0.2 587,576 - -0.7 587,588 + +0.3 587,589 - +0.8 587,589 - -1.6 587,589 - -1.7 587,590 + +0.1 587,612 + -1.3 587,712 + -0.6 587,712 + -0.3 587,712 + +0.0 587,712 + -1.0 587,770 + -1.0 587,964 + -1.5 587,970 + -0.3 587,970 + +0.0 587,979 + -0.5 587,983 + +0.4 587,983 + -0.3 587,983 + +0.5 587,983 + -0.3 587,983 + +0.6 587,983 + -0.7 587,983 + +0.0 587,983 + +0.9 587,983 + -3.2 587,983 + +0.7 587,983 + +0.6 587,983 + +0.4 587,984 - -0.8 587,984 - +1.0 587,984 - -1.3 587,987 + -1.0 587,987 + -1.3 587,987 + -1.6 587,988 - +0.0 587,989 + -1.0 588,003 + -0.5 588,003 + -0.4 588,012 + +0.6 588,012 + -0.8 588,012 + +0.2 588,012 + -0.9 588,013 - +0.2 588,013 - -2.9 588,015 + -0.3 588,015 + +0.7 588,015 + -1.9 588,016 - -0.1 588,022 + +0.1 588,038 + +0.8 588,039 - -0.6 588,128 + -0.4 588,128 + -1.0 588,129 - -1.0 588,129 - +0.1 588,129 - -1.2 588,129 - -0.9 588,130 + +0.4 588,130 + +0.4 588,130 + -0.9 588,130 + -1.3 588,130 + -1.0 588,131 - -0.3 588,133 + +1.0 588,133 + -0.3 588,133 + -0.9 588,133 + +0.3 588,134 - -1.1 588,134 - -0.2 588,134 - -1.0 588,134 - -0.8 588,134 - +0.3 588,282 - GFF1328 0.36 +0.0 588,348 + GFF1328 0.51 +1.0 588,348 + GFF1328 0.51 +0.0 588,348 + GFF1328 0.51 -1.3 588,348 + GFF1328 0.51 -1.3 588,355 + GFF1328 0.53 -2.2 588,377 + GFF1328 0.58 -0.8 588,377 + GFF1328 0.58 -1.2 588,391 + GFF1328 0.61 -1.0 588,391 + GFF1328 0.61 -0.8 588,392 - GFF1328 0.61 -1.0 588,392 - GFF1328 0.61 -1.0 588,393 + GFF1328 0.61 -1.0 588,393 + GFF1328 0.61 +1.0 588,394 - GFF1328 0.62 -1.0 588,394 - GFF1328 0.62 -0.3 588,402 + GFF1328 0.63 -1.6 588,402 + GFF1328 0.63 -0.3 588,403 - GFF1328 0.64 -1.3 588,403 - GFF1328 0.64 -2.5 588,403 - GFF1328 0.64 -0.3 588,403 - GFF1328 0.64 -0.6 588,404 + GFF1328 0.64 -1.3 588,404 + GFF1328 0.64 +0.6 588,405 - GFF1328 0.64 +0.0 588,551 + -1.0 588,551 + -1.6 588,552 - -1.0 588,552 - -0.3 588,552 - -0.3 588,552 - -1.7 588,597 + -0.3 588,597 + -0.6 588,598 - -0.6 588,598 - -2.0 588,598 - +0.6 588,598 - +0.0 588,598 - -0.2 588,598 - -1.0 588,598 - +0.5 588,598 - -0.3 588,598 - -0.6 588,600 - +0.2 588,600 - -0.8 588,600 - -0.6 588,628 + -0.2 588,628 + -0.2 588,629 - +0.7 588,629 - -1.5 588,629 - -0.2 588,641 + -0.1 588,641 + -0.3 588,641 + +0.0 588,641 + +0.6 588,641 + -1.7 588,642 - +0.3 588,642 - +0.0 588,642 - -0.5 588,759 - -1.0 588,866 + -0.3 588,867 - +0.3 588,867 - +0.7 588,867 - -1.0 588,961 + +1.2 588,987 + -0.2 588,987 + -0.5 588,987 + +0.0 588,987 + -0.5 588,987 + +0.6 588,987 + -0.6 588,988 - -0.6 588,988 - -0.3 588,988 - -1.0 588,988 - -0.5 588,988 - +0.6 588,988 - -0.2 588,990 + -0.2 588,990 + -1.0 588,991 - -0.3 588,991 - -0.6 588,992 + -0.9 588,992 + +1.0 588,992 + +0.4 588,992 + -0.5 588,992 + -0.7 588,992 + +0.0 588,992 + -1.0 588,992 + +0.2 588,993 - -2.6 588,993 - -0.4 588,993 - -1.3 588,995 + -0.6 588,995 + +0.0 588,995 + +0.3 588,996 - GFF1329 0.10 -2.5 588,996 - GFF1329 0.10 -0.4 588,996 - GFF1329 0.10 +0.1 588,996 - GFF1329 0.10 +1.0 588,996 - GFF1329 0.10 -0.2 588,996 - GFF1329 0.10 -0.7 588,998 + GFF1329 0.10 -0.7 588,998 + GFF1329 0.10 +0.2 588,999 - GFF1329 0.10 -0.7 588,999 - GFF1329 0.10 -1.0 589,097 + GFF1329 0.13 +0.4 589,098 - GFF1329 0.13 +0.1 589,130 - GFF1329 0.14 -1.0 589,161 + GFF1329 0.15 -0.5 589,161 + GFF1329 0.15 -0.4 589,163 + GFF1329 0.15 -1.8 589,163 + GFF1329 0.15 -0.0 589,202 + GFF1329 0.16 -0.1 589,202 + GFF1329 0.16 -1.8 589,202 + GFF1329 0.16 -1.6 589,202 + GFF1329 0.16 -0.3 589,203 - GFF1329 0.16 -0.4 589,203 - GFF1329 0.16 -0.2 589,203 - GFF1329 0.16 -1.3 589,233 - GFF1329 0.17 +0.0 589,296 + GFF1329 0.19 +0.2 589,317 + GFF1329 0.19 -0.2 589,375 - GFF1329 0.21 -0.3 589,558 + GFF1329 0.26 +0.0 589,558 + GFF1329 0.26 -0.3 589,559 - GFF1329 0.26 -1.0
Or see this region's nucleotide sequence